RNA–Protein interactions for RNA: ENST00000619887.4

CDH23-213, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-213ENST00000619887 RARAP10276 462 aa10.5□□□□□ -0.73
CDH23-213ENST00000619887 WDR72Q3MJ13 1102 aa10.5□□□□□ -0.73
CDH23-213ENST00000619887 RIBC1Q8N443 379 aaPredicted RBP10.5□□□□□ -0.73
CDH23-213ENST00000619887 PYROXD1Q8WU10 500 aa10.5□□□□□ -0.73
CDH23-213ENST00000619887 SREK1Q8WXA9 508 aaKnown RBP10.5□□□□□ -0.73
CDH23-213ENST00000619887 AP5M1Q9H0R1 490 aa10.5□□□□□ -0.73
CDH23-213ENST00000619887 ADARB2Q9NS39 739 aaKnown RBP10.5□□□□□ -0.73
CDH23-213ENST00000619887 TBK1Q9UHD2 729 aa10.5□□□□□ -0.73
CDH23-213ENST00000619887 TMEM59LQ9UK28 342 aa10.5□□□□□ -0.73
CDH23-213ENST00000619887 A6NJR5 290 aa10.5□□□□□ -0.73
CDH23-213ENST00000619887 M0QYV0 167 aa10.5□□□□□ -0.73
CDH23-213ENST00000619887 CXCL11O14625 94 aa10.5□□□□□ -0.73
CDH23-213ENST00000619887 BRAFP15056 766 aa10.5□□□□□ -0.73
CDH23-213ENST00000619887 CHN1P15882 459 aa10.5□□□□□ -0.73
CDH23-213ENST00000619887 GLRA2P23416 452 aa10.5□□□□□ -0.73
CDH23-213ENST00000619887 ARSEP51690 589 aa10.5□□□□□ -0.73
CDH23-213ENST00000619887 ITGA8P53708 1063 aa10.5□□□□□ -0.73
CDH23-213ENST00000619887 COPS2P61201 443 aa10.5□□□□□ -0.73
CDH23-213ENST00000619887 DGKZQ13574 1117 aa10.5□□□□□ -0.73
CDH23-213ENST00000619887 DARS2Q6PI48 645 aaKnown RBP10.5□□□□□ -0.73
CDH23-213ENST00000619887 ALG3Q92685 438 aa10.5□□□□□ -0.73
CDH23-213ENST00000619887 SEMA4DQ92854 862 aa10.5□□□□□ -0.73
CDH23-213ENST00000619887 MROH8Q9H579 483 aa10.5□□□□□ -0.73
CDH23-213ENST00000619887 RIPK3Q9Y572 518 aa10.5□□□□□ -0.73
CDH23-213ENST00000619887 GH1P01241 217 aa10.5□□□□□ -0.73
CDH23-213ENST00000619887 UBA1P22314 1058 aaKnown RBP10.5□□□□□ -0.73
CDH23-213ENST00000619887 CTAGE3PQ8IX95 158 aa10.5□□□□□ -0.73
CDH23-213ENST00000619887 LRRC71Q8N4P6 559 aa10.5□□□□□ -0.73
CDH23-213ENST00000619887 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.5□□□□□ -0.73
CDH23-213ENST00000619887 PRELID2Q8N945 189 aa10.5□□□□□ -0.73
CDH23-213ENST00000619887 HELQQ8TDG4 1101 aa10.5□□□□□ -0.73
CDH23-213ENST00000619887 KLRG1Q96E93 195 aa10.5□□□□□ -0.73
CDH23-213ENST00000619887 FRMD8P1Q9BZ68 369 aaPredicted RBP10.5□□□□□ -0.73
CDH23-213ENST00000619887 GPRC5DQ9NZD1 345 aa10.5□□□□□ -0.73
CDH23-213ENST00000619887 PABPN1LA6NDY0 278 aaKnown RBP10.49□□□□□ -0.73
CDH23-213ENST00000619887 SMAPO00193 183 aa10.49□□□□□ -0.73
CDH23-213ENST00000619887 SSTR3P32745 418 aaPredicted RBP10.49□□□□□ -0.73
CDH23-213ENST00000619887 ICAM3P32942 547 aa10.49□□□□□ -0.73
CDH23-213ENST00000619887 MSH2P43246 934 aa10.49□□□□□ -0.73
CDH23-213ENST00000619887 RPL21P46778 160 aaKnown RBP10.49□□□□□ -0.73
CDH23-213ENST00000619887 CNTN2Q02246 1040 aa10.49□□□□□ -0.73
CDH23-213ENST00000619887 MAP3K10Q02779 954 aa10.49□□□□□ -0.73
CDH23-213ENST00000619887 LAMC2Q13753 1193 aa10.49□□□□□ -0.73
CDH23-213ENST00000619887 SPOPLQ6IQ16 392 aa10.49□□□□□ -0.73
CDH23-213ENST00000619887 EFCAB12Q6NXP0 572 aa10.49□□□□□ -0.73
CDH23-213ENST00000619887 ASAP3Q8TDY4 903 aa10.49□□□□□ -0.73
CDH23-213ENST00000619887 PGM2Q96G03 612 aa10.49□□□□□ -0.73
CDH23-213ENST00000619887 PCDHB18PQ96TA0 734 aa10.49□□□□□ -0.73
CDH23-213ENST00000619887 MTMR12Q9C0I1 747 aa10.49□□□□□ -0.73
CDH23-213ENST00000619887 SSX2IPQ9Y2D8 614 aa10.49□□□□□ -0.73
CDH23-213ENST00000619887 RASA4BC9J798 803 aa10.49□□□□□ -0.73
CDH23-213ENST00000619887 PI4K2BG5E9Z4 385 aa10.49□□□□□ -0.73
CDH23-213ENST00000619887 RASA4O43374 803 aa10.49□□□□□ -0.73
CDH23-213ENST00000619887 SHOX2O60902 331 aaPredicted RBP10.49□□□□□ -0.73
CDH23-213ENST00000619887 INHBAP08476 426 aa10.49□□□□□ -0.73
CDH23-213ENST00000619887 BRD2P25440 801 aaKnown RBP10.49□□□□□ -0.73
CDH23-213ENST00000619887 RASSF2P50749 326 aa10.49□□□□□ -0.73
CDH23-213ENST00000619887 SEC24CP53992 1094 aa10.49□□□□□ -0.73
CDH23-213ENST00000619887 BASP1P80723 227 aaKnown RBP10.49□□□□□ -0.73
CDH23-213ENST00000619887 RBP5P82980 135 aa10.49□□□□□ -0.73
CDH23-213ENST00000619887 KLHL38Q2WGJ6 581 aa10.49□□□□□ -0.73
CDH23-213ENST00000619887 ZNF484Q5JVG2 852 aa10.49□□□□□ -0.73
CDH23-213ENST00000619887 NUGGCQ68CJ6 796 aa10.49□□□□□ -0.73
CDH23-213ENST00000619887 B3GNT9Q6UX72 402 aa10.49□□□□□ -0.73
CDH23-213ENST00000619887 FIZ1Q96SL8 496 aa10.49□□□□□ -0.73
CDH23-213ENST00000619887 ELAC2Q9BQ52 826 aaKnown RBP10.49□□□□□ -0.73
CDH23-213ENST00000619887 LRRC19Q9H756 370 aa10.49□□□□□ -0.73
CDH23-213ENST00000619887 NOCTQ9UK39 431 aaKnown RBP10.49□□□□□ -0.73
CDH23-213ENST00000619887 SBF2Q86WG5 1849 aa10.49□□□□□ -0.73
CDH23-213ENST00000619887 ZNF862O60290 1169 aa10.49□□□□□ -0.73
CDH23-213ENST00000619887 GHRHRQ02643 423 aa10.49□□□□□ -0.73
CDH23-213ENST00000619887 LAMTOR4Q0VGL1 99 aa10.49□□□□□ -0.73
CDH23-213ENST00000619887 SPARCL1Q14515 664 aa10.49□□□□□ -0.73
CDH23-213ENST00000619887 P3H1Q32P28 736 aa10.49□□□□□ -0.73
CDH23-213ENST00000619887 CATSPER4Q7RTX7 472 aa10.49□□□□□ -0.73
CDH23-213ENST00000619887 CEP57Q86XR8 500 aa10.49□□□□□ -0.73
CDH23-213ENST00000619887 BSNDQ8WZ55 320 aa10.49□□□□□ -0.73
CDH23-213ENST00000619887 RBM15Q96T37 977 aaKnown RBP eCLIP10.49□□□□□ -0.73
CDH23-213ENST00000619887 DCLK3Q9C098 648 aa10.49□□□□□ -0.73
CDH23-213ENST00000619887 CAND2O75155 1236 aa10.48□□□□□ -0.73
CDH23-213ENST00000619887 NUDT17P0C025 328 aa10.48□□□□□ -0.73
CDH23-213ENST00000619887 YWHAGP61981 247 aaKnown RBP eCLIP10.48□□□□□ -0.73
CDH23-213ENST00000619887 CDC42EP1Q00587 391 aa10.48□□□□□ -0.73
CDH23-213ENST00000619887 SNAPC2Q13487 334 aa10.48□□□□□ -0.73
CDH23-213ENST00000619887 CCDC6Q16204 474 aa10.48□□□□□ -0.73
CDH23-213ENST00000619887 FAM102AQ5T9C2 384 aaPredicted RBP10.48□□□□□ -0.73
CDH23-213ENST00000619887 SRRM1Q8IYB3 904 aaKnown RBP10.48□□□□□ -0.73
CDH23-213ENST00000619887 ATP11CQ8NB49 1132 aa10.48□□□□□ -0.73
CDH23-213ENST00000619887 BEST2Q8NFU1 509 aa10.48□□□□□ -0.73
CDH23-213ENST00000619887 ZNF606Q8WXB4 792 aa10.48□□□□□ -0.73
CDH23-213ENST00000619887 HSPH1Q92598 858 aa10.48□□□□□ -0.73
CDH23-213ENST00000619887 SNX25Q9H3E2 840 aa10.48□□□□□ -0.73
CDH23-213ENST00000619887 SPON1Q9HCB6 807 aa10.48□□□□□ -0.73
CDH23-213ENST00000619887 CISHQ9NSE2 258 aa10.48□□□□□ -0.73
CDH23-213ENST00000619887 TPX2Q9ULW0 747 aaKnown RBP10.48□□□□□ -0.73
CDH23-213ENST00000619887 PDE4DIPQ5VU43 2346 aa10.48□□□□□ -0.73
CDH23-213ENST00000619887 ATP11AP98196 1134 aa10.48□□□□□ -0.73
CDH23-213ENST00000619887 TMEM132DQ14C87 1099 aa10.48□□□□□ -0.73
CDH23-213ENST00000619887 BBS9Q3SYG4 887 aa10.48□□□□□ -0.73
CDH23-213ENST00000619887 C6orf163Q5TEZ5 329 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms