RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 C4BPAP04003 597 aaKnown RBP8.9□□□□□ -0.98
NEK3-209ENST00000618856 HNRNPA1P09651 372 aaKnown RBP eCLIP8.9□□□□□ -0.98
NEK3-209ENST00000618856 FAM163BP0C2L3 166 aa8.9□□□□□ -0.98
NEK3-209ENST00000618856 ODC1P11926 461 aa8.9□□□□□ -0.98
NEK3-209ENST00000618856 ATF2P15336 505 aa8.9□□□□□ -0.98
NEK3-209ENST00000618856 POLR2BP30876 1174 aaKnown RBP8.9□□□□□ -0.98
NEK3-209ENST00000618856 CA8P35219 290 aa8.9□□□□□ -0.98
NEK3-209ENST00000618856 PRCPP42785 496 aa8.9□□□□□ -0.98
NEK3-209ENST00000618856 MTHFRP42898 656 aa8.9□□□□□ -0.98
NEK3-209ENST00000618856 CASP4P49662 377 aa8.9□□□□□ -0.98
NEK3-209ENST00000618856 AP3M2P53677 418 aa8.9□□□□□ -0.98
NEK3-209ENST00000618856 RBP5P82980 135 aa8.9□□□□□ -0.98
NEK3-209ENST00000618856 YWHAHQ04917 246 aaPredicted RBP8.9□□□□□ -0.98
NEK3-209ENST00000618856 GPR17Q13304 367 aa8.9□□□□□ -0.98
NEK3-209ENST00000618856 SV2CQ496J9 727 aa8.9□□□□□ -0.98
NEK3-209ENST00000618856 TPGS2Q68CL5 300 aa8.9□□□□□ -0.98
NEK3-209ENST00000618856 ZNF280DQ6N043 979 aa8.9□□□□□ -0.98
NEK3-209ENST00000618856 CES5AQ6NT32 575 aa8.9□□□□□ -0.98
NEK3-209ENST00000618856 EP400NLQ6ZTU2 488 aa8.9□□□□□ -0.98
NEK3-209ENST00000618856 DPH6Q7L8W6 267 aa8.9□□□□□ -0.98
NEK3-209ENST00000618856 TRAPPC11Q7Z392 1133 aa8.9□□□□□ -0.98
NEK3-209ENST00000618856 TCEAL8Q8IYN2 117 aa8.9□□□□□ -0.98
NEK3-209ENST00000618856 SMYD4Q8IYR2 804 aaPredicted RBP8.9□□□□□ -0.98
NEK3-209ENST00000618856 TMC2Q8TDI7 906 aa8.9□□□□□ -0.98
NEK3-209ENST00000618856 ERCC4Q92889 916 aaPredicted RBP8.9□□□□□ -0.98
NEK3-209ENST00000618856 SMARCE1Q969G3 411 aa8.9□□□□□ -0.98
NEK3-209ENST00000618856 FAM84AQ96KN4 292 aa8.9□□□□□ -0.98
NEK3-209ENST00000618856 ZNF560Q96MR9 790 aa8.9□□□□□ -0.98
NEK3-209ENST00000618856 NECAB3Q96P71 396 aaPredicted RBP8.9□□□□□ -0.98
NEK3-209ENST00000618856 POP1Q99575 1024 aaKnown RBP8.9□□□□□ -0.98
NEK3-209ENST00000618856 MKNK1Q9BUB5 465 aa8.9□□□□□ -0.98
NEK3-209ENST00000618856 PRKD2Q9BZL6 878 aa8.9□□□□□ -0.98
NEK3-209ENST00000618856 MTMR12Q9C0I1 747 aa8.9□□□□□ -0.98
NEK3-209ENST00000618856 XYLT2Q9H1B5 865 aa8.9□□□□□ -0.98
NEK3-209ENST00000618856 LMBRD1Q9NUN5 540 aa8.9□□□□□ -0.98
NEK3-209ENST00000618856 HSFX1Q9UBD0 423 aa8.9□□□□□ -0.98
NEK3-209ENST00000618856 AFF4Q9UHB7 1163 aaKnown RBP8.9□□□□□ -0.98
NEK3-209ENST00000618856 CDH22Q9UJ99 828 aa8.9□□□□□ -0.98
NEK3-209ENST00000618856 MAN1B1Q9UKM7 699 aa8.9□□□□□ -0.98
NEK3-209ENST00000618856 DSEQ9UL01 958 aa8.9□□□□□ -0.98
NEK3-209ENST00000618856 AGAP1Q9UPQ3 857 aa8.9□□□□□ -0.98
NEK3-209ENST00000618856 USTQ9Y2C2 406 aa8.9□□□□□ -0.98
NEK3-209ENST00000618856 TCF20Q9UGU0 1960 aaKnown RBP8.9□□□□□ -0.99
NEK3-209ENST00000618856 CCDC195A0A1B0GUA6 201 aa8.89□□□□□ -0.99
NEK3-209ENST00000618856 PPP1R3GB7ZBB8 358 aa8.89□□□□□ -0.99
NEK3-209ENST00000618856 TNFRSF10AO00220 468 aa8.89□□□□□ -0.99
NEK3-209ENST00000618856 DLL1O00548 723 aa8.89□□□□□ -0.99
NEK3-209ENST00000618856 CYB561D2O14569 222 aa8.89□□□□□ -0.99
NEK3-209ENST00000618856 RFPL2O75678 378 aa8.89□□□□□ -0.99
NEK3-209ENST00000618856 SPATA31D3P0C874 917 aa8.89□□□□□ -0.99
NEK3-209ENST00000618856 CD44P16070 742 aaKnown RBP8.89□□□□□ -0.99
NEK3-209ENST00000618856 NR2F2P24468 414 aa8.89□□□□□ -0.99
NEK3-209ENST00000618856 PPP1R2P41236 205 aa8.89□□□□□ -0.99
NEK3-209ENST00000618856 DLG4P78352 724 aa8.89□□□□□ -0.99
NEK3-209ENST00000618856 ZACNQ401N2 412 aa8.89□□□□□ -0.99
NEK3-209ENST00000618856 CTXN3Q4LDR2 81 aa8.89□□□□□ -0.99
NEK3-209ENST00000618856 ATAT1Q5SQI0 421 aa8.89□□□□□ -0.99
NEK3-209ENST00000618856 RARS2Q5T160 578 aaKnown RBP8.89□□□□□ -0.99
NEK3-209ENST00000618856 OVOS1Q6IE37 1185 aa8.89□□□□□ -0.99
NEK3-209ENST00000618856 ELMSAN1Q6PJG2 1045 aa8.89□□□□□ -0.99
NEK3-209ENST00000618856 TMC5Q6UXY8 1006 aa8.89□□□□□ -0.99
NEK3-209ENST00000618856 DSTYKQ6XUX3 929 aa8.89□□□□□ -0.99
NEK3-209ENST00000618856 SPATA31D4Q6ZUB0 917 aa8.89□□□□□ -0.99
NEK3-209ENST00000618856 GJD3Q8N144 294 aa8.89□□□□□ -0.99
NEK3-209ENST00000618856 CSGALNACT2Q8N6G5 542 aa8.89□□□□□ -0.99
NEK3-209ENST00000618856 TOP6BLQ8N6T0 577 aa8.89□□□□□ -0.99
NEK3-209ENST00000618856 TRIML1Q8N9V2 468 aa8.89□□□□□ -0.99
NEK3-209ENST00000618856 RDH13Q8NBN7 331 aa8.89□□□□□ -0.99
NEK3-209ENST00000618856 OR10T2Q8NGX3 314 aa8.89□□□□□ -0.99
NEK3-209ENST00000618856 DHTKD1Q96HY7 919 aaPredicted RBP8.89□□□□□ -0.99
NEK3-209ENST00000618856 ANKRD36BP1Q96IX9 119 aa8.89□□□□□ -0.99
NEK3-209ENST00000618856 RIPOR3Q96MK2 946 aa8.89□□□□□ -0.99
NEK3-209ENST00000618856 PKMYT1Q99640 499 aa8.89□□□□□ -0.99
NEK3-209ENST00000618856 ZCWPW1Q9H0M4 648 aa8.89□□□□□ -0.99
NEK3-209ENST00000618856 POMKQ9H5K3 350 aa8.89□□□□□ -0.99
NEK3-209ENST00000618856 WDR6Q9NNW5 1121 aaKnown RBP8.89□□□□□ -0.99
NEK3-209ENST00000618856 AVENQ9NQS1 362 aaPredicted RBP8.89□□□□□ -0.99
NEK3-209ENST00000618856 L1RE1Q9UN81 338 aa8.89□□□□□ -0.99
NEK3-209ENST00000618856 MAPK8IP1Q9UQF2 711 aa8.89□□□□□ -0.99
NEK3-209ENST00000618856 TIMM13Q9Y5L4 95 aaPredicted RBP8.89□□□□□ -0.99
NEK3-209ENST00000618856 C2orf16Q68DN1 1984 aa8.89□□□□□ -0.99
NEK3-209ENST00000618856 SEC24AO95486 1093 aa8.88□□□□□ -0.99
NEK3-209ENST00000618856 VNN1O95497 513 aa8.88□□□□□ -0.99
NEK3-209ENST00000618856 TNNC2P02585 160 aa8.88□□□□□ -0.99
NEK3-209ENST00000618856 C8AP07357 584 aa8.88□□□□□ -0.99
NEK3-209ENST00000618856 TMEM191BP0C7N4 346 aa8.88□□□□□ -0.99
NEK3-209ENST00000618856 RPL13P26373 211 aaKnown RBP8.88□□□□□ -0.99
NEK3-209ENST00000618856 ATICP31939 592 aa8.88□□□□□ -0.99
NEK3-209ENST00000618856 PMS1P54277 932 aaKnown RBP8.88□□□□□ -0.99
NEK3-209ENST00000618856 LRRC63Q05C16 580 aa8.88□□□□□ -0.99
NEK3-209ENST00000618856 SMARCB1Q12824 385 aa8.88□□□□□ -0.99
NEK3-209ENST00000618856 ADAM9Q13443 819 aa8.88□□□□□ -0.99
NEK3-209ENST00000618856 SOWAHAQ2M3V2 549 aa8.88□□□□□ -0.99
NEK3-209ENST00000618856 TDRD10Q5VZ19 366 aaKnown RBP8.88□□□□□ -0.99
NEK3-209ENST00000618856 LMBRD2Q68DH5 695 aaPredicted RBP8.88□□□□□ -0.99
NEK3-209ENST00000618856 ANKRD40Q6AI12 368 aa8.88□□□□□ -0.99
NEK3-209ENST00000618856 RNF19BQ6ZMZ0 732 aa8.88□□□□□ -0.99
NEK3-209ENST00000618856 INTS8Q75QN2 995 aaKnown RBP8.88□□□□□ -0.99
NEK3-209ENST00000618856 GLYCTKQ8IVS8 523 aa8.88□□□□□ -0.99
NEK3-209ENST00000618856 ZDHHC14Q8IZN3 488 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms