RNA–Protein interactions for RNA: ENST00000622755.4

CBWD3-218, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,413 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-218ENST00000622755 RPN1P04843 607 aaKnown RBP13.3□□□□□ -0.28
CBWD3-218ENST00000622755 PTPN2P17706 415 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 CASP1P29466 404 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 POLR2BP30876 1174 aaKnown RBP13.3□□□□□ -0.28
CBWD3-218ENST00000622755 ALDH1A3P47895 512 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 TSPY1Q01534 308 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 SMARCB1Q12824 385 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 SNRNP35Q16560 246 aaKnown RBP13.3□□□□□ -0.28
CBWD3-218ENST00000622755 BMT2Q1RMZ1 405 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 KMT5BQ4FZB7 885 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 PABPC1LQ4VXU2 614 aaKnown RBP13.3□□□□□ -0.28
CBWD3-218ENST00000622755 CYP4A22Q5TCH4 519 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 KRBA2Q6ZNG9 492 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 WDR49Q8IV35 697 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 TCEAL8Q8IYN2 117 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 GRAMD1CQ8IYS0 662 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 DCP1BQ8IZD4 617 aaKnown RBP13.3□□□□□ -0.28
CBWD3-218ENST00000622755 RDH13Q8NBN7 331 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 LEMD2Q8NC56 503 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 SCFD1Q8WVM8 642 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 KHSRPQ92945 711 aaKnown RBP eCLIP13.3□□□□□ -0.28
CBWD3-218ENST00000622755 ZNF707Q96C28 371 aaPredicted RBP13.3□□□□□ -0.28
CBWD3-218ENST00000622755 LRFN3Q9BTN0 628 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 FGFBP2Q9BYJ0 223 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 GTPBP4Q9BZE4 634 aaKnown RBP13.3□□□□□ -0.28
CBWD3-218ENST00000622755 IKZF4Q9H2S9 585 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 GDPD2Q9HCC8 539 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 PDE11AQ9HCR9 933 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 TIMM13Q9Y5L4 95 aaPredicted RBP13.3□□□□□ -0.28
CBWD3-218ENST00000622755 TTC28Q96AY4 2481 aa13.29□□□□□ -0.28
CBWD3-218ENST00000622755 VCANP13611 3396 aa13.29□□□□□ -0.28
CBWD3-218ENST00000622755 FAM237AA0A1B0GTK4 181 aa13.29□□□□□ -0.28
CBWD3-218ENST00000622755 CLIC2O15247 247 aa13.29□□□□□ -0.28
CBWD3-218ENST00000622755 PHACTR2O75167 634 aa13.29□□□□□ -0.28
CBWD3-218ENST00000622755 PAPLNO95428 1278 aa13.29□□□□□ -0.28
CBWD3-218ENST00000622755 CYP11A1P05108 521 aa13.29□□□□□ -0.28
CBWD3-218ENST00000622755 DLATP10515 647 aaKnown RBP13.29□□□□□ -0.28
CBWD3-218ENST00000622755 RFX1P22670 979 aa13.29□□□□□ -0.28
CBWD3-218ENST00000622755 EPHB3P54753 998 aa13.29□□□□□ -0.28
CBWD3-218ENST00000622755 MYL7Q01449 175 aa13.29□□□□□ -0.28
CBWD3-218ENST00000622755 BFSP1Q12934 665 aa13.29□□□□□ -0.28
CBWD3-218ENST00000622755 TDGQ13569 410 aa13.29□□□□□ -0.28
CBWD3-218ENST00000622755 VEPH1Q14D04 833 aa13.29□□□□□ -0.28
CBWD3-218ENST00000622755 TAF12Q16514 161 aa13.29□□□□□ -0.28
CBWD3-218ENST00000622755 TRIM67Q6ZTA4 783 aa13.29□□□□□ -0.28
CBWD3-218ENST00000622755 MTSS1LQ765P7 747 aa13.29□□□□□ -0.28
CBWD3-218ENST00000622755 PDZD4Q76G19 769 aaPredicted RBP13.29□□□□□ -0.28
CBWD3-218ENST00000622755 EFCAB13Q8IY85 973 aa13.29□□□□□ -0.28
CBWD3-218ENST00000622755 TMEM86AQ8N2M4 240 aa13.29□□□□□ -0.28
CBWD3-218ENST00000622755 C2orf15Q8WU43 125 aaKnown RBP13.29□□□□□ -0.28
CBWD3-218ENST00000622755 MFSD1Q9H3U5 465 aa13.29□□□□□ -0.28
CBWD3-218ENST00000622755 CIZ1Q9ULV3 898 aaPredicted RBP13.29□□□□□ -0.28
CBWD3-218ENST00000622755 FRMD4BQ9Y2L6 1034 aa13.29□□□□□ -0.28
CBWD3-218ENST00000622755 MRPS23Q9Y3D9 190 aaKnown RBP13.29□□□□□ -0.28
CBWD3-218ENST00000622755 INSL5Q9Y5Q6 135 aa13.29□□□□□ -0.28
CBWD3-218ENST00000622755 TMEM221A6NGB7 291 aa13.28□□□□□ -0.28
CBWD3-218ENST00000622755 M0R296 226 aa13.28□□□□□ -0.28
CBWD3-218ENST00000622755 TBC1D4O60343 1298 aa13.28□□□□□ -0.28
CBWD3-218ENST00000622755 SMC2O95347 1197 aa13.28□□□□□ -0.28
CBWD3-218ENST00000622755 IGFBP6P24592 240 aaPredicted RBP13.28□□□□□ -0.28
CBWD3-218ENST00000622755 RPL13P26373 211 aaKnown RBP13.28□□□□□ -0.28
CBWD3-218ENST00000622755 TUFMP49411 452 aaKnown RBP13.28□□□□□ -0.28
CBWD3-218ENST00000622755 AP3M2P53677 418 aa13.28□□□□□ -0.28
CBWD3-218ENST00000622755 EHHADHQ08426 723 aa13.28□□□□□ -0.28
CBWD3-218ENST00000622755 GPR17Q13304 367 aa13.28□□□□□ -0.28
CBWD3-218ENST00000622755 TRPC3Q13507 836 aa13.28□□□□□ -0.28
CBWD3-218ENST00000622755 RSPO2Q6UXX9 243 aaPredicted RBP13.28□□□□□ -0.28
CBWD3-218ENST00000622755 CBWD2Q8IUF1 395 aa13.28□□□□□ -0.28
CBWD3-218ENST00000622755 C12orf56Q8IXR9 622 aa13.28□□□□□ -0.28
CBWD3-218ENST00000622755 GLIS3Q8NEA6 775 aa13.28□□□□□ -0.28
CBWD3-218ENST00000622755 SPATA18Q8TC71 538 aa13.28□□□□□ -0.28
CBWD3-218ENST00000622755 PBXIP1Q96AQ6 731 aa13.28□□□□□ -0.28
CBWD3-218ENST00000622755 MTMR12Q9C0I1 747 aa13.28□□□□□ -0.28
CBWD3-218ENST00000622755 INTS13Q9NVM9 706 aa13.28□□□□□ -0.28
CBWD3-218ENST00000622755 EPS15L1Q9UBC2 864 aa13.28□□□□□ -0.28
CBWD3-218ENST00000622755 FBXL21Q9UKT6 434 aa13.28□□□□□ -0.28
CBWD3-218ENST00000622755 CDH7Q9ULB5 785 aa13.28□□□□□ -0.28
CBWD3-218ENST00000622755 PDXKO00764 312 aa13.27□□□□□ -0.29
CBWD3-218ENST00000622755 PPEF2O14830 753 aa13.27□□□□□ -0.29
CBWD3-218ENST00000622755 FGF19O95750 216 aa13.27□□□□□ -0.29
CBWD3-218ENST00000622755 LAMP2P13473 410 aa13.27□□□□□ -0.29
CBWD3-218ENST00000622755 TRIM21P19474 475 aaKnown RBP13.27□□□□□ -0.29
CBWD3-218ENST00000622755 COL9A1P20849 921 aa13.27□□□□□ -0.29
CBWD3-218ENST00000622755 TWF1Q12792 350 aa13.27□□□□□ -0.29
CBWD3-218ENST00000622755 PSMD6Q15008 389 aa13.27□□□□□ -0.29
CBWD3-218ENST00000622755 RNF19BQ6ZMZ0 732 aa13.27□□□□□ -0.29
CBWD3-218ENST00000622755 ITIH5Q86UX2 942 aa13.27□□□□□ -0.29
CBWD3-218ENST00000622755 C1orf127Q8N9H9 656 aa13.27□□□□□ -0.29
CBWD3-218ENST00000622755 FAM200AQ8TCP9 573 aa13.27□□□□□ -0.29
CBWD3-218ENST00000622755 CCDC127Q96BQ5 260 aa13.27□□□□□ -0.29
CBWD3-218ENST00000622755 PGLYRP2Q96PD5 576 aa13.27□□□□□ -0.29
CBWD3-218ENST00000622755 CORO1BQ9BR76 489 aa13.27□□□□□ -0.29
CBWD3-218ENST00000622755 ASAH2Q9NR71 780 aa13.27□□□□□ -0.29
CBWD3-218ENST00000622755 HSFX1Q9UBD0 423 aa13.27□□□□□ -0.29
CBWD3-218ENST00000622755 ASB3Q9Y575 518 aa13.27□□□□□ -0.29
CBWD3-218ENST00000622755 SNX9Q9Y5X1 595 aa13.27□□□□□ -0.29
CBWD3-218ENST00000622755 SPTBN5Q9NRC6 3674 aaKnown RBP13.26□□□□□ -0.29
CBWD3-218ENST00000622755 TGFB1I1O43294 461 aa13.26□□□□□ -0.29
CBWD3-218ENST00000622755 KLRC4O43908 158 aa13.26□□□□□ -0.29
CBWD3-218ENST00000622755 KINO60870 393 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms