RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 C18orf25Q96B23 403 aaPredicted RBP7.95□□□□□ -1.14
PKP4-217ENST00000628904 PCYT2Q99447 389 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 AP5M1Q9H0R1 490 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 GBA2Q9HCG7 927 aaPredicted RBP7.95□□□□□ -1.14
PKP4-217ENST00000628904 LRRC4CQ9HCJ2 640 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 MRPL47Q9HD33 250 aaKnown RBP7.95□□□□□ -1.14
PKP4-217ENST00000628904 PNMA3Q9UL41 463 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 FNDC3AQ9Y2H6 1198 aaKnown RBP7.95□□□□□ -1.14
PKP4-217ENST00000628904 KIAA0100Q14667 2235 aaKnown RBP7.95□□□□□ -1.14
PKP4-217ENST00000628904 DOCK2Q92608 1830 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 PDGFRAP16234 1089 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 FECHP22830 423 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 RFC1P35251 1148 aaPredicted RBP7.95□□□□□ -1.14
PKP4-217ENST00000628904 IRAK1P51617 712 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 ITGA8P53708 1063 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 TNFAIP2Q03169 654 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 COBLL1Q53SF7 1204 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 FAM133BQ5BKY9 247 aaKnown RBP7.95□□□□□ -1.14
PKP4-217ENST00000628904 CELF3Q5SZQ8 465 aaKnown RBP7.95□□□□□ -1.14
PKP4-217ENST00000628904 SH3PXD2AQ5TCZ1 1133 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 IER5Q5VY09 327 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 CXCL17Q6UXB2 119 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 PRELID2Q8N945 189 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 TCP11Q8WWU5 503 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 SHC3Q92529 594 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 UPF1Q92900 1129 aaKnown RBP eCLIP7.95□□□□□ -1.14
PKP4-217ENST00000628904 GPR20Q99678 358 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 ELAC2Q9BQ52 826 aaKnown RBP7.95□□□□□ -1.14
PKP4-217ENST00000628904 GPR88Q9GZN0 384 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 GINM1Q9NU53 330 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 RNF14Q9UBS8 474 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 RRP15Q9Y3B9 282 aaKnown RBP7.95□□□□□ -1.14
PKP4-217ENST00000628904 LAMB2P55268 1798 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 MYH4Q9Y623 1939 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 TARSL2A2RTX5 802 aaKnown RBP7.94□□□□□ -1.14
PKP4-217ENST00000628904 CCDC188H7C350 402 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 AGPSO00116 658 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 GH1P01241 217 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 PRKCIP41743 596 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 BCAR1P56945 870 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 MMRN1Q13201 1228 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 MXD4Q14582 209 aaPredicted RBP7.94□□□□□ -1.14
PKP4-217ENST00000628904 TMEM132DQ14C87 1099 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 IZUMO3Q5VZ72 239 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 TTC27Q6P3X3 843 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 MFSD7Q6UXD7 560 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 RUFY4Q6ZNE9 571 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 CTU1Q7Z7A3 348 aaKnown RBP7.94□□□□□ -1.14
PKP4-217ENST00000628904 PNMA8AQ86V59 439 aaPredicted RBP7.94□□□□□ -1.14
PKP4-217ENST00000628904 PALM2Q8IXS6 379 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 LRRC57Q8N9N7 239 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 TFAP2BQ92481 460 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 CFAP36Q96G28 342 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 BORCS6Q96GS4 357 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 AGAP3Q96P47 875 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 SENP7Q9BQF6 1050 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 NIF3L1Q9GZT8 377 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 DHX35Q9H5Z1 703 aaKnown RBP7.94□□□□□ -1.14
PKP4-217ENST00000628904 INTS9Q9NV88 658 aaKnown RBP7.94□□□□□ -1.14
PKP4-217ENST00000628904 GTPBP10A4D1E9 387 aaKnown RBP7.94□□□□□ -1.14
PKP4-217ENST00000628904 GOLGA8KD6RF30 607 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 ATP8B1O43520 1251 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 CLEC16AQ2KHT3 1053 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 ZACNQ401N2 412 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 CHADLQ6NUI6 762 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 CEP57Q86XR8 500 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 FAM71DQ8N9W8 422 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 WHAMMQ8TF30 809 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 AENQ8WTP8 325 aaKnown RBP7.94□□□□□ -1.14
PKP4-217ENST00000628904 HNRNPLLQ8WVV9 542 aaKnown RBP7.94□□□□□ -1.14
PKP4-217ENST00000628904 LPPQ93052 612 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 SIK2Q9H0K1 926 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 CDT1Q9H211 546 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 FAM114A2Q9NRY5 505 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 CAPN7Q9Y6W3 813 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 KAT6AQ92794 2004 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 HBP1O60381 514 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 VNN1O95497 513 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 ARF4P18085 180 aaPredicted RBP7.94□□□□□ -1.14
PKP4-217ENST00000628904 COILP38432 576 aaPredicted RBP7.94□□□□□ -1.14
PKP4-217ENST00000628904 NDST1P52848 882 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 NPNTQ6UXI9 565 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 LRRC31Q6UY01 552 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 FMNL3Q8IVF7 1028 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 RHOT1Q8IXI2 618 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 DNERQ8NFT8 737 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 JOSD2Q8TAC2 188 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 LMO3Q8TAP4 145 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 FBXO41Q8TF61 875 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 FAM167AQ96KS9 214 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 ZFP42Q96MM3 310 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 NXF3Q9H4D5 531 aaKnown RBP7.94□□□□□ -1.14
PKP4-217ENST00000628904 KIAA1586Q9HCI6 787 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 STK38LQ9Y2H1 464 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 KNL1Q8NG31 2342 aa7.94□□□□□ -1.14
PKP4-217ENST00000628904 NHSQ6T4R5 1651 aa7.93□□□□□ -1.14
PKP4-217ENST00000628904 CASTOR2A6NHX0 329 aa7.93□□□□□ -1.14
PKP4-217ENST00000628904 GOLGA8CPA6NN73 597 aa7.93□□□□□ -1.14
PKP4-217ENST00000628904 PPEF2O14830 753 aa7.93□□□□□ -1.14
PKP4-217ENST00000628904 PRPSAP2O60256 369 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms