RNA–Protein interactions for RNA: ENST00000636271.1

CHRNA7-212, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 1,974 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-212ENST00000636271 MGAT3Q09327 533 aa16.74■□□□□ 0.27
CHRNA7-212ENST00000636271 C15orf39Q6ZRI6 1047 aa16.74■□□□□ 0.27
CHRNA7-212ENST00000636271 ENOSF1Q7L5Y1 443 aa16.74■□□□□ 0.27
CHRNA7-212ENST00000636271 RSPH3Q86UC2 560 aa16.74■□□□□ 0.27
CHRNA7-212ENST00000636271 CARD9Q9H257 536 aa16.74■□□□□ 0.27
CHRNA7-212ENST00000636271 PDZD7Q9H5P4 517 aa16.74■□□□□ 0.27
CHRNA7-212ENST00000636271 ACP6Q9NPH0 428 aa16.74■□□□□ 0.27
CHRNA7-212ENST00000636271 A0A1B0GUA9 196 aa16.73■□□□□ 0.27
CHRNA7-212ENST00000636271 SART1O43290 800 aaKnown RBP16.73■□□□□ 0.27
CHRNA7-212ENST00000636271 GJA8P48165 433 aa16.73■□□□□ 0.27
CHRNA7-212ENST00000636271 ATN1P54259 1190 aaPredicted RBP16.73■□□□□ 0.27
CHRNA7-212ENST00000636271 WNT7BP56706 349 aa16.73■□□□□ 0.27
CHRNA7-212ENST00000636271 CDR2Q01850 454 aa16.73■□□□□ 0.27
CHRNA7-212ENST00000636271 PSMD6Q15008 389 aa16.73■□□□□ 0.27
CHRNA7-212ENST00000636271 TMEM132AQ24JP5 1023 aa16.73■□□□□ 0.27
CHRNA7-212ENST00000636271 DCAF12L1Q5VU92 463 aa16.73■□□□□ 0.27
CHRNA7-212ENST00000636271 MPZL3Q6UWV2 235 aa16.73■□□□□ 0.27
CHRNA7-212ENST00000636271 CATSPER4Q7RTX7 472 aa16.73■□□□□ 0.27
CHRNA7-212ENST00000636271 CEP120Q8N960 986 aa16.73■□□□□ 0.27
CHRNA7-212ENST00000636271 EIF1ADQ8N9N8 165 aaKnown RBP16.73■□□□□ 0.27
CHRNA7-212ENST00000636271 TSEN2Q8NCE0 465 aaKnown RBP16.73■□□□□ 0.27
CHRNA7-212ENST00000636271 RIN2Q8WYP3 895 aaPredicted RBP16.73■□□□□ 0.27
CHRNA7-212ENST00000636271 TATDN2Q93075 761 aa16.73■□□□□ 0.27
CHRNA7-212ENST00000636271 TRPV2Q9Y5S1 764 aa16.73■□□□□ 0.27
CHRNA7-212ENST00000636271 KIAA0100Q14667 2235 aaKnown RBP16.73■□□□□ 0.27
CHRNA7-212ENST00000636271 CLSTN1O94985 981 aa16.73■□□□□ 0.27
CHRNA7-212ENST00000636271 TNFSF9P41273 254 aa16.73■□□□□ 0.27
CHRNA7-212ENST00000636271 ZNF568Q3ZCX4 644 aa16.73■□□□□ 0.27
CHRNA7-212ENST00000636271 ALS2CLQ60I27 953 aa16.73■□□□□ 0.27
CHRNA7-212ENST00000636271 FAM126BQ8IXS8 530 aa16.73■□□□□ 0.27
CHRNA7-212ENST00000636271 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.73■□□□□ 0.27
CHRNA7-212ENST00000636271 ZNF516Q92618 1163 aa16.73■□□□□ 0.27
CHRNA7-212ENST00000636271 FAM81BQ96LP2 452 aa16.73■□□□□ 0.27
CHRNA7-212ENST00000636271 FNBP1Q96RU3 617 aa16.73■□□□□ 0.27
CHRNA7-212ENST00000636271 DDX47Q9H0S4 455 aaKnown RBP16.73■□□□□ 0.27
CHRNA7-212ENST00000636271 CDT1Q9H211 546 aa16.73■□□□□ 0.27
CHRNA7-212ENST00000636271 SLITRK6Q9H5Y7 841 aa16.73■□□□□ 0.27
CHRNA7-212ENST00000636271 FAM204AQ9H8W3 233 aa16.73■□□□□ 0.27
CHRNA7-212ENST00000636271 C1orf112Q9NSG2 853 aa16.73■□□□□ 0.27
CHRNA7-212ENST00000636271 ALG6Q9Y672 507 aa16.73■□□□□ 0.27
CHRNA7-212ENST00000636271 ERICH4A6NGS2 130 aa16.72■□□□□ 0.27
CHRNA7-212ENST00000636271 MIF4GDA9UHW6 222 aaKnown RBP16.72■□□□□ 0.27
CHRNA7-212ENST00000636271 M0QZ92 97 aa16.72■□□□□ 0.27
CHRNA7-212ENST00000636271 MTA2O94776 668 aa16.72■□□□□ 0.27
CHRNA7-212ENST00000636271 FGGP02679 453 aa16.72■□□□□ 0.27
CHRNA7-212ENST00000636271 ITGA4P13612 1032 aa16.72■□□□□ 0.27
CHRNA7-212ENST00000636271 LMAN1P49257 510 aa16.72■□□□□ 0.27
CHRNA7-212ENST00000636271 ZNF618Q5T7W0 954 aa16.72■□□□□ 0.27
CHRNA7-212ENST00000636271 FAM228AQ86W67 206 aa16.72■□□□□ 0.27
CHRNA7-212ENST00000636271 WHAMMQ8TF30 809 aa16.72■□□□□ 0.27
CHRNA7-212ENST00000636271 RNPC3Q96LT9 517 aaKnown RBP16.72■□□□□ 0.27
CHRNA7-212ENST00000636271 PI4K2AQ9BTU6 479 aa16.72■□□□□ 0.27
CHRNA7-212ENST00000636271 MCOLN1Q9GZU1 580 aa16.72■□□□□ 0.27
CHRNA7-212ENST00000636271 HSF2BPO75031 334 aa16.71■□□□□ 0.27
CHRNA7-212ENST00000636271 FAM153BP0C7A2 387 aa16.71■□□□□ 0.27
CHRNA7-212ENST00000636271 COL6A1P12109 1028 aa16.71■□□□□ 0.27
CHRNA7-212ENST00000636271 CUL1Q13616 776 aa16.71■□□□□ 0.27
CHRNA7-212ENST00000636271 CLUL1Q15846 466 aa16.71■□□□□ 0.27
CHRNA7-212ENST00000636271 ZACNQ401N2 412 aa16.71■□□□□ 0.27
CHRNA7-212ENST00000636271 FAM153CQ494X1 144 aa16.71■□□□□ 0.27
CHRNA7-212ENST00000636271 TMEM192Q8IY95 271 aa16.71■□□□□ 0.27
CHRNA7-212ENST00000636271 THNSL1Q8IYQ7 743 aa16.71■□□□□ 0.27
CHRNA7-212ENST00000636271 GOLGA6L1Q8N7Z2 621 aa16.71■□□□□ 0.27
CHRNA7-212ENST00000636271 DDX1Q92499 740 aaKnown RBP16.71■□□□□ 0.27
CHRNA7-212ENST00000636271 ELMO3Q96BJ8 720 aa16.71■□□□□ 0.27
CHRNA7-212ENST00000636271 FAM84AQ96KN4 292 aa16.71■□□□□ 0.27
CHRNA7-212ENST00000636271 NAP1L3Q99457 506 aaPredicted RBP16.71■□□□□ 0.27
CHRNA7-212ENST00000636271 AGO3Q9H9G7 860 aaKnown RBP16.71■□□□□ 0.27
CHRNA7-212ENST00000636271 FAM153AQ9UHL3 310 aa16.71■□□□□ 0.27
CHRNA7-212ENST00000636271 LDHAP00338 332 aaKnown RBP16.71■□□□□ 0.27
CHRNA7-212ENST00000636271 CD4P01730 458 aa16.71■□□□□ 0.27
CHRNA7-212ENST00000636271 CKBP12277 381 aa16.71■□□□□ 0.27
CHRNA7-212ENST00000636271 KRT5P13647 590 aa16.71■□□□□ 0.27
CHRNA7-212ENST00000636271 TNNI1P19237 187 aa16.71■□□□□ 0.27
CHRNA7-212ENST00000636271 OSTNP61366 133 aa16.71■□□□□ 0.27
CHRNA7-212ENST00000636271 TRADDQ15628 312 aa16.71■□□□□ 0.27
CHRNA7-212ENST00000636271 TRAF7Q6Q0C0 670 aa16.71■□□□□ 0.27
CHRNA7-212ENST00000636271 MREGQ8N565 214 aa16.71■□□□□ 0.27
CHRNA7-212ENST00000636271 UBL4BQ8N7F7 174 aa16.71■□□□□ 0.27
CHRNA7-212ENST00000636271 CCDC26Q8TAB7 109 aa16.71■□□□□ 0.27
CHRNA7-212ENST00000636271 ALG3Q92685 438 aa16.71■□□□□ 0.27
CHRNA7-212ENST00000636271 RPS6KC1Q96S38 1066 aa16.71■□□□□ 0.27
CHRNA7-212ENST00000636271 BHMG1C9JSJ3 638 aaPredicted RBP16.7■□□□□ 0.26
CHRNA7-212ENST00000636271 OGTO15294 1046 aa16.7■□□□□ 0.26
CHRNA7-212ENST00000636271 ATMINO43313 823 aaPredicted RBP16.7■□□□□ 0.26
CHRNA7-212ENST00000636271 OPA1O60313 960 aa16.7■□□□□ 0.26
CHRNA7-212ENST00000636271 PQBP1O60828 265 aaKnown RBP16.7■□□□□ 0.26
CHRNA7-212ENST00000636271 C4BPAP04003 597 aaKnown RBP16.7■□□□□ 0.26
CHRNA7-212ENST00000636271 CYP1A2P05177 515 aa16.7■□□□□ 0.26
CHRNA7-212ENST00000636271 PCBP1Q15365 356 aaKnown RBP eCLIP16.7■□□□□ 0.26
CHRNA7-212ENST00000636271 WDR44Q5JSH3 913 aa16.7■□□□□ 0.26
CHRNA7-212ENST00000636271 LMBRD2Q68DH5 695 aaPredicted RBP16.7■□□□□ 0.26
CHRNA7-212ENST00000636271 SLC39A5Q6ZMH5 540 aa16.7■□□□□ 0.26
CHRNA7-212ENST00000636271 MAATS1Q7Z4T9 603 aa16.7■□□□□ 0.26
CHRNA7-212ENST00000636271 RUFY1Q96T51 708 aa16.7■□□□□ 0.26
CHRNA7-212ENST00000636271 SH3GL2Q99962 352 aa16.7■□□□□ 0.26
CHRNA7-212ENST00000636271 EIF2AQ9BY44 585 aaKnown RBP16.7■□□□□ 0.26
CHRNA7-212ENST00000636271 RBAKQ9NYW8 714 aaPredicted RBP16.7■□□□□ 0.26
CHRNA7-212ENST00000636271 AMACRQ9UHK6 382 aa16.7■□□□□ 0.26
CHRNA7-212ENST00000636271 GTF3C4Q9UKN8 822 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms