RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 NOGQ13253 232 aa17.39■□□□□ 0.37
LDB3-208ENST00000623007 CASP8Q14790 479 aa17.39■□□□□ 0.37
LDB3-208ENST00000623007 KIZQ2M2Z5 673 aa17.39■□□□□ 0.37
LDB3-208ENST00000623007 HSP90B2PQ58FF3 399 aa17.39■□□□□ 0.37
LDB3-208ENST00000623007 PRAMEF19Q5SWL8 479 aa17.39■□□□□ 0.37
LDB3-208ENST00000623007 LRRC52Q8N7C0 313 aa17.39■□□□□ 0.37
LDB3-208ENST00000623007 CAVIN3Q969G5 261 aa17.39■□□□□ 0.37
LDB3-208ENST00000623007 ZNF668Q96K58 619 aaPredicted RBP17.39■□□□□ 0.37
LDB3-208ENST00000623007 FAM49AQ9H0Q0 323 aaPredicted RBP17.39■□□□□ 0.37
LDB3-208ENST00000623007 UPF3AQ9H1J1 476 aaKnown RBP17.39■□□□□ 0.37
LDB3-208ENST00000623007 GOLPH3Q9H4A6 298 aa17.39■□□□□ 0.37
LDB3-208ENST00000623007 HOMER3Q9NSC5 361 aa17.39■□□□□ 0.37
LDB3-208ENST00000623007 DPP3Q9NY33 737 aa17.39■□□□□ 0.37
LDB3-208ENST00000623007 RASAL2Q9UJF2 1139 aa17.39■□□□□ 0.37
LDB3-208ENST00000623007 FAM187AA6NFU0 413 aa17.39■□□□□ 0.37
LDB3-208ENST00000623007 RRM1P23921 792 aa17.39■□□□□ 0.37
LDB3-208ENST00000623007 CHRNA3P32297 505 aa17.39■□□□□ 0.37
LDB3-208ENST00000623007 PEX5P50542 639 aa17.39■□□□□ 0.37
LDB3-208ENST00000623007 SNX16P57768 344 aa17.39■□□□□ 0.37
LDB3-208ENST00000623007 HACE1Q8IYU2 909 aa17.39■□□□□ 0.37
LDB3-208ENST00000623007 GOLGA6L1Q8N7Z2 621 aa17.39■□□□□ 0.37
LDB3-208ENST00000623007 AENQ8WTP8 325 aaKnown RBP17.39■□□□□ 0.37
LDB3-208ENST00000623007 CPA5Q8WXQ8 436 aa17.39■□□□□ 0.37
LDB3-208ENST00000623007 HPDLQ96IR7 371 aa17.39■□□□□ 0.37
LDB3-208ENST00000623007 FAM129AQ9BZQ8 928 aa17.39■□□□□ 0.37
LDB3-208ENST00000623007 RNF216Q9NWF9 866 aaPredicted RBP17.39■□□□□ 0.37
LDB3-208ENST00000623007 SIX4Q9UIU6 781 aa17.39■□□□□ 0.37
LDB3-208ENST00000623007 UTP11Q9Y3A2 253 aaKnown RBP17.39■□□□□ 0.37
LDB3-208ENST00000623007 UMODL1Q5DID0 1318 aa17.38■□□□□ 0.37
LDB3-208ENST00000623007 CASP8AP2Q9UKL3 1982 aa17.38■□□□□ 0.37
LDB3-208ENST00000623007 CITO14578 2027 aa17.38■□□□□ 0.37
LDB3-208ENST00000623007 SART1O43290 800 aaKnown RBP17.38■□□□□ 0.37
LDB3-208ENST00000623007 PROSCO94903 275 aa17.38■□□□□ 0.37
LDB3-208ENST00000623007 VDRP11473 427 aa17.38■□□□□ 0.37
LDB3-208ENST00000623007 PNPLA4P41247 253 aa17.38■□□□□ 0.37
LDB3-208ENST00000623007 INCA1Q0VD86 236 aa17.38■□□□□ 0.37
LDB3-208ENST00000623007 CCL14Q16627 93 aa17.38■□□□□ 0.37
LDB3-208ENST00000623007 FEZF2Q8TBJ5 459 aa17.38■□□□□ 0.37
LDB3-208ENST00000623007 ZBTB10Q96DT7 871 aa17.38■□□□□ 0.37
LDB3-208ENST00000623007 KIF12Q96FN5 646 aa17.38■□□□□ 0.37
LDB3-208ENST00000623007 FAM114A2Q9NRY5 505 aa17.38■□□□□ 0.37
LDB3-208ENST00000623007 NXF1Q9UBU9 619 aaKnown RBP17.38■□□□□ 0.37
LDB3-208ENST00000623007 FEZ2Q9UHY8 353 aaPredicted RBP17.38■□□□□ 0.37
LDB3-208ENST00000623007 UBQLN1Q9UMX0 589 aaKnown RBP17.38■□□□□ 0.37
LDB3-208ENST00000623007 TLR3O15455 904 aaKnown RBP17.37■□□□□ 0.37
LDB3-208ENST00000623007 HMGCRP04035 888 aa17.37■□□□□ 0.37
LDB3-208ENST00000623007 CYBAP13498 195 aa17.37■□□□□ 0.37
LDB3-208ENST00000623007 CD58P19256 250 aa17.37■□□□□ 0.37
LDB3-208ENST00000623007 HOXA11P31270 313 aaPredicted RBP17.37■□□□□ 0.37
LDB3-208ENST00000623007 MAMLD1Q13495 774 aa17.37■□□□□ 0.37
LDB3-208ENST00000623007 SNX17Q15036 470 aa17.37■□□□□ 0.37
LDB3-208ENST00000623007 RPAINQ86UA6 219 aa17.37■□□□□ 0.37
LDB3-208ENST00000623007 ERICH1Q86X53 443 aa17.37■□□□□ 0.37
LDB3-208ENST00000623007 RHOT1Q8IXI2 618 aa17.37■□□□□ 0.37
LDB3-208ENST00000623007 TMEM176AQ96HP8 235 aa17.37■□□□□ 0.37
LDB3-208ENST00000623007 SNX27Q96L92 541 aa17.37■□□□□ 0.37
LDB3-208ENST00000623007 CNTN3Q9P232 1028 aa17.37■□□□□ 0.37
LDB3-208ENST00000623007 DMGDHQ9UI17 866 aaKnown RBP17.37■□□□□ 0.37
LDB3-208ENST00000623007 BARX2Q9UMQ3 279 aaPredicted RBP17.37■□□□□ 0.37
LDB3-208ENST00000623007 PODXLO00592 558 aa17.36■□□□□ 0.37
LDB3-208ENST00000623007 SEPT4O43236 478 aa17.36■□□□□ 0.37
LDB3-208ENST00000623007 CILPO75339 1184 aa17.36■□□□□ 0.37
LDB3-208ENST00000623007 NPTXRO95502 500 aa17.36■□□□□ 0.37
LDB3-208ENST00000623007 RARBP10826 455 aa17.36■□□□□ 0.37
LDB3-208ENST00000623007 CYP3A5P20815 502 aa17.36■□□□□ 0.37
LDB3-208ENST00000623007 PSMC4P43686 418 aa17.36■□□□□ 0.37
LDB3-208ENST00000623007 TNNT3P45378 269 aaPredicted RBP17.36■□□□□ 0.37
LDB3-208ENST00000623007 PIGHQ14442 188 aaPredicted RBP17.36■□□□□ 0.37
LDB3-208ENST00000623007 SMC1AQ14683 1233 aaKnown RBP17.36■□□□□ 0.37
LDB3-208ENST00000623007 LRRC38Q5VT99 294 aa17.36■□□□□ 0.37
LDB3-208ENST00000623007 CDR2LQ86X02 465 aaPredicted RBP17.36■□□□□ 0.37
LDB3-208ENST00000623007 CXorf38Q8TB03 319 aa17.36■□□□□ 0.37
LDB3-208ENST00000623007 DNAJB3Q8WWF6 145 aa17.36■□□□□ 0.37
LDB3-208ENST00000623007 ZNF560Q96MR9 790 aa17.36■□□□□ 0.37
LDB3-208ENST00000623007 OSMRQ99650 979 aa17.36■□□□□ 0.37
LDB3-208ENST00000623007 C11orf70Q9BRQ4 267 aa17.36■□□□□ 0.37
LDB3-208ENST00000623007 EHD2Q9NZN4 543 aa17.36■□□□□ 0.37
LDB3-208ENST00000623007 AGAP1Q9UPQ3 857 aa17.36■□□□□ 0.37
LDB3-208ENST00000623007 DOCK3Q8IZD9 2030 aa17.36■□□□□ 0.37
LDB3-208ENST00000623007 TMEM110-MUSTN1A8MSY1 372 aa17.36■□□□□ 0.37
LDB3-208ENST00000623007 PHF2O75151 1096 aa17.36■□□□□ 0.37
LDB3-208ENST00000623007 WEE2P0C1S8 567 aa17.36■□□□□ 0.37
LDB3-208ENST00000623007 FAM163BP0C2L3 166 aa17.36■□□□□ 0.37
LDB3-208ENST00000623007 HOXD10P28358 340 aa17.36■□□□□ 0.37
LDB3-208ENST00000623007 C1QTNF8P60827 252 aa17.36■□□□□ 0.37
LDB3-208ENST00000623007 GUCY2DQ02846 1103 aa17.36■□□□□ 0.37
LDB3-208ENST00000623007 PTPN11Q06124 597 aaPredicted RBP17.36■□□□□ 0.37
LDB3-208ENST00000623007 GABPB1Q06547 395 aaPredicted RBP17.36■□□□□ 0.37
LDB3-208ENST00000623007 ALS2CLQ60I27 953 aa17.36■□□□□ 0.37
LDB3-208ENST00000623007 DNAJC24Q6P3W2 148 aa17.36■□□□□ 0.37
LDB3-208ENST00000623007 SESTD1Q86VW0 696 aa17.36■□□□□ 0.37
LDB3-208ENST00000623007 KLHL7Q8IXQ5 586 aa17.36■□□□□ 0.37
LDB3-208ENST00000623007 TMEM192Q8IY95 271 aa17.36■□□□□ 0.37
LDB3-208ENST00000623007 C3orf20Q8ND61 904 aa17.36■□□□□ 0.37
LDB3-208ENST00000623007 FNIP1Q8TF40 1166 aa17.36■□□□□ 0.37
LDB3-208ENST00000623007 ALG3Q92685 438 aa17.36■□□□□ 0.37
LDB3-208ENST00000623007 PPP1R16BQ96T49 567 aa17.36■□□□□ 0.37
LDB3-208ENST00000623007 UBXN6Q9BZV1 441 aa17.36■□□□□ 0.37
LDB3-208ENST00000623007 EPB41L5Q9HCM4 733 aa17.36■□□□□ 0.37
LDB3-208ENST00000623007 CHST12Q9NRB3 414 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms