RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 PPEF2O14830 753 aa15.84■□□□□ 0.13
PNKP-221ENST00000627317 SRGAP2BP0DMP2 458 aa15.84■□□□□ 0.13
PNKP-221ENST00000627317 IGFBP6P24592 240 aaPredicted RBP15.84■□□□□ 0.13
PNKP-221ENST00000627317 GTF2H1P32780 548 aa15.84■□□□□ 0.13
PNKP-221ENST00000627317 PNPLA4P41247 253 aa15.84■□□□□ 0.13
PNKP-221ENST00000627317 MTIF2P46199 727 aaKnown RBP15.84■□□□□ 0.13
PNKP-221ENST00000627317 GCLMP48507 274 aa15.84■□□□□ 0.13
PNKP-221ENST00000627317 GLUD2P49448 558 aa15.84■□□□□ 0.13
PNKP-221ENST00000627317 ZNF165P49910 485 aa15.84■□□□□ 0.13
PNKP-221ENST00000627317 MXI1P50539 228 aa15.84■□□□□ 0.13
PNKP-221ENST00000627317 CLCN4P51793 760 aa15.84■□□□□ 0.13
PNKP-221ENST00000627317 TRPC3Q13507 836 aa15.84■□□□□ 0.13
PNKP-221ENST00000627317 BMS1Q14692 1282 aaKnown RBP15.84■□□□□ 0.13
PNKP-221ENST00000627317 CBX2Q14781 532 aaPredicted RBP15.84■□□□□ 0.13
PNKP-221ENST00000627317 C1orf220Q5T0J3 134 aa15.84■□□□□ 0.13
PNKP-221ENST00000627317 TDRD10Q5VZ19 366 aaKnown RBP15.84■□□□□ 0.13
PNKP-221ENST00000627317 CD300LGQ6UXG3 332 aa15.84■□□□□ 0.13
PNKP-221ENST00000627317 FEZF2Q8TBJ5 459 aa15.84■□□□□ 0.13
PNKP-221ENST00000627317 ZNF516Q92618 1163 aa15.84■□□□□ 0.13
PNKP-221ENST00000627317 B3GALT6Q96L58 329 aa15.84■□□□□ 0.13
PNKP-221ENST00000627317 MRPL17Q9NRX2 175 aaKnown RBP15.84■□□□□ 0.13
PNKP-221ENST00000627317 SIX4Q9UIU6 781 aa15.84■□□□□ 0.13
PNKP-221ENST00000627317 CDH22Q9UJ99 828 aa15.84■□□□□ 0.13
PNKP-221ENST00000627317 LOC730098B7Z3J9 87 aa15.83■□□□□ 0.12
PNKP-221ENST00000627317 I3L4J1 428 aa15.83■□□□□ 0.12
PNKP-221ENST00000627317 PIRO00625 290 aa15.83■□□□□ 0.12
PNKP-221ENST00000627317 TEX28O15482 410 aa15.83■□□□□ 0.12
PNKP-221ENST00000627317 URODP06132 367 aa15.83■□□□□ 0.12
PNKP-221ENST00000627317 PAX3P23760 479 aa15.83■□□□□ 0.12
PNKP-221ENST00000627317 CA8P35219 290 aa15.83■□□□□ 0.12
PNKP-221ENST00000627317 PIK3CAP42336 1068 aa15.83■□□□□ 0.12
PNKP-221ENST00000627317 TAF6P49848 677 aa15.83■□□□□ 0.12
PNKP-221ENST00000627317 MARSP56192 900 aaKnown RBP15.83■□□□□ 0.12
PNKP-221ENST00000627317 PPP3CAQ08209 521 aa15.83■□□□□ 0.12
PNKP-221ENST00000627317 MYO1EQ12965 1108 aa15.83■□□□□ 0.12
PNKP-221ENST00000627317 SV2CQ496J9 727 aa15.83■□□□□ 0.12
PNKP-221ENST00000627317 HSP90AA4PQ58FG1 418 aa15.83■□□□□ 0.12
PNKP-221ENST00000627317 SV2AQ7L0J3 742 aa15.83■□□□□ 0.12
PNKP-221ENST00000627317 TRIM59Q8IWR1 403 aa15.83■□□□□ 0.12
PNKP-221ENST00000627317 LRRC52Q8N7C0 313 aa15.83■□□□□ 0.12
PNKP-221ENST00000627317 BPIFA3Q9BQP9 254 aa15.83■□□□□ 0.12
PNKP-221ENST00000627317 EPHX3Q9H6B9 360 aa15.83■□□□□ 0.12
PNKP-221ENST00000627317 TMEM8AQ9HCN3 771 aa15.83■□□□□ 0.12
PNKP-221ENST00000627317 C11orf16Q9NQ32 467 aa15.83■□□□□ 0.12
PNKP-221ENST00000627317 DZANK1Q9NVP4 752 aa15.83■□□□□ 0.12
PNKP-221ENST00000627317 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.83■□□□□ 0.12
PNKP-221ENST00000627317 BECN2A8MW95 431 aa15.82■□□□□ 0.12
PNKP-221ENST00000627317 PI4K2BG5E9Z4 385 aa15.82■□□□□ 0.12
PNKP-221ENST00000627317 N4BP1O75113 896 aaKnown RBP15.82■□□□□ 0.12
PNKP-221ENST00000627317 PAPLNO95428 1278 aa15.82■□□□□ 0.12
PNKP-221ENST00000627317 CAVIN2O95810 425 aa15.82■□□□□ 0.12
PNKP-221ENST00000627317 C4BPAP04003 597 aaKnown RBP15.82■□□□□ 0.12
PNKP-221ENST00000627317 BRCC3P46736 316 aa15.82■□□□□ 0.12
PNKP-221ENST00000627317 LILRA4P59901 499 aa15.82■□□□□ 0.12
PNKP-221ENST00000627317 NCOA4Q13772 614 aa15.82■□□□□ 0.12
PNKP-221ENST00000627317 ZACNQ401N2 412 aa15.82■□□□□ 0.12
PNKP-221ENST00000627317 RTP2Q5QGT7 225 aa15.82■□□□□ 0.12
PNKP-221ENST00000627317 FAM171A1Q5VUB5 890 aa15.82■□□□□ 0.12
PNKP-221ENST00000627317 KIAA1841Q6NSI8 718 aa15.82■□□□□ 0.12
PNKP-221ENST00000627317 DSTYKQ6XUX3 929 aa15.82■□□□□ 0.12
PNKP-221ENST00000627317 PPFIBP1Q86W92 1011 aa15.82■□□□□ 0.12
PNKP-221ENST00000627317 IRF2BP1Q8IU81 584 aa15.82■□□□□ 0.12
PNKP-221ENST00000627317 SLC35C1Q96A29 364 aa15.82■□□□□ 0.12
PNKP-221ENST00000627317 SUSD3Q96L08 255 aa15.82■□□□□ 0.12
PNKP-221ENST00000627317 PHF7Q9BWX1 381 aaPredicted RBP15.82■□□□□ 0.12
PNKP-221ENST00000627317 EMILIN2Q9BXX0 1053 aa15.82■□□□□ 0.12
PNKP-221ENST00000627317 ADAM7Q9H2U9 754 aa15.82■□□□□ 0.12
PNKP-221ENST00000627317 TSPY26PQ9H489 355 aa15.82■□□□□ 0.12
PNKP-221ENST00000627317 SAMSN1Q9NSI8 373 aaKnown RBP15.82■□□□□ 0.12
PNKP-221ENST00000627317 ARHGEF37A1IGU5 675 aa15.81■□□□□ 0.12
PNKP-221ENST00000627317 SMTNL1A8MU46 457 aa15.81■□□□□ 0.12
PNKP-221ENST00000627317 KCNJ18B7U540 433 aa15.81■□□□□ 0.12
PNKP-221ENST00000627317 C2CD2LO14523 706 aa15.81■□□□□ 0.12
PNKP-221ENST00000627317 HLA-DRAP01903 254 aa15.81■□□□□ 0.12
PNKP-221ENST00000627317 ODC1P11926 461 aa15.81■□□□□ 0.12
PNKP-221ENST00000627317 SSTR3P32745 418 aaPredicted RBP15.81■□□□□ 0.12
PNKP-221ENST00000627317 SCN1AP35498 2009 aa15.81■□□□□ 0.12
PNKP-221ENST00000627317 AARSP49588 968 aaKnown RBP eCLIP15.81■□□□□ 0.12
PNKP-221ENST00000627317 MYL7Q01449 175 aa15.81■□□□□ 0.12
PNKP-221ENST00000627317 ITIH3Q06033 890 aa15.81■□□□□ 0.12
PNKP-221ENST00000627317 KCNJ12Q14500 433 aa15.81■□□□□ 0.12
PNKP-221ENST00000627317 ZNF699Q32M78 642 aa15.81■□□□□ 0.12
PNKP-221ENST00000627317 USP41Q3LFD5 358 aa15.81■□□□□ 0.12
PNKP-221ENST00000627317 KRT39Q6A163 491 aa15.81■□□□□ 0.12
PNKP-221ENST00000627317 LRSAM1Q6UWE0 723 aa15.81■□□□□ 0.12
PNKP-221ENST00000627317 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.81■□□□□ 0.12
PNKP-221ENST00000627317 CEP57Q86XR8 500 aa15.81■□□□□ 0.12
PNKP-221ENST00000627317 CXorf38Q8TB03 319 aa15.81■□□□□ 0.12
PNKP-221ENST00000627317 HPDLQ96IR7 371 aa15.81■□□□□ 0.12
PNKP-221ENST00000627317 TTPALQ9BTX7 342 aa15.81■□□□□ 0.12
PNKP-221ENST00000627317 APOL5Q9BWW9 433 aa15.81■□□□□ 0.12
PNKP-221ENST00000627317 IMPG2Q9BZV3 1241 aa15.81■□□□□ 0.12
PNKP-221ENST00000627317 FANCLQ9NW38 375 aa15.81■□□□□ 0.12
PNKP-221ENST00000627317 SSX2IPQ9Y2D8 614 aa15.81■□□□□ 0.12
PNKP-221ENST00000627317 KPNA7A9QM74 516 aa15.8■□□□□ 0.12
PNKP-221ENST00000627317 SYN3O14994 580 aa15.8■□□□□ 0.12
PNKP-221ENST00000627317 SPTLC1O15269 473 aa15.8■□□□□ 0.12
PNKP-221ENST00000627317 C1RP00736 705 aa15.8■□□□□ 0.12
PNKP-221ENST00000627317 AFPP02771 609 aaKnown RBP15.8■□□□□ 0.12
PNKP-221ENST00000627317 EEF1GP26641 437 aaKnown RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms