RNA–Protein interactions for RNA: ENST00000622776.1

CPSF1-214, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-214ENST00000622776 HNRNPDLO14979 420 aaKnown RBP25.83■■□□□ 1.73
CPSF1-214ENST00000622776 OGTO15294 1046 aa25.83■■□□□ 1.73
CPSF1-214ENST00000622776 FAM189A1O60320 539 aa25.83■■□□□ 1.73
CPSF1-214ENST00000622776 PIGRP01833 764 aa25.83■■□□□ 1.73
CPSF1-214ENST00000622776 ADRB2P07550 413 aa25.83■■□□□ 1.73
CPSF1-214ENST00000622776 TDGF1P13385 188 aa25.83■■□□□ 1.73
CPSF1-214ENST00000622776 TYMPP19971 482 aa25.83■■□□□ 1.73
CPSF1-214ENST00000622776 ALDH1A3P47895 512 aa25.83■■□□□ 1.73
CPSF1-214ENST00000622776 OVOS1Q6IE37 1185 aa25.83■■□□□ 1.73
CPSF1-214ENST00000622776 CENPPQ6IPU0 288 aa25.83■■□□□ 1.73
CPSF1-214ENST00000622776 RSPRY1Q96DX4 576 aa25.83■■□□□ 1.73
CPSF1-214ENST00000622776 TSPAN18Q96SJ8 248 aa25.83■■□□□ 1.73
CPSF1-214ENST00000622776 REEP2Q9BRK0 252 aa25.83■■□□□ 1.73
CPSF1-214ENST00000622776 PPEF2O14830 753 aa25.82■■□□□ 1.72
CPSF1-214ENST00000622776 SLC26A4O43511 780 aa25.82■■□□□ 1.72
CPSF1-214ENST00000622776 CCNE1P24864 410 aa25.82■■□□□ 1.72
CPSF1-214ENST00000622776 NRLP54845 237 aa25.82■■□□□ 1.72
CPSF1-214ENST00000622776 MYBPC2Q14324 1141 aa25.82■■□□□ 1.72
CPSF1-214ENST00000622776 PPP2R5DQ14738 602 aa25.82■■□□□ 1.72
CPSF1-214ENST00000622776 SPATA1Q5VX52 437 aa25.82■■□□□ 1.72
CPSF1-214ENST00000622776 GPBP1Q86WP2 473 aa25.82■■□□□ 1.72
CPSF1-214ENST00000622776 YAF2Q8IY57 180 aa25.82■■□□□ 1.72
CPSF1-214ENST00000622776 ATAD1Q8NBU5 361 aa25.82■■□□□ 1.72
CPSF1-214ENST00000622776 AK8Q96MA6 479 aa25.82■■□□□ 1.72
CPSF1-214ENST00000622776 SLC27A5Q9Y2P5 690 aa25.82■■□□□ 1.72
CPSF1-214ENST00000622776 MTMR11A4FU01 709 aa25.81■■□□□ 1.72
CPSF1-214ENST00000622776 H3BQV1 296 aa25.81■■□□□ 1.72
CPSF1-214ENST00000622776 K7ENM7 598 aa25.81■■□□□ 1.72
CPSF1-214ENST00000622776 CHRNB1P11230 501 aa25.81■■□□□ 1.72
CPSF1-214ENST00000622776 SCP2P22307 547 aa25.81■■□□□ 1.72
CPSF1-214ENST00000622776 CCR3P51677 355 aa25.81■■□□□ 1.72
CPSF1-214ENST00000622776 MLLT6P55198 1093 aaPredicted RBP25.81■■□□□ 1.72
CPSF1-214ENST00000622776 LILRA4P59901 499 aa25.81■■□□□ 1.72
CPSF1-214ENST00000622776 DHX8Q14562 1220 aaKnown RBP25.81■■□□□ 1.72
CPSF1-214ENST00000622776 RABEP1Q15276 862 aa25.81■■□□□ 1.72
CPSF1-214ENST00000622776 MYCT1Q8N699 235 aa25.81■■□□□ 1.72
CPSF1-214ENST00000622776 FAM212AQ96EL1 285 aa25.81■■□□□ 1.72
CPSF1-214ENST00000622776 SENP8Q96LD8 212 aa25.81■■□□□ 1.72
CPSF1-214ENST00000622776 ASB3Q9Y575 518 aa25.81■■□□□ 1.72
CPSF1-214ENST00000622776 EPG5Q9HCE0 2579 aa25.8■■□□□ 1.72
CPSF1-214ENST00000622776 A0A0B4J269 797 aa25.8■■□□□ 1.72
CPSF1-214ENST00000622776 CHADO15335 359 aa25.8■■□□□ 1.72
CPSF1-214ENST00000622776 FAM13AO94988 1023 aa25.8■■□□□ 1.72
CPSF1-214ENST00000622776 ZNF131P52739 623 aa25.8■■□□□ 1.72
CPSF1-214ENST00000622776 C8orf34Q49A92 452 aa25.8■■□□□ 1.72
CPSF1-214ENST00000622776 STXBP5Q5T5C0 1151 aa25.8■■□□□ 1.72
CPSF1-214ENST00000622776 JADE1Q6IE81 842 aa25.8■■□□□ 1.72
CPSF1-214ENST00000622776 DNAJB7Q7Z6W7 309 aaPredicted RBP25.8■■□□□ 1.72
CPSF1-214ENST00000622776 ARID3BQ8IVW6 561 aaPredicted RBP25.8■■□□□ 1.72
CPSF1-214ENST00000622776 CD302Q8IX05 232 aa25.8■■□□□ 1.72
CPSF1-214ENST00000622776 CSGALNACT1Q8TDX6 532 aa25.8■■□□□ 1.72
CPSF1-214ENST00000622776 LRRC15Q8TF66 581 aa25.8■■□□□ 1.72
CPSF1-214ENST00000622776 CALML4Q96GE6 196 aa25.8■■□□□ 1.72
CPSF1-214ENST00000622776 TMEM209Q96SK2 561 aa25.8■■□□□ 1.72
CPSF1-214ENST00000622776 MSTO1Q9BUK6 570 aa25.8■■□□□ 1.72
CPSF1-214ENST00000622776 PARVGQ9HBI0 331 aa25.8■■□□□ 1.72
CPSF1-214ENST00000622776 ACACBO00763 2458 aa25.79■■□□□ 1.72
CPSF1-214ENST00000622776 ODC1P11926 461 aa25.79■■□□□ 1.72
CPSF1-214ENST00000622776 SDHBP21912 280 aa25.79■■□□□ 1.72
CPSF1-214ENST00000622776 GJB2P29033 226 aa25.79■■□□□ 1.72
CPSF1-214ENST00000622776 UBA7P41226 1012 aa25.79■■□□□ 1.72
CPSF1-214ENST00000622776 FCHO2Q0JRZ9 810 aa25.79■■□□□ 1.72
CPSF1-214ENST00000622776 ARMCX5Q6P1M9 558 aa25.79■■□□□ 1.72
CPSF1-214ENST00000622776 GAREM2Q75VX8 874 aa25.79■■□□□ 1.72
CPSF1-214ENST00000622776 GPIHBP1Q8IV16 184 aa25.79■■□□□ 1.72
CPSF1-214ENST00000622776 TTC9BQ8N6N2 239 aa25.79■■□□□ 1.72
CPSF1-214ENST00000622776 PSMG2Q969U7 264 aa25.79■■□□□ 1.72
CPSF1-214ENST00000622776 MSANTD3Q96H12 275 aa25.79■■□□□ 1.72
CPSF1-214ENST00000622776 TMX3Q96JJ7 454 aa25.79■■□□□ 1.72
CPSF1-214ENST00000622776 C8orf33Q9H7E9 229 aaPredicted RBP25.79■■□□□ 1.72
CPSF1-214ENST00000622776 BLOC1S4Q9NUP1 217 aa25.79■■□□□ 1.72
CPSF1-214ENST00000622776 GMEB2Q9UKD1 530 aa25.79■■□□□ 1.72
CPSF1-214ENST00000622776 CPSF3Q9UKF6 684 aaKnown RBP25.79■■□□□ 1.72
CPSF1-214ENST00000622776 CACNA1BQ00975 2339 aa25.79■■□□□ 1.72
CPSF1-214ENST00000622776 TRAK2O60296 914 aa25.78■■□□□ 1.72
CPSF1-214ENST00000622776 SOAT2O75908 522 aa25.78■■□□□ 1.72
CPSF1-214ENST00000622776 TGM1P22735 817 aa25.78■■□□□ 1.72
CPSF1-214ENST00000622776 PAX3P23760 479 aa25.78■■□□□ 1.72
CPSF1-214ENST00000622776 CXCL12P48061 93 aa25.78■■□□□ 1.72
CPSF1-214ENST00000622776 GAS6Q14393 721 aa25.78■■□□□ 1.72
CPSF1-214ENST00000622776 C9orf57Q5W0N0 161 aa25.78■■□□□ 1.72
CPSF1-214ENST00000622776 SLC39A4Q6P5W5 647 aa25.78■■□□□ 1.72
CPSF1-214ENST00000622776 C1orf228Q6PIY5 440 aa25.78■■□□□ 1.72
CPSF1-214ENST00000622776 MKNK1Q9BUB5 465 aa25.78■■□□□ 1.72
CPSF1-214ENST00000622776 ATXN3LQ9H3M9 355 aa25.78■■□□□ 1.72
CPSF1-214ENST00000622776 RAB23Q9ULC3 237 aa25.78■■□□□ 1.72
CPSF1-214ENST00000622776 USP18Q9UMW8 372 aa25.78■■□□□ 1.72
CPSF1-214ENST00000622776 PRR5-ARHGAP8B1AHC4 643 aa25.77■■□□□ 1.72
CPSF1-214ENST00000622776 NFICP08651 508 aa25.77■■□□□ 1.72
CPSF1-214ENST00000622776 KPNA1P52294 538 aaPredicted RBP25.77■■□□□ 1.72
CPSF1-214ENST00000622776 ARHGAP8P85298 464 aa25.77■■□□□ 1.72
CPSF1-214ENST00000622776 SATB1Q01826 763 aa25.77■■□□□ 1.72
CPSF1-214ENST00000622776 LMNB2Q03252 620 aa25.77■■□□□ 1.72
CPSF1-214ENST00000622776 MCM6Q14566 821 aa25.77■■□□□ 1.72
CPSF1-214ENST00000622776 CELF5Q8N6W0 485 aaKnown RBP25.77■■□□□ 1.72
CPSF1-214ENST00000622776 LRRC3BQ96PB8 259 aa25.77■■□□□ 1.72
CPSF1-214ENST00000622776 HSFX1Q9UBD0 423 aa25.77■■□□□ 1.72
CPSF1-214ENST00000622776 SDK1Q7Z5N4 2213 aa25.76■■□□□ 1.71
CPSF1-214ENST00000622776 SLC38A8A6NNN8 435 aa25.76■■□□□ 1.71
CPSF1-214ENST00000622776 PIRO00625 290 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms