RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 UBE2TQ9NPD8 197 aaPredicted RBP7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 DNAJC17Q9NVM6 304 aaKnown RBP7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 GTPBP10A4D1E9 387 aaKnown RBP7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 LRRD1A4D1F6 860 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 ADORA2AP29274 412 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 FMO5P49326 533 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 RWDD2BP57060 319 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 RIPK1Q13546 671 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 RGMBQ6NW40 437 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 B3GNT9Q6UX72 402 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 C4orf19Q8IY42 314 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 SRRM1Q8IYB3 904 aaKnown RBP7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 AGAP11Q8TF27 550 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 SLC35C1Q96A29 364 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 ZNF653Q96CK0 615 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 FAM167BQ9BTA0 163 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 WNT8AQ9H1J5 351 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 ZNF302Q9NR11 478 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 KCNG1Q9UIX4 513 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 TTC7AQ9ULT0 858 aaPredicted RBP7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 PCDHGA10Q9Y5H3 936 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 SCN4AP35499 1836 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 ASB14A6NK59 587 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 K7ENM7 598 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 SNX3O60493 162 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 TRIM49P0CI25 452 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 TRIM49CP0CI26 452 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 TXNP10599 105 aaKnown RBP7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 KRT15P19012 456 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 UBA1P22314 1058 aaKnown RBP7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 MSH2P43246 934 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 CASP5P51878 434 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 MXRA7P84157 204 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 TCEAL1Q15170 157 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 C21orf62-AS1Q17RA5 79 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 MUM1Q2TAK8 710 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 ACCSLQ4AC99 568 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 ZC2HC1CQ53FD0 456 aaPredicted RBP7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 FYB2Q5VWT5 728 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 PPP2R2DQ66LE6 453 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 KSR1Q8IVT5 923 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 RDM1Q8NG50 284 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 KIFAP3Q92845 792 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 GRAMD1AQ96CP6 724 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 AGPAT1Q99943 283 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 YIPF3Q9GZM5 350 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 VCXQ9H320 206 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 GPRC5CQ9NQ84 441 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 APEX2Q9UBZ4 518 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 TELO2Q9Y4R8 837 aa7.41□□□□□ -1.22
SRGAP3-213ENST00000618999 O00370 1275 aa7.4□□□□□ -1.22
SRGAP3-213ENST00000618999 SCAMP3O14828 347 aaKnown RBP7.4□□□□□ -1.22
SRGAP3-213ENST00000618999 KIAA0391O15091 583 aaKnown RBP7.4□□□□□ -1.22
SRGAP3-213ENST00000618999 RIPK2O43353 540 aa7.4□□□□□ -1.22
SRGAP3-213ENST00000618999 LILRB3O75022 631 aa7.4□□□□□ -1.22
SRGAP3-213ENST00000618999 SKAP2O75563 359 aaPredicted RBP7.4□□□□□ -1.22
SRGAP3-213ENST00000618999 ATP5HO75947 161 aa7.4□□□□□ -1.22
SRGAP3-213ENST00000618999 MARK3P27448 753 aa7.4□□□□□ -1.22
SRGAP3-213ENST00000618999 DRG2P55039 364 aaKnown RBP7.4□□□□□ -1.22
SRGAP3-213ENST00000618999 PEX3P56589 373 aa7.4□□□□□ -1.22
SRGAP3-213ENST00000618999 RBBP5Q15291 538 aaKnown RBP7.4□□□□□ -1.22
SRGAP3-213ENST00000618999 SPRED3Q2MJR0 410 aa7.4□□□□□ -1.22
SRGAP3-213ENST00000618999 HHATQ5VTY9 493 aa7.4□□□□□ -1.22
SRGAP3-213ENST00000618999 NAIF1Q69YI7 327 aaPredicted RBP7.4□□□□□ -1.22
SRGAP3-213ENST00000618999 EP400NLQ6ZTU2 488 aa7.4□□□□□ -1.22
SRGAP3-213ENST00000618999 FAM47EQ6ZV65 393 aa7.4□□□□□ -1.22
SRGAP3-213ENST00000618999 SLFN11Q7Z7L1 901 aa7.4□□□□□ -1.22
SRGAP3-213ENST00000618999 CCDC60Q8IWA6 550 aaPredicted RBP7.4□□□□□ -1.22
SRGAP3-213ENST00000618999 SHCBP1Q8NEM2 672 aa7.4□□□□□ -1.22
SRGAP3-213ENST00000618999 MORC4Q8TE76 937 aa7.4□□□□□ -1.22
SRGAP3-213ENST00000618999 PTPN18Q99952 460 aa7.4□□□□□ -1.22
SRGAP3-213ENST00000618999 MAF1Q9H063 256 aa7.4□□□□□ -1.22
SRGAP3-213ENST00000618999 ANAPC5Q9UJX4 755 aa7.4□□□□□ -1.22
SRGAP3-213ENST00000618999 ASTN1O14525 1302 aa7.4□□□□□ -1.22
SRGAP3-213ENST00000618999 KIF3CO14782 793 aa7.4□□□□□ -1.22
SRGAP3-213ENST00000618999 STK10O94804 968 aaKnown RBP7.4□□□□□ -1.22
SRGAP3-213ENST00000618999 SUPT20HL2P0C7V6 817 aa7.4□□□□□ -1.22
SRGAP3-213ENST00000618999 GJC1P36383 396 aa7.4□□□□□ -1.22
SRGAP3-213ENST00000618999 RPL21P46778 160 aaKnown RBP7.4□□□□□ -1.22
SRGAP3-213ENST00000618999 KCNJ2P63252 427 aa7.4□□□□□ -1.22
SRGAP3-213ENST00000618999 PRKCEQ02156 737 aa7.4□□□□□ -1.22
SRGAP3-213ENST00000618999 ZBTB16Q05516 673 aa7.4□□□□□ -1.22
SRGAP3-213ENST00000618999 PPM1KQ8N3J5 372 aa7.4□□□□□ -1.22
SRGAP3-213ENST00000618999 BBOF1Q8ND07 529 aa7.4□□□□□ -1.22
SRGAP3-213ENST00000618999 ATXN2LQ8WWM7 1075 aaKnown RBP7.4□□□□□ -1.22
SRGAP3-213ENST00000618999 SPATA33Q96N06 139 aa7.4□□□□□ -1.22
SRGAP3-213ENST00000618999 SERPINB12Q96P63 405 aa7.4□□□□□ -1.22
SRGAP3-213ENST00000618999 SMAD5Q99717 465 aaKnown RBP7.4□□□□□ -1.22
SRGAP3-213ENST00000618999 ZSWIM1Q9BR11 485 aa7.4□□□□□ -1.22
SRGAP3-213ENST00000618999 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.4□□□□□ -1.22
SRGAP3-213ENST00000618999 KCND2Q9NZV8 630 aa7.4□□□□□ -1.22
SRGAP3-213ENST00000618999 SLC12A4Q9UP95 1085 aa7.4□□□□□ -1.22
SRGAP3-213ENST00000618999 MANSC4A6NHS7 340 aaPredicted RBP7.4□□□□□ -1.23
SRGAP3-213ENST00000618999 STRNO43815 780 aa7.4□□□□□ -1.23
SRGAP3-213ENST00000618999 TGFB3P10600 412 aa7.4□□□□□ -1.23
SRGAP3-213ENST00000618999 COMTP21964 271 aa7.4□□□□□ -1.23
SRGAP3-213ENST00000618999 PAX3P23760 479 aa7.4□□□□□ -1.23
SRGAP3-213ENST00000618999 STAT5BP51692 787 aa7.4□□□□□ -1.23
SRGAP3-213ENST00000618999 POLGP54098 1239 aaPredicted RBP7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms