RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 C1orf131Q8NDD1 294 aaKnown RBP5.92□□□□□ -1.46
NEK3-211ENST00000629912 IFT81Q8WYA0 676 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 ZBTB10Q96DT7 871 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 ZNF668Q96K58 619 aaPredicted RBP5.92□□□□□ -1.46
NEK3-211ENST00000629912 ACAP3Q96P50 834 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 SH3GL2Q99962 352 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 ADPGKQ9BRR6 497 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 ERP44Q9BS26 406 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 GCOM2Q9BZD3 368 aaPredicted RBP5.92□□□□□ -1.46
NEK3-211ENST00000629912 AP5M1Q9H0R1 490 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 DDX47Q9H0S4 455 aaKnown RBP5.92□□□□□ -1.46
NEK3-211ENST00000629912 LRRC19Q9H756 370 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 ZFYVE28Q9HCC9 887 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 HOMER3Q9NSC5 361 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 SETD4Q9NVD3 440 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 FLRT1Q9NZU1 646 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 IP6K2Q9UHH9 426 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 AMACRQ9UHK6 382 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 ANAPC7Q9UJX3 599 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 ITGA11Q9UKX5 1188 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 ZHX1Q9UKY1 873 aaPredicted RBP5.92□□□□□ -1.46
NEK3-211ENST00000629912 MTUS1Q9ULD2 1270 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 NFU1Q9UMS0 254 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 UTP11Q9Y3A2 253 aaKnown RBP5.92□□□□□ -1.46
NEK3-211ENST00000629912 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.92□□□□□ -1.46
NEK3-211ENST00000629912 NR2E1Q9Y466 385 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 TRIP12Q14669 1992 aaPredicted RBP5.92□□□□□ -1.46
NEK3-211ENST00000629912 UTRNP46939 3433 aa5.92□□□□□ -1.46
NEK3-211ENST00000629912 SIGLEC16A6NMB1 481 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 ADCY6O43306 1168 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 ATMINO43313 823 aaPredicted RBP5.91□□□□□ -1.46
NEK3-211ENST00000629912 PSTPIP1O43586 416 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 HSF2BPO75031 334 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 CAPN15O75808 1086 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 ERLIN2O94905 339 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 NFICP08651 508 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 SLC10A3P09131 477 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 WEE2P0C1S8 567 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 RARAP10276 462 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 VDRP11473 427 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 ECHS1P30084 290 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 POLR2BP30876 1174 aaKnown RBP5.91□□□□□ -1.46
NEK3-211ENST00000629912 HOXC8P31273 242 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 COILP38432 576 aaPredicted RBP5.91□□□□□ -1.46
NEK3-211ENST00000629912 GABRB2P47870 512 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 CPT1AP50416 773 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 RAD23BP54727 409 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 GSCP56915 257 aaPredicted RBP5.91□□□□□ -1.46
NEK3-211ENST00000629912 OSTNP61366 133 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 NKX3-2P78367 333 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 ZNF211Q13398 564 aaPredicted RBP5.91□□□□□ -1.46
NEK3-211ENST00000629912 ZNF268Q14587 947 aaPredicted RBP5.91□□□□□ -1.46
NEK3-211ENST00000629912 MFSD10Q14728 455 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 TMEM132DQ14C87 1099 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 SIX1Q15475 284 aaPredicted RBP5.91□□□□□ -1.46
NEK3-211ENST00000629912 TAF1CQ15572 869 aaPredicted RBP5.91□□□□□ -1.46
NEK3-211ENST00000629912 TRADDQ15628 312 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 CNGA2Q16280 664 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 PTPROQ16827 1216 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 PPP1R15BQ5SWA1 713 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 EMC10Q5UCC4 262 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 SLC27A1Q6PCB7 646 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 SYDE1Q6ZW31 735 aaPredicted RBP5.91□□□□□ -1.46
NEK3-211ENST00000629912 SAPCD2Q86UD0 394 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 CDR2LQ86X02 465 aaPredicted RBP5.91□□□□□ -1.46
NEK3-211ENST00000629912 ERICH1Q86X53 443 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 RHOT1Q8IXI2 618 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 KATNAL2Q8IYT4 538 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 RCOR2Q8IZ40 523 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 ZDHHC14Q8IZN3 488 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 SLC4A11Q8NBS3 891 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 EXD1Q8NHP7 514 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.91□□□□□ -1.46
NEK3-211ENST00000629912 NLRP7Q8WX94 980 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 SOCS4Q8WXH5 440 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 TFAP2BQ92481 460 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 SLCO2A1Q92959 643 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 CCDC102AQ96A19 550 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 EXOC4Q96A65 974 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 MAGOHBQ96A72 148 aaKnown RBP5.91□□□□□ -1.46
NEK3-211ENST00000629912 LRRC45Q96CN5 670 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 DDX27Q96GQ7 796 aaKnown RBP5.91□□□□□ -1.46
NEK3-211ENST00000629912 TMEM176AQ96HP8 235 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 HPDLQ96IR7 371 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 CPB2Q96IY4 423 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 BTBD6Q96KE9 485 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 HINFPQ9BQA5 517 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 FAM129AQ9BZQ8 928 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 RAB17Q9H0T7 212 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 DPP3Q9NY33 737 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 WDR35Q9P2L0 1181 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 CHORDC1Q9UHD1 332 aaPredicted RBP5.91□□□□□ -1.46
NEK3-211ENST00000629912 FEZ2Q9UHY8 353 aaPredicted RBP5.91□□□□□ -1.46
NEK3-211ENST00000629912 ADAM21Q9UKJ8 722 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 STRIP2Q9ULQ0 834 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 POLIQ9UNA4 740 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 CEP83Q9Y592 693 aa5.91□□□□□ -1.46
NEK3-211ENST00000629912 PDCD11Q14690 1871 aaKnown RBP5.9□□□□□ -1.46
NEK3-211ENST00000629912 RALGAPA2Q2PPJ7 1873 aa5.9□□□□□ -1.46
NEK3-211ENST00000629912 GOLGA6BA6NDN3 693 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms