RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 APEX2Q9UBZ4 518 aa9.62□□□□□ -0.87
HDAC9-229ENST00000622668 RAB23Q9ULC3 237 aa9.62□□□□□ -0.87
HDAC9-229ENST00000622668 Q9Y3F1 56 aa9.62□□□□□ -0.87
HDAC9-229ENST00000622668 SYNCRIPO60506 623 aaKnown RBP9.61□□□□□ -0.87
HDAC9-229ENST00000622668 ZBED1O96006 694 aa9.61□□□□□ -0.87
HDAC9-229ENST00000622668 PTPAQ15257 358 aa9.61□□□□□ -0.87
HDAC9-229ENST00000622668 PDXDC1Q6P996 788 aa9.61□□□□□ -0.87
HDAC9-229ENST00000622668 CAPN12Q6ZSI9 719 aa9.61□□□□□ -0.87
HDAC9-229ENST00000622668 ARHGEF18Q6ZSZ5 1173 aa9.61□□□□□ -0.87
HDAC9-229ENST00000622668 GET4Q7L5D6 327 aaPredicted RBP9.61□□□□□ -0.87
HDAC9-229ENST00000622668 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.61□□□□□ -0.87
HDAC9-229ENST00000622668 SCFD1Q8WVM8 642 aa9.61□□□□□ -0.87
HDAC9-229ENST00000622668 PABPC5Q96DU9 382 aaKnown RBP9.61□□□□□ -0.87
HDAC9-229ENST00000622668 PNMA5Q96PV4 448 aa9.61□□□□□ -0.87
HDAC9-229ENST00000622668 CGRRF1Q99675 332 aa9.61□□□□□ -0.87
HDAC9-229ENST00000622668 ABCF3Q9NUQ8 709 aa9.61□□□□□ -0.87
HDAC9-229ENST00000622668 INTS13Q9NVM9 706 aa9.61□□□□□ -0.87
HDAC9-229ENST00000622668 KLHL8Q9P2G9 620 aaPredicted RBP9.61□□□□□ -0.87
HDAC9-229ENST00000622668 GIT1Q9Y2X7 761 aa9.61□□□□□ -0.87
HDAC9-229ENST00000622668 ZDHHC9Q9Y397 364 aa9.61□□□□□ -0.87
HDAC9-229ENST00000622668 PLIN4Q96Q06 1357 aa9.61□□□□□ -0.87
HDAC9-229ENST00000622668 GOLGA4Q13439 2230 aaKnown RBP9.61□□□□□ -0.87
HDAC9-229ENST00000622668 LRRC53A6NM62 1247 aa9.61□□□□□ -0.87
HDAC9-229ENST00000622668 SH3BP5O60239 455 aa9.61□□□□□ -0.87
HDAC9-229ENST00000622668 FTLP02792 175 aaPredicted RBP9.61□□□□□ -0.87
HDAC9-229ENST00000622668 BDNFP23560 247 aa9.61□□□□□ -0.87
HDAC9-229ENST00000622668 ITIH3Q06033 890 aa9.61□□□□□ -0.87
HDAC9-229ENST00000622668 GRIK3Q13003 919 aa9.61□□□□□ -0.87
HDAC9-229ENST00000622668 SPOPLQ6IQ16 392 aa9.61□□□□□ -0.87
HDAC9-229ENST00000622668 TMC5Q6UXY8 1006 aa9.61□□□□□ -0.87
HDAC9-229ENST00000622668 SV2AQ7L0J3 742 aa9.61□□□□□ -0.87
HDAC9-229ENST00000622668 TAS1R2Q8TE23 839 aa9.61□□□□□ -0.87
HDAC9-229ENST00000622668 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.61□□□□□ -0.87
HDAC9-229ENST00000622668 TTPALQ9BTX7 342 aa9.61□□□□□ -0.87
HDAC9-229ENST00000622668 FAM8A1Q9UBU6 413 aa9.61□□□□□ -0.87
HDAC9-229ENST00000622668 TNFSF13BQ9Y275 285 aa9.61□□□□□ -0.87
HDAC9-229ENST00000622668 SLC27A5Q9Y2P5 690 aa9.61□□□□□ -0.87
HDAC9-229ENST00000622668 MYH14Q7Z406 1995 aaKnown RBP9.61□□□□□ -0.87
HDAC9-229ENST00000622668 TISP43B9A030 160 aa9.61□□□□□ -0.87
HDAC9-229ENST00000622668 FOXP2O15409 715 aa9.61□□□□□ -0.87
HDAC9-229ENST00000622668 RHOXF2BP0C7M4 288 aa9.61□□□□□ -0.87
HDAC9-229ENST00000622668 SLC9A1P19634 815 aa9.61□□□□□ -0.87
HDAC9-229ENST00000622668 STARD3Q14849 445 aa9.61□□□□□ -0.87
HDAC9-229ENST00000622668 WSCD1Q658N2 575 aa9.61□□□□□ -0.87
HDAC9-229ENST00000622668 CNKSR3Q6P9H4 555 aa9.61□□□□□ -0.87
HDAC9-229ENST00000622668 ARHGAP18Q8N392 663 aa9.61□□□□□ -0.87
HDAC9-229ENST00000622668 CPA5Q8WXQ8 436 aa9.61□□□□□ -0.87
HDAC9-229ENST00000622668 TTC1Q99614 292 aa9.61□□□□□ -0.87
HDAC9-229ENST00000622668 RHOXF2Q9BQY4 288 aa9.61□□□□□ -0.87
HDAC9-229ENST00000622668 PGAP2Q9UHJ9 254 aa9.61□□□□□ -0.87
HDAC9-229ENST00000622668 PLA2G4CQ9UP65 541 aa9.61□□□□□ -0.87
HDAC9-229ENST00000622668 ZNF536O15090 1300 aa9.61□□□□□ -0.87
HDAC9-229ENST00000622668 FRMPD4Q14CM0 1322 aa9.61□□□□□ -0.87
HDAC9-229ENST00000622668 SLX4Q8IY92 1834 aa9.61□□□□□ -0.87
HDAC9-229ENST00000622668 KNL1Q8NG31 2342 aa9.6□□□□□ -0.87
HDAC9-229ENST00000622668 DFFAO00273 331 aa9.6□□□□□ -0.87
HDAC9-229ENST00000622668 ASMTLO95671 621 aa9.6□□□□□ -0.87
HDAC9-229ENST00000622668 ADCY8P40145 1251 aa9.6□□□□□ -0.87
HDAC9-229ENST00000622668 PCBP1Q15365 356 aaKnown RBP eCLIP9.6□□□□□ -0.87
HDAC9-229ENST00000622668 TMCO3Q6UWJ1 677 aa9.6□□□□□ -0.87
HDAC9-229ENST00000622668 SLC39A5Q6ZMH5 540 aa9.6□□□□□ -0.87
HDAC9-229ENST00000622668 WDR49Q8IV35 697 aa9.6□□□□□ -0.87
HDAC9-229ENST00000622668 TRIM58Q8NG06 486 aa9.6□□□□□ -0.87
HDAC9-229ENST00000622668 ELMO3Q96BJ8 720 aa9.6□□□□□ -0.87
HDAC9-229ENST00000622668 CEP72Q9P209 647 aa9.6□□□□□ -0.87
HDAC9-229ENST00000622668 ITGA11Q9UKX5 1188 aa9.6□□□□□ -0.87
HDAC9-229ENST00000622668 CDY1Q9Y6F8 540 aa9.6□□□□□ -0.87
HDAC9-229ENST00000622668 COL1A2P08123 1366 aa9.6□□□□□ -0.87
HDAC9-229ENST00000622668 CYP3A7-CYP3A51PA0A087WV96 503 aa9.6□□□□□ -0.87
HDAC9-229ENST00000622668 HSPA8P11142 646 aaKnown RBP9.6□□□□□ -0.87
HDAC9-229ENST00000622668 CYP3A7P24462 503 aa9.6□□□□□ -0.87
HDAC9-229ENST00000622668 ACADSBP45954 432 aa9.6□□□□□ -0.87
HDAC9-229ENST00000622668 VAV2P52735 878 aa9.6□□□□□ -0.87
HDAC9-229ENST00000622668 CDH8P55286 799 aa9.6□□□□□ -0.87
HDAC9-229ENST00000622668 ZNF445P59923 1031 aa9.6□□□□□ -0.87
HDAC9-229ENST00000622668 TPI1P60174 286 aa9.6□□□□□ -0.87
HDAC9-229ENST00000622668 SNX1Q13596 522 aa9.6□□□□□ -0.87
HDAC9-229ENST00000622668 C8orf74Q6P047 294 aa9.6□□□□□ -0.87
HDAC9-229ENST00000622668 TRIM72Q6ZMU5 477 aa9.6□□□□□ -0.87
HDAC9-229ENST00000622668 ETNPPLQ8TBG4 499 aa9.6□□□□□ -0.87
HDAC9-229ENST00000622668 MTMR9Q96QG7 549 aa9.6□□□□□ -0.87
HDAC9-229ENST00000622668 HSD17B14Q9BPX1 270 aa9.6□□□□□ -0.87
HDAC9-229ENST00000622668 BRD9Q9H8M2 597 aa9.6□□□□□ -0.87
HDAC9-229ENST00000622668 GOLGA2P5Q9HBQ8 144 aa9.6□□□□□ -0.87
HDAC9-229ENST00000622668 CHORDC1Q9UHD1 332 aaPredicted RBP9.6□□□□□ -0.87
HDAC9-229ENST00000622668 FOSL2P15408 326 aa9.6□□□□□ -0.87
HDAC9-229ENST00000622668 CYP24A1Q07973 514 aa9.6□□□□□ -0.87
HDAC9-229ENST00000622668 CUL2Q13617 745 aa9.6□□□□□ -0.87
HDAC9-229ENST00000622668 MMS22LQ6ZRQ5 1243 aa9.6□□□□□ -0.87
HDAC9-229ENST00000622668 BCAS3Q9H6U6 928 aa9.6□□□□□ -0.87
HDAC9-229ENST00000622668 PLCB1Q9NQ66 1216 aa9.6□□□□□ -0.87
HDAC9-229ENST00000622668 OLFML3Q9NRN5 406 aa9.6□□□□□ -0.87
HDAC9-229ENST00000622668 NUDT5Q9UKK9 219 aa9.6□□□□□ -0.87
HDAC9-229ENST00000622668 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.59□□□□□ -0.87
HDAC9-229ENST00000622668 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.59□□□□□ -0.87
HDAC9-229ENST00000622668 TBC1D3BA6NDS4 549 aa9.59□□□□□ -0.87
HDAC9-229ENST00000622668 KRIT1O00522 736 aa9.59□□□□□ -0.87
HDAC9-229ENST00000622668 ZNF862O60290 1169 aa9.59□□□□□ -0.87
HDAC9-229ENST00000622668 ENDOD1O94919 500 aa9.59□□□□□ -0.87
HDAC9-229ENST00000622668 YWHAQP27348 245 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms