RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 KRT71Q3SY84 523 aa13.18□□□□□ -0.3
CIITA-212ENST00000618207 LDLRAD1Q5T700 205 aa13.18□□□□□ -0.3
CIITA-212ENST00000618207 DCUN1D2Q6PH85 259 aa13.18□□□□□ -0.3
CIITA-212ENST00000618207 MREGQ8N565 214 aa13.18□□□□□ -0.3
CIITA-212ENST00000618207 BRI3BPQ8WY22 251 aa13.18□□□□□ -0.3
CIITA-212ENST00000618207 LENG1Q96BZ8 264 aaPredicted RBP13.18□□□□□ -0.3
CIITA-212ENST00000618207 HAUS1Q96CS2 278 aa13.18□□□□□ -0.3
CIITA-212ENST00000618207 FAM81BQ96LP2 452 aa13.18□□□□□ -0.3
CIITA-212ENST00000618207 MAF1Q9H063 256 aa13.18□□□□□ -0.3
CIITA-212ENST00000618207 FZD8Q9H461 694 aa13.18□□□□□ -0.3
CIITA-212ENST00000618207 ASIC3Q9UHC3 531 aa13.18□□□□□ -0.3
CIITA-212ENST00000618207 TRIP11Q15643 1979 aa13.18□□□□□ -0.3
CIITA-212ENST00000618207 LRRC37A2A6NM11 1700 aa13.18□□□□□ -0.3
CIITA-212ENST00000618207 DCDC2CA8MYV0 355 aa13.18□□□□□ -0.3
CIITA-212ENST00000618207 H3BRB1 525 aa13.18□□□□□ -0.3
CIITA-212ENST00000618207 MYZAPP0CAP1 466 aa13.18□□□□□ -0.3
CIITA-212ENST00000618207 STAG3L1P0CL83 205 aa13.18□□□□□ -0.3
CIITA-212ENST00000618207 ATF7P17544 494 aaPredicted RBP13.18□□□□□ -0.3
CIITA-212ENST00000618207 CTNNA2P26232 953 aa13.18□□□□□ -0.3
CIITA-212ENST00000618207 CCNA1P78396 465 aa13.18□□□□□ -0.3
CIITA-212ENST00000618207 ZNF844Q08AG5 666 aa13.18□□□□□ -0.3
CIITA-212ENST00000618207 DHX34Q14147 1143 aaKnown RBP13.18□□□□□ -0.3
CIITA-212ENST00000618207 SIX1Q15475 284 aaPredicted RBP13.18□□□□□ -0.3
CIITA-212ENST00000618207 JADE1Q6IE81 842 aa13.18□□□□□ -0.3
CIITA-212ENST00000618207 ANKS1BQ7Z6G8 1248 aa13.18□□□□□ -0.3
CIITA-212ENST00000618207 L3MBTL3Q96JM7 780 aaPredicted RBP13.18□□□□□ -0.3
CIITA-212ENST00000618207 FAM107BQ9H098 131 aa13.18□□□□□ -0.3
CIITA-212ENST00000618207 TUT1Q9H6E5 874 aaKnown RBP13.18□□□□□ -0.3
CIITA-212ENST00000618207 HMGXB4Q9UGU5 601 aa13.18□□□□□ -0.3
CIITA-212ENST00000618207 LOC102724159A0A0B4J2E5 919 aa13.17□□□□□ -0.3
CIITA-212ENST00000618207 F8VP50 259 aa13.17□□□□□ -0.3
CIITA-212ENST00000618207 GH1P01241 217 aa13.17□□□□□ -0.3
CIITA-212ENST00000618207 NR1D1P20393 614 aa13.17□□□□□ -0.3
CIITA-212ENST00000618207 IRAK1P51617 712 aa13.17□□□□□ -0.3
CIITA-212ENST00000618207 KRT17Q04695 432 aa13.17□□□□□ -0.3
CIITA-212ENST00000618207 TCEAL1Q15170 157 aa13.17□□□□□ -0.3
CIITA-212ENST00000618207 PWP2Q15269 919 aaKnown RBP13.17□□□□□ -0.3
CIITA-212ENST00000618207 KIZQ2M2Z5 673 aa13.17□□□□□ -0.3
CIITA-212ENST00000618207 TSHZ1Q6ZSZ6 1077 aa13.17□□□□□ -0.3
CIITA-212ENST00000618207 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.17□□□□□ -0.3
CIITA-212ENST00000618207 PROSCO94903 275 aa13.17□□□□□ -0.3
CIITA-212ENST00000618207 ARF4P18085 180 aaPredicted RBP13.17□□□□□ -0.3
CIITA-212ENST00000618207 SLCO1A2P46721 670 aa13.17□□□□□ -0.3
CIITA-212ENST00000618207 FAM182AQ5T1J6 154 aa13.17□□□□□ -0.3
CIITA-212ENST00000618207 TXNRD3NBQ6F5E7 133 aa13.17□□□□□ -0.3
CIITA-212ENST00000618207 ZDHHC24Q6UX98 284 aa13.17□□□□□ -0.3
CIITA-212ENST00000618207 C1orf127Q8N9H9 656 aa13.17□□□□□ -0.3
CIITA-212ENST00000618207 MORC4Q8TE76 937 aa13.17□□□□□ -0.3
CIITA-212ENST00000618207 MS4A4AQ96JQ5 239 aa13.17□□□□□ -0.3
CIITA-212ENST00000618207 ATP6V1G3Q96LB4 118 aa13.17□□□□□ -0.3
CIITA-212ENST00000618207 PWWP2AQ96N64 755 aa13.17□□□□□ -0.3
CIITA-212ENST00000618207 JPH2Q9BR39 696 aaPredicted RBP13.17□□□□□ -0.3
CIITA-212ENST00000618207 PLVAPQ9BX97 442 aa13.17□□□□□ -0.3
CIITA-212ENST00000618207 SEMA4AQ9H3S1 761 aa13.17□□□□□ -0.3
CIITA-212ENST00000618207 SMYD3Q9H7B4 428 aa13.17□□□□□ -0.3
CIITA-212ENST00000618207 PTPRHQ9HD43 1115 aa13.17□□□□□ -0.3
CIITA-212ENST00000618207 SETD4Q9NVD3 440 aa13.17□□□□□ -0.3
CIITA-212ENST00000618207 GRHL1Q9NZI5 618 aa13.17□□□□□ -0.3
CIITA-212ENST00000618207 NOVA2Q9UNW9 492 aaKnown RBP13.17□□□□□ -0.3
CIITA-212ENST00000618207 SIP14410 1827 aa13.17□□□□□ -0.3
CIITA-212ENST00000618207 FAM187AA6NFU0 413 aa13.17□□□□□ -0.3
CIITA-212ENST00000618207 GAS2O43903 313 aaKnown RBP13.17□□□□□ -0.3
CIITA-212ENST00000618207 ERLIN2O94905 339 aa13.17□□□□□ -0.3
CIITA-212ENST00000618207 ECEL1O95672 775 aa13.17□□□□□ -0.3
CIITA-212ENST00000618207 SNAI1O95863 264 aaPredicted RBP13.17□□□□□ -0.3
CIITA-212ENST00000618207 PHKA2P46019 1235 aa13.17□□□□□ -0.3
CIITA-212ENST00000618207 ADCY2Q08462 1091 aa13.17□□□□□ -0.3
CIITA-212ENST00000618207 LAMC2Q13753 1193 aa13.17□□□□□ -0.3
CIITA-212ENST00000618207 ZNF792Q3KQV3 632 aa13.17□□□□□ -0.3
CIITA-212ENST00000618207 MAMDC4Q6UXC1 1216 aa13.17□□□□□ -0.3
CIITA-212ENST00000618207 GPR142Q7Z601 462 aa13.17□□□□□ -0.3
CIITA-212ENST00000618207 KIAA0319LQ8IZA0 1049 aa13.17□□□□□ -0.3
CIITA-212ENST00000618207 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.17□□□□□ -0.3
CIITA-212ENST00000618207 FEZF2Q8TBJ5 459 aa13.17□□□□□ -0.3
CIITA-212ENST00000618207 TRIM11Q96F44 468 aa13.17□□□□□ -0.3
CIITA-212ENST00000618207 DDX27Q96GQ7 796 aaKnown RBP13.17□□□□□ -0.3
CIITA-212ENST00000618207 XYLT2Q9H1B5 865 aa13.17□□□□□ -0.3
CIITA-212ENST00000618207 CXCL16Q9H2A7 254 aa13.17□□□□□ -0.3
CIITA-212ENST00000618207 MRPL47Q9HD33 250 aaKnown RBP13.17□□□□□ -0.3
CIITA-212ENST00000618207 AVENQ9NQS1 362 aaPredicted RBP13.17□□□□□ -0.3
CIITA-212ENST00000618207 ZDHHC18Q9NUE0 388 aa13.17□□□□□ -0.3
CIITA-212ENST00000618207 SIX4Q9UIU6 781 aa13.17□□□□□ -0.3
CIITA-212ENST00000618207 H0YGN5 161 aa13.16□□□□□ -0.3
CIITA-212ENST00000618207 ASPAP45381 313 aa13.16□□□□□ -0.3
CIITA-212ENST00000618207 PTP4A2Q12974 167 aa13.16□□□□□ -0.3
CIITA-212ENST00000618207 PPP2R5EQ16537 467 aa13.16□□□□□ -0.3
CIITA-212ENST00000618207 SMTNL2Q2TAL5 461 aa13.16□□□□□ -0.3
CIITA-212ENST00000618207 ZNF667Q5HYK9 610 aa13.16□□□□□ -0.3
CIITA-212ENST00000618207 DENND1BQ6P3S1 775 aa13.16□□□□□ -0.3
CIITA-212ENST00000618207 DNAJC24Q6P3W2 148 aa13.16□□□□□ -0.3
CIITA-212ENST00000618207 ERICH1Q86X53 443 aa13.16□□□□□ -0.3
CIITA-212ENST00000618207 EMC1Q8N766 993 aa13.16□□□□□ -0.3
CIITA-212ENST00000618207 BCAS4Q8TDM0 211 aa13.16□□□□□ -0.3
CIITA-212ENST00000618207 SEC14L1Q92503 715 aa13.16□□□□□ -0.3
CIITA-212ENST00000618207 TWNKQ96RR1 684 aa13.16□□□□□ -0.3
CIITA-212ENST00000618207 HES2Q9Y543 173 aa13.16□□□□□ -0.3
CIITA-212ENST00000618207 NFS1Q9Y697 457 aa13.16□□□□□ -0.3
CIITA-212ENST00000618207 PLXNA1Q9UIW2 1896 aa13.16□□□□□ -0.3
CIITA-212ENST00000618207 MEFVO15553 781 aaPredicted RBP13.16□□□□□ -0.3
CIITA-212ENST00000618207 ADCY6O43306 1168 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms