RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 TMPRSS9Q7Z410 1059 aa3.8□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 PNMA8AQ86V59 439 aaPredicted RBP3.8□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 SRRM1Q8IYB3 904 aaKnown RBP3.8□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 SNX19Q92543 992 aa3.8□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 OSBPL9Q96SU4 736 aa3.8□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 FAM126AQ9BYI3 521 aaPredicted RBP3.8□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 WDCPQ9H6R7 721 aa3.8□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 CTTNBP2NLQ9P2B4 639 aa3.8□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 HSFX1Q9UBD0 423 aa3.8□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 ZDHHC8Q9ULC8 765 aa3.8□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 AATKQ6ZMQ8 1374 aa3.79□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 SBNO2Q9Y2G9 1366 aa3.79□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 CCDC154A6NI56 674 aa3.79□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 PRSS23O95084 383 aa3.79□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 MT-CO1P00395 513 aa3.79□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 GNAI3P08754 354 aa3.79□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 RECQLP46063 649 aaPredicted RBP3.79□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 GNAI1P63096 354 aa3.79□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 ITKQ08881 620 aa3.79□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 TCF15Q12870 199 aa3.79□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 TEDDM1Q5T9Z0 273 aa3.79□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 MIER2Q8N344 545 aa3.79□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 DPF2Q92785 391 aa3.79□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 CLPTM1LQ96KA5 538 aa3.79□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 SLC2A13Q96QE2 648 aa3.79□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 SMOQ99835 787 aa3.79□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 CNPPD1Q9BV87 410 aa3.79□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 ALG8Q9BVK2 526 aa3.79□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 YY2O15391 372 aa3.78□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 ZFPL1O95159 310 aa3.78□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 SLC6A4P31645 630 aa3.78□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 GRIA3P42263 894 aa3.78□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 KIF23Q02241 960 aaPredicted RBP3.78□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 FPGSQ05932 587 aa3.78□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 SF3B3Q15393 1217 aaKnown RBP3.78□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 ABCB5Q2M3G0 1257 aa3.78□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 PREPLQ4J6C6 727 aaPredicted RBP3.78□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 SLC4A10Q6U841 1118 aa3.78□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 C1QL2Q7Z5L3 287 aa3.78□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 ADGRG5Q8IZF4 528 aa3.78□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 CFAP52Q8N1V2 620 aa3.78□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 PPM1NQ8N819 430 aa3.78□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 PRPF38AQ8NAV1 312 aaKnown RBP3.78□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 C3orf20Q8ND61 904 aa3.78□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 SARAFQ96BY9 339 aa3.78□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 MTMR8Q96EF0 704 aa3.78□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 PBKQ96KB5 322 aa3.78□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 KLHL32Q96NJ5 620 aa3.78□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 NUP88Q99567 741 aaPredicted RBP3.78□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 GPR35Q9HC97 309 aa3.78□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 KIAA1586Q9HCI6 787 aa3.78□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 CDYLQ9Y232 598 aa3.78□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 PCDHA13Q9Y5I0 950 aa3.78□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 CCDC78A2IDD5 438 aa3.77□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 TRIAP1O43715 76 aa3.77□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 PCDHGA12O60330 932 aa3.77□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 SUN1O94901 812 aa3.77□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 IGLV2-14P01704 120 aa3.77□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 MALP21145 153 aa3.77□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 EDNRBP24530 442 aa3.77□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 AKAP5P24588 427 aa3.77□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 ABCG1P45844 678 aa3.77□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 AMPD3Q01432 767 aa3.77□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 KIF22Q14807 665 aa3.77□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 C3orf36Q3SXR2 165 aa3.77□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 KAZNQ674X7 775 aa3.77□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 POC1BQ8TC44 478 aa3.77□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 TMEM125Q96AQ2 219 aa3.77□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 NELL2Q99435 816 aa3.77□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 BRD9Q9H8M2 597 aa3.77□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 TCF7L1Q9HCS4 588 aa3.77□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 KLC4Q9NSK0 619 aa3.77□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 TYW1Q9NV66 732 aaKnown RBP3.77□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 ARPP21Q9UBL0 812 aaPredicted RBP3.77□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 FEZ2Q9UHY8 353 aaPredicted RBP3.77□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 LIMCH1Q9UPQ0 1083 aa3.77□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 PCDHB1Q9Y5F3 818 aa3.77□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 PCDHGA9Q9Y5G4 932 aaKnown RBP3.77□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 PCDHGA8Q9Y5G5 932 aa3.77□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 PCDHGA7Q9Y5G6 932 aa3.77□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 PCDHGA6Q9Y5G7 932 aa3.77□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 PCDHGA3Q9Y5H0 932 aa3.77□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 WDR27A2RRH5 827 aa3.76□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 NT5C1B-RDH14C9J2C7 533 aa3.76□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 TOR1BO14657 336 aa3.76□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 NXPH3O95157 252 aa3.76□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 RARBP10826 455 aa3.76□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 GPD1P21695 349 aa3.76□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 CCND1P24385 295 aa3.76□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 NPTX2P47972 431 aa3.76□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 PIK3CGP48736 1102 aa3.76□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 CDKN1CP49918 316 aaPredicted RBP3.76□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 UAP1L1Q3KQV9 507 aa3.76□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 CCDC93Q567U6 631 aa3.76□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 SFRP4Q6FHJ7 346 aaPredicted RBP3.76□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 TAPT1Q6NXT6 567 aa3.76□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.76□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 PDPRQ8NCN5 879 aa3.76□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 B3GALNT2Q8NCR0 500 aa3.76□□□□□ -1.81
NPHP3-ACAD11-202ENST00000632629 FBXL20Q96IG2 436 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms