RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 PRPF40AO75400 957 aaKnown RBP16.92■□□□□ 0.3
LINC00339-207ENST00000634712 RHOBTB3O94955 611 aa16.92■□□□□ 0.3
LINC00339-207ENST00000634712 PAPLNO95428 1278 aa16.92■□□□□ 0.3
LINC00339-207ENST00000634712 DLATP10515 647 aaKnown RBP16.92■□□□□ 0.3
LINC00339-207ENST00000634712 ADCY1Q08828 1119 aa16.92■□□□□ 0.3
LINC00339-207ENST00000634712 LMBRD2Q68DH5 695 aaPredicted RBP16.92■□□□□ 0.3
LINC00339-207ENST00000634712 GRASPQ7Z6J2 395 aaPredicted RBP16.92■□□□□ 0.3
LINC00339-207ENST00000634712 C12orf56Q8IXR9 622 aa16.92■□□□□ 0.3
LINC00339-207ENST00000634712 FMR1NBQ8N0W7 255 aaPredicted RBP16.92■□□□□ 0.3
LINC00339-207ENST00000634712 MTMR12Q9C0I1 747 aa16.92■□□□□ 0.3
LINC00339-207ENST00000634712 INTS13Q9NVM9 706 aa16.92■□□□□ 0.3
LINC00339-207ENST00000634712 CALUO43852 315 aaPredicted RBP16.91■□□□□ 0.3
LINC00339-207ENST00000634712 CYP11A1P05108 521 aa16.91■□□□□ 0.3
LINC00339-207ENST00000634712 FSHRP23945 695 aa16.91■□□□□ 0.3
LINC00339-207ENST00000634712 FAM160A1Q05DH4 1040 aa16.91■□□□□ 0.3
LINC00339-207ENST00000634712 BFSP1Q12934 665 aa16.91■□□□□ 0.3
LINC00339-207ENST00000634712 MYO1EQ12965 1108 aa16.91■□□□□ 0.3
LINC00339-207ENST00000634712 MYBPC2Q14324 1141 aa16.91■□□□□ 0.3
LINC00339-207ENST00000634712 KCNB1Q14721 858 aa16.91■□□□□ 0.3
LINC00339-207ENST00000634712 GET4Q7L5D6 327 aaPredicted RBP16.91■□□□□ 0.3
LINC00339-207ENST00000634712 WDR49Q8IV35 697 aa16.91■□□□□ 0.3
LINC00339-207ENST00000634712 TCEAL8Q8IYN2 117 aa16.91■□□□□ 0.3
LINC00339-207ENST00000634712 ELMOD1Q8N336 334 aa16.91■□□□□ 0.3
LINC00339-207ENST00000634712 LRRC52Q8N7C0 313 aa16.91■□□□□ 0.3
LINC00339-207ENST00000634712 EDAQ92838 391 aa16.91■□□□□ 0.3
LINC00339-207ENST00000634712 CCDC127Q96BQ5 260 aa16.91■□□□□ 0.3
LINC00339-207ENST00000634712 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.91■□□□□ 0.3
LINC00339-207ENST00000634712 C2orf16Q68DN1 1984 aa16.91■□□□□ 0.3
LINC00339-207ENST00000634712 FAM86C2PA6NEL3 165 aa16.9■□□□□ 0.3
LINC00339-207ENST00000634712 PDXKO00764 312 aa16.9■□□□□ 0.3
LINC00339-207ENST00000634712 GPR37L1O60883 481 aa16.9■□□□□ 0.3
LINC00339-207ENST00000634712 HUS1O60921 280 aa16.9■□□□□ 0.3
LINC00339-207ENST00000634712 POU2F2P09086 479 aa16.9■□□□□ 0.3
LINC00339-207ENST00000634712 OR4Q2P0C623 313 aa16.9■□□□□ 0.3
LINC00339-207ENST00000634712 CYP24A1Q07973 514 aa16.9■□□□□ 0.3
LINC00339-207ENST00000634712 PSMD6Q15008 389 aa16.9■□□□□ 0.3
LINC00339-207ENST00000634712 PTPN21Q16825 1174 aa16.9■□□□□ 0.3
LINC00339-207ENST00000634712 RNF19BQ6ZMZ0 732 aa16.9■□□□□ 0.3
LINC00339-207ENST00000634712 RMND1Q9NWS8 449 aa16.9■□□□□ 0.3
LINC00339-207ENST00000634712 CHMP5Q9NZZ3 219 aa16.9■□□□□ 0.3
LINC00339-207ENST00000634712 SCN1AP35498 2009 aa16.9■□□□□ 0.3
LINC00339-207ENST00000634712 SMC2O95347 1197 aa16.89■□□□□ 0.3
LINC00339-207ENST00000634712 SEC24AO95486 1093 aa16.89■□□□□ 0.3
LINC00339-207ENST00000634712 PTPN2P17706 415 aa16.89■□□□□ 0.3
LINC00339-207ENST00000634712 ZXDAP98168 799 aa16.89■□□□□ 0.3
LINC00339-207ENST00000634712 GPR17Q13304 367 aa16.89■□□□□ 0.3
LINC00339-207ENST00000634712 PNOCQ13519 176 aa16.89■□□□□ 0.3
LINC00339-207ENST00000634712 PABPC1LQ4VXU2 614 aaKnown RBP16.89■□□□□ 0.3
LINC00339-207ENST00000634712 WSCD1Q658N2 575 aa16.89■□□□□ 0.3
LINC00339-207ENST00000634712 IQCEQ6IPM2 695 aa16.89■□□□□ 0.3
LINC00339-207ENST00000634712 OR5B17Q8NGF7 314 aa16.89■□□□□ 0.3
LINC00339-207ENST00000634712 BORCS6Q96GS4 357 aa16.89■□□□□ 0.3
LINC00339-207ENST00000634712 FAM84AQ96KN4 292 aa16.89■□□□□ 0.3
LINC00339-207ENST00000634712 ZNF512Q96ME7 567 aaPredicted RBP16.89■□□□□ 0.3
LINC00339-207ENST00000634712 PGLYRP2Q96PD5 576 aa16.89■□□□□ 0.3
LINC00339-207ENST00000634712 CGRRF1Q99675 332 aa16.89■□□□□ 0.3
LINC00339-207ENST00000634712 KCTD10Q9H3F6 313 aa16.89■□□□□ 0.3
LINC00339-207ENST00000634712 SORCS3Q9UPU3 1222 aa16.89■□□□□ 0.3
LINC00339-207ENST00000634712 MAPK8IP1Q9UQF2 711 aa16.89■□□□□ 0.3
LINC00339-207ENST00000634712 FRMD4BQ9Y2L6 1034 aa16.89■□□□□ 0.3
LINC00339-207ENST00000634712 INSL5Q9Y5Q6 135 aa16.89■□□□□ 0.3
LINC00339-207ENST00000634712 SNX9Q9Y5X1 595 aa16.89■□□□□ 0.3
LINC00339-207ENST00000634712 NR3C1P04150 777 aa16.89■□□□□ 0.29
LINC00339-207ENST00000634712 ASGR2P07307 311 aa16.89■□□□□ 0.29
LINC00339-207ENST00000634712 NTHL1P78549 312 aa16.89■□□□□ 0.29
LINC00339-207ENST00000634712 SNW1Q13573 536 aaKnown RBP16.89■□□□□ 0.29
LINC00339-207ENST00000634712 MTMR3Q13615 1198 aa16.89■□□□□ 0.29
LINC00339-207ENST00000634712 TRAPPC11Q7Z392 1133 aa16.89■□□□□ 0.29
LINC00339-207ENST00000634712 SLC9A9Q8IVB4 645 aa16.89■□□□□ 0.29
LINC00339-207ENST00000634712 ENGASEQ8NFI3 743 aa16.89■□□□□ 0.29
LINC00339-207ENST00000634712 HPDLQ96IR7 371 aa16.89■□□□□ 0.29
LINC00339-207ENST00000634712 MFSD14AQ96MC6 490 aa16.89■□□□□ 0.29
LINC00339-207ENST00000634712 TIGD1Q96MW7 591 aa16.89■□□□□ 0.29
LINC00339-207ENST00000634712 MYADMQ96S97 322 aa16.89■□□□□ 0.29
LINC00339-207ENST00000634712 DNMT3BQ9UBC3 853 aaKnown RBP16.89■□□□□ 0.29
LINC00339-207ENST00000634712 SIX4Q9UIU6 781 aa16.89■□□□□ 0.29
LINC00339-207ENST00000634712 ZFP37Q9Y6Q3 630 aaPredicted RBP16.89■□□□□ 0.29
LINC00339-207ENST00000634712 MYO10Q9HD67 2058 aa16.88■□□□□ 0.29
LINC00339-207ENST00000634712 KINO60870 393 aaKnown RBP16.88■□□□□ 0.29
LINC00339-207ENST00000634712 PHACTR2O75167 634 aa16.88■□□□□ 0.29
LINC00339-207ENST00000634712 ALDH1A3P47895 512 aa16.88■□□□□ 0.29
LINC00339-207ENST00000634712 TWF1Q12792 350 aa16.88■□□□□ 0.29
LINC00339-207ENST00000634712 DUSP4Q13115 394 aa16.88■□□□□ 0.29
LINC00339-207ENST00000634712 PLD1Q13393 1074 aa16.88■□□□□ 0.29
LINC00339-207ENST00000634712 TRPC3Q13507 836 aa16.88■□□□□ 0.29
LINC00339-207ENST00000634712 SLC39A12Q504Y0 691 aa16.88■□□□□ 0.29
LINC00339-207ENST00000634712 CEP135Q66GS9 1140 aa16.88■□□□□ 0.29
LINC00339-207ENST00000634712 UBALD2Q8IYN6 164 aa16.88■□□□□ 0.29
LINC00339-207ENST00000634712 DCP1BQ8IZD4 617 aaKnown RBP16.88■□□□□ 0.29
LINC00339-207ENST00000634712 TMEM86AQ8N2M4 240 aa16.88■□□□□ 0.29
LINC00339-207ENST00000634712 GUF1Q8N442 669 aaKnown RBP16.88■□□□□ 0.29
LINC00339-207ENST00000634712 SMARCE1Q969G3 411 aa16.88■□□□□ 0.29
LINC00339-207ENST00000634712 CORO1BQ9BR76 489 aa16.88■□□□□ 0.29
LINC00339-207ENST00000634712 LRFN3Q9BTN0 628 aa16.88■□□□□ 0.29
LINC00339-207ENST00000634712 DMAC2Q9NW81 257 aa16.88■□□□□ 0.29
LINC00339-207ENST00000634712 HCFC1R1Q9NWW0 138 aa16.88■□□□□ 0.29
LINC00339-207ENST00000634712 GDAP2Q9NXN4 497 aa16.88■□□□□ 0.29
LINC00339-207ENST00000634712 IGSF9Q9P2J2 1179 aa16.88■□□□□ 0.29
LINC00339-207ENST00000634712 MRPS23Q9Y3D9 190 aaKnown RBP16.88■□□□□ 0.29
LINC00339-207ENST00000634712 PTPRJQ12913 1337 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms