RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 TRIP13Q15645 432 aaPredicted RBP7.49□□□□□ -1.21
COLCA1-205ENST00000620864 ZFP1Q6P2D0 407 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 UNC13DQ70J99 1090 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 KRT77Q7Z794 578 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 IFNL3Q8IZI9 196 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 TAB3Q8N5C8 712 aaPredicted RBP7.49□□□□□ -1.21
COLCA1-205ENST00000620864 TRPC4APQ8TEL6 797 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 ZBTB10Q96DT7 871 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 EGFL8Q99944 293 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 FRMD8P1Q9BZ68 369 aaPredicted RBP7.49□□□□□ -1.21
COLCA1-205ENST00000620864 VCPKMTQ9H867 229 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 HMX1Q9NP08 348 aaPredicted RBP7.49□□□□□ -1.21
COLCA1-205ENST00000620864 KRT84Q9NSB2 600 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 CNOT8Q9UFF9 292 aaKnown RBP7.49□□□□□ -1.21
COLCA1-205ENST00000620864 VAV3Q9UKW4 847 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 PCDHA1Q9Y5I3 950 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 CDC42BPGQ6DT37 1551 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 DENND3A2RUS2 1198 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 HPCAP84074 193 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 PLOD1Q02809 727 aaPredicted RBP7.49□□□□□ -1.21
COLCA1-205ENST00000620864 RESTQ13127 1097 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 SF3B3Q15393 1217 aaKnown RBP7.49□□□□□ -1.21
COLCA1-205ENST00000620864 STXBP2Q15833 593 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 PTPROQ16827 1216 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 RESP18Q5W5W9 173 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 PRMT9Q6P2P2 845 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 KRT78Q8N1N4 520 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 INPP5DQ92835 1189 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 EXT2Q93063 718 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 THTPAQ9BU02 230 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 COA1Q9GZY4 146 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 RPRD1BQ9NQG5 326 aaKnown RBP7.49□□□□□ -1.21
COLCA1-205ENST00000620864 RABL2AQ9UBK7 228 aaPredicted RBP7.49□□□□□ -1.21
COLCA1-205ENST00000620864 IPPQ9Y573 584 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 ADCY10Q96PN6 1610 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 TNKSO95271 1327 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 SLCO1B7G3V0H7 640 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 RGS2P41220 211 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 ZAP70P43403 619 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 PEX5P50542 639 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 RAD23AP54725 363 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 FOXD4Q12950 439 aaPredicted RBP7.49□□□□□ -1.21
COLCA1-205ENST00000620864 PDAP1Q13442 181 aaKnown RBP7.49□□□□□ -1.21
COLCA1-205ENST00000620864 ZBED8Q8IZ13 594 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 MOSPD2Q8NHP6 518 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 DGCR14Q96DF8 476 aaKnown RBP7.49□□□□□ -1.21
COLCA1-205ENST00000620864 DDX50Q9BQ39 737 aaKnown RBP7.49□□□□□ -1.21
COLCA1-205ENST00000620864 OSBPL3Q9H4L5 887 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 HERC5Q9UII4 1024 aaKnown RBP7.49□□□□□ -1.21
COLCA1-205ENST00000620864 GRID1Q9ULK0 1009 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 LCA5LO95447 670 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 MYL2P10916 166 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 CHN1P15882 459 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 USP39Q53GS9 565 aaKnown RBP7.48□□□□□ -1.21
COLCA1-205ENST00000620864 PMF1Q6P1K2 205 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 ILDR2Q71H61 639 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 TRIM51Q9BSJ1 452 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 USP44Q9H0E7 712 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 TDRD3Q9H7E2 651 aaKnown RBP7.48□□□□□ -1.21
COLCA1-205ENST00000620864 DNMT1P26358 1616 aaKnown RBP7.48□□□□□ -1.21
COLCA1-205ENST00000620864 RNF17Q9BXT8 1623 aaKnown RBP7.48□□□□□ -1.21
COLCA1-205ENST00000620864 BTBD18B2RXH4 712 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 PGM3O95394 542 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 EPHX2P34913 555 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 TRIM25Q14258 630 aaKnown RBP7.48□□□□□ -1.21
COLCA1-205ENST00000620864 WASHC2DQ5SRD0 308 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 TTC39BQ5VTQ0 682 aaPredicted RBP7.48□□□□□ -1.21
COLCA1-205ENST00000620864 SUSD4Q5VX71 490 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 IZUMO3Q5VZ72 239 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 CYP4Z2PQ8N1L4 340 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 SETD9Q8NE22 299 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 RPF1Q9H9Y2 349 aaKnown RBP7.48□□□□□ -1.21
COLCA1-205ENST00000620864 FBXO28Q9NVF7 368 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 HDAC6Q9UBN7 1215 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 DAPK2Q9UIK4 370 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 SPDYE5A6NIY4 337 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 STX11O75558 287 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 THRAP10827 490 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 CCT3P49368 545 aaKnown RBP7.48□□□□□ -1.21
COLCA1-205ENST00000620864 SPDYE7PQ495Y7 208 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 IRAK1BP1Q5VVH5 260 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 ZC3H14Q6PJT7 736 aaKnown RBP7.48□□□□□ -1.21
COLCA1-205ENST00000620864 GAS2L3Q86XJ1 694 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 RCOR2Q8IZ40 523 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 ZCCHC7Q8N3Z6 543 aaKnown RBP7.48□□□□□ -1.21
COLCA1-205ENST00000620864 WDR60Q8WVS4 1066 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 SERPINB12Q96P63 405 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 AP3M1Q9Y2T2 418 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 SPATA31A5Q5VU36 1347 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 SPATA31A7Q8IWB4 1347 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 SYNDIG1LA6NDD5 238 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 PHF2O75151 1096 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 GHRP10912 638 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 CACNB3P54284 484 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 MEI1Q5TIA1 1274 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 C7orf31Q8N865 590 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 ERP27Q96DN0 273 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 MOCOSQ96EN8 888 aa7.48□□□□□ -1.21
COLCA1-205ENST00000620864 DMAP1Q9NPF5 467 aaPredicted RBP7.48□□□□□ -1.21
COLCA1-205ENST00000620864 PARVAQ9NVD7 372 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms