RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 ARL2BPQ9Y2Y0 163 aa11.93□□□□□ -0.5
VARS2-213ENST00000625423 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.93□□□□□ -0.5
VARS2-213ENST00000625423 CFAP73A6NFT4 308 aa11.92□□□□□ -0.5
VARS2-213ENST00000625423 EDN1P05305 212 aa11.92□□□□□ -0.5
VARS2-213ENST00000625423 ETS1P14921 441 aa11.92□□□□□ -0.5
VARS2-213ENST00000625423 SP2Q02086 613 aa11.92□□□□□ -0.5
VARS2-213ENST00000625423 MFSD7Q6UXD7 560 aa11.92□□□□□ -0.5
VARS2-213ENST00000625423 RELL1Q8IUW5 271 aa11.92□□□□□ -0.5
VARS2-213ENST00000625423 ZCCHC9Q8N567 271 aaKnown RBP11.92□□□□□ -0.5
VARS2-213ENST00000625423 FITM2Q8N6M3 262 aa11.92□□□□□ -0.5
VARS2-213ENST00000625423 DEPTORQ8TB45 409 aa11.92□□□□□ -0.5
VARS2-213ENST00000625423 MAGEB18Q96M61 343 aa11.92□□□□□ -0.5
VARS2-213ENST00000625423 PAIP2Q9BPZ3 127 aaKnown RBP11.92□□□□□ -0.5
VARS2-213ENST00000625423 EURLQ9NYK6 297 aa11.92□□□□□ -0.5
VARS2-213ENST00000625423 PNMA3Q9UL41 463 aa11.92□□□□□ -0.5
VARS2-213ENST00000625423 NFASCO94856 1347 aa11.92□□□□□ -0.5
VARS2-213ENST00000625423 SUPT20HL2P0C7V6 817 aa11.92□□□□□ -0.5
VARS2-213ENST00000625423 KCNA3P22001 575 aa11.92□□□□□ -0.5
VARS2-213ENST00000625423 SLC8A1P32418 973 aa11.92□□□□□ -0.5
VARS2-213ENST00000625423 BACE1P56817 501 aa11.92□□□□□ -0.5
VARS2-213ENST00000625423 SUPT20HL1Q3ZLR7 823 aa11.92□□□□□ -0.5
VARS2-213ENST00000625423 CIAPIN1Q6FI81 312 aa11.92□□□□□ -0.5
VARS2-213ENST00000625423 REPS2Q8NFH8 660 aa11.92□□□□□ -0.5
VARS2-213ENST00000625423 ZNF606Q8WXB4 792 aa11.92□□□□□ -0.5
VARS2-213ENST00000625423 ACSF2Q96CM8 615 aaPredicted RBP11.92□□□□□ -0.5
VARS2-213ENST00000625423 RMDN2Q96LZ7 410 aa11.92□□□□□ -0.5
VARS2-213ENST00000625423 MYCBPQ99417 103 aaPredicted RBP11.92□□□□□ -0.5
VARS2-213ENST00000625423 CGRRF1Q99675 332 aa11.92□□□□□ -0.5
VARS2-213ENST00000625423 PRKAG3Q9UGI9 489 aa11.92□□□□□ -0.5
VARS2-213ENST00000625423 IP6K2Q9UHH9 426 aa11.92□□□□□ -0.5
VARS2-213ENST00000625423 GJA3Q9Y6H8 435 aa11.92□□□□□ -0.5
VARS2-213ENST00000625423 IVNS1ABPQ9Y6Y0 642 aa11.92□□□□□ -0.5
VARS2-213ENST00000625423 EXOC1LA0A1B0GW35 172 aa11.92□□□□□ -0.5
VARS2-213ENST00000625423 SPAG7O75391 227 aa11.92□□□□□ -0.5
VARS2-213ENST00000625423 KRT1P04264 644 aa11.92□□□□□ -0.5
VARS2-213ENST00000625423 NQO1P15559 274 aaKnown RBP11.92□□□□□ -0.5
VARS2-213ENST00000625423 FOXN2P32314 431 aa11.92□□□□□ -0.5
VARS2-213ENST00000625423 CETN2P41208 172 aa11.92□□□□□ -0.5
VARS2-213ENST00000625423 BNIP1Q12981 228 aa11.92□□□□□ -0.5
VARS2-213ENST00000625423 NCOA4Q13772 614 aa11.92□□□□□ -0.5
VARS2-213ENST00000625423 TNFAIP1Q13829 316 aa11.92□□□□□ -0.5
VARS2-213ENST00000625423 CAPN12Q6ZSI9 719 aa11.92□□□□□ -0.5
VARS2-213ENST00000625423 MAML1Q92585 1016 aa11.92□□□□□ -0.5
VARS2-213ENST00000625423 HAUS1Q96CS2 278 aa11.92□□□□□ -0.5
VARS2-213ENST00000625423 SLITRK1Q96PX8 696 aa11.92□□□□□ -0.5
VARS2-213ENST00000625423 MCM8Q9UJA3 840 aa11.92□□□□□ -0.5
VARS2-213ENST00000625423 ZNF214Q9UL59 606 aaPredicted RBP11.92□□□□□ -0.5
VARS2-213ENST00000625423 CNTNAP2Q9UHC6 1331 aa11.91□□□□□ -0.5
VARS2-213ENST00000625423 F8VP50 259 aa11.91□□□□□ -0.5
VARS2-213ENST00000625423 IGF2BP3O00425 579 aaKnown RBP eCLIP11.91□□□□□ -0.5
VARS2-213ENST00000625423 DNALI1O14645 258 aaPredicted RBP11.91□□□□□ -0.5
VARS2-213ENST00000625423 TAC1P20366 129 aa11.91□□□□□ -0.5
VARS2-213ENST00000625423 TBXAS1P24557 533 aaPredicted RBP11.91□□□□□ -0.5
VARS2-213ENST00000625423 ABCD1P33897 745 aa11.91□□□□□ -0.5
VARS2-213ENST00000625423 ARSEP51690 589 aa11.91□□□□□ -0.5
VARS2-213ENST00000625423 COPS2P61201 443 aa11.91□□□□□ -0.5
VARS2-213ENST00000625423 NEDD9Q14511 834 aa11.91□□□□□ -0.5
VARS2-213ENST00000625423 FASTKD3Q14CZ7 662 aaKnown RBP11.91□□□□□ -0.5
VARS2-213ENST00000625423 TMEM132BQ14DG7 1078 aa11.91□□□□□ -0.5
VARS2-213ENST00000625423 NBPF12Q5TAG4 269 aaPredicted RBP11.91□□□□□ -0.5
VARS2-213ENST00000625423 SLFN12LQ6IEE8 588 aa11.91□□□□□ -0.5
VARS2-213ENST00000625423 FAM47EQ6ZV65 393 aa11.91□□□□□ -0.5
VARS2-213ENST00000625423 RCOR2Q8IZ40 523 aa11.91□□□□□ -0.5
VARS2-213ENST00000625423 ANKRD35Q8N283 1001 aa11.91□□□□□ -0.5
VARS2-213ENST00000625423 KIF2BQ8N4N8 673 aa11.91□□□□□ -0.5
VARS2-213ENST00000625423 JDP2Q8WYK2 163 aa11.91□□□□□ -0.5
VARS2-213ENST00000625423 CDHR1Q96JP9 859 aa11.91□□□□□ -0.5
VARS2-213ENST00000625423 MCEEQ96PE7 176 aa11.91□□□□□ -0.5
VARS2-213ENST00000625423 PORCNQ9H237 461 aa11.91□□□□□ -0.5
VARS2-213ENST00000625423 CYP39A1Q9NYL5 469 aa11.91□□□□□ -0.5
VARS2-213ENST00000625423 FZD1Q9UP38 647 aa11.91□□□□□ -0.5
VARS2-213ENST00000625423 CNTN6Q9UQ52 1028 aa11.91□□□□□ -0.5
VARS2-213ENST00000625423 TMEM191CA6NGB0 347 aa11.91□□□□□ -0.5
VARS2-213ENST00000625423 SPATA31C2B4DYI2 1134 aa11.91□□□□□ -0.5
VARS2-213ENST00000625423 POC1B-GALNT4F8VUJ3 575 aa11.91□□□□□ -0.5
VARS2-213ENST00000625423 CST3P01034 146 aaPredicted RBP11.91□□□□□ -0.5
VARS2-213ENST00000625423 TMEM191BP0C7N4 346 aa11.91□□□□□ -0.5
VARS2-213ENST00000625423 EZRP15311 586 aaKnown RBP11.91□□□□□ -0.5
VARS2-213ENST00000625423 MMP8P22894 467 aa11.91□□□□□ -0.5
VARS2-213ENST00000625423 GCAP28676 217 aa11.91□□□□□ -0.5
VARS2-213ENST00000625423 WDR4P57081 412 aaKnown RBP11.91□□□□□ -0.5
VARS2-213ENST00000625423 IRX3P78415 501 aaPredicted RBP11.91□□□□□ -0.5
VARS2-213ENST00000625423 LMNB2Q03252 620 aa11.91□□□□□ -0.5
VARS2-213ENST00000625423 MGAT5Q09328 741 aa11.91□□□□□ -0.5
VARS2-213ENST00000625423 ZNF252P-AS1Q0IIN9 211 aa11.91□□□□□ -0.5
VARS2-213ENST00000625423 MKRN3Q13064 507 aaKnown RBP11.91□□□□□ -0.5
VARS2-213ENST00000625423 GPS1Q13098 491 aa11.91□□□□□ -0.5
VARS2-213ENST00000625423 ZNF394Q53GI3 561 aa11.91□□□□□ -0.5
VARS2-213ENST00000625423 TXNRD3NBQ6F5E7 133 aa11.91□□□□□ -0.5
VARS2-213ENST00000625423 PPP1R21Q6ZMI0 780 aa11.91□□□□□ -0.5
VARS2-213ENST00000625423 RBM41Q96IZ5 413 aaKnown RBP11.91□□□□□ -0.5
VARS2-213ENST00000625423 CFAP57Q96MR6 1250 aa11.91□□□□□ -0.5
VARS2-213ENST00000625423 ACTL7BQ9Y614 415 aa11.91□□□□□ -0.5
VARS2-213ENST00000625423 A0A0B4J269 797 aa11.9□□□□□ -0.5
VARS2-213ENST00000625423 FAM47DPA6NHR8 397 aa11.9□□□□□ -0.5
VARS2-213ENST00000625423 LDHAP00338 332 aaKnown RBP11.9□□□□□ -0.5
VARS2-213ENST00000625423 ABHD2P08910 425 aa11.9□□□□□ -0.5
VARS2-213ENST00000625423 PECAM1P16284 738 aaPredicted RBP11.9□□□□□ -0.5
VARS2-213ENST00000625423 NAMPTP43490 491 aa11.9□□□□□ -0.5
VARS2-213ENST00000625423 HMGCS2P54868 508 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms