RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 MFSD10Q14728 455 aa18.66■□□□□ 0.58
CNOT3-209ENST00000617930 FSCN1Q16658 493 aaKnown RBP18.66■□□□□ 0.58
CNOT3-209ENST00000617930 C1orf127Q8N9H9 656 aa18.66■□□□□ 0.58
CNOT3-209ENST00000617930 TSEN2Q8NCE0 465 aaKnown RBP18.66■□□□□ 0.58
CNOT3-209ENST00000617930 ZNF606Q8WXB4 792 aa18.66■□□□□ 0.58
CNOT3-209ENST00000617930 CDHR5Q9HBB8 845 aa18.66■□□□□ 0.58
CNOT3-209ENST00000617930 CISHQ9NSE2 258 aa18.66■□□□□ 0.58
CNOT3-209ENST00000617930 UVRAGQ9P2Y5 699 aa18.66■□□□□ 0.58
CNOT3-209ENST00000617930 AMACRQ9UHK6 382 aa18.66■□□□□ 0.58
CNOT3-209ENST00000617930 NFU1Q9UMS0 254 aa18.66■□□□□ 0.58
CNOT3-209ENST00000617930 POLIQ9UNA4 740 aa18.66■□□□□ 0.58
CNOT3-209ENST00000617930 Q9Y3F1 56 aa18.66■□□□□ 0.58
CNOT3-209ENST00000617930 TSPAN1O60635 241 aa18.66■□□□□ 0.58
CNOT3-209ENST00000617930 DUSP11O75319 330 aaKnown RBP18.66■□□□□ 0.58
CNOT3-209ENST00000617930 MAP2K2P36507 400 aa18.66■□□□□ 0.58
CNOT3-209ENST00000617930 PSEN2P49810 448 aa18.66■□□□□ 0.58
CNOT3-209ENST00000617930 TNNC1P63316 161 aa18.66■□□□□ 0.58
CNOT3-209ENST00000617930 SGSM1Q2NKQ1 1148 aa18.66■□□□□ 0.58
CNOT3-209ENST00000617930 SLC10A6Q3KNW5 377 aa18.66■□□□□ 0.58
CNOT3-209ENST00000617930 ZNF394Q53GI3 561 aa18.66■□□□□ 0.58
CNOT3-209ENST00000617930 DAB2IPQ5VWQ8 1189 aa18.66■□□□□ 0.58
CNOT3-209ENST00000617930 FAM76AQ8TAV0 307 aa18.66■□□□□ 0.58
CNOT3-209ENST00000617930 TFAP2BQ92481 460 aa18.66■□□□□ 0.58
CNOT3-209ENST00000617930 CELF4Q9BZC1 486 aaKnown RBP18.66■□□□□ 0.58
CNOT3-209ENST00000617930 SRRDQ9UH36 339 aa18.66■□□□□ 0.58
CNOT3-209ENST00000617930 SCN10AQ9Y5Y9 1956 aa18.65■□□□□ 0.58
CNOT3-209ENST00000617930 TCRBV7S2A1N4TA0A589 114 aa18.65■□□□□ 0.58
CNOT3-209ENST00000617930 TMEM62Q0P6H9 643 aa18.65■□□□□ 0.58
CNOT3-209ENST00000617930 TMEM132AQ24JP5 1023 aa18.65■□□□□ 0.58
CNOT3-209ENST00000617930 MFSD14CQ5VZR4 134 aa18.65■□□□□ 0.58
CNOT3-209ENST00000617930 DDX42Q86XP3 938 aaKnown RBP eCLIP18.65■□□□□ 0.58
CNOT3-209ENST00000617930 REM2Q8IYK8 340 aaPredicted RBP18.65■□□□□ 0.58
CNOT3-209ENST00000617930 IFT81Q8WYA0 676 aa18.65■□□□□ 0.58
CNOT3-209ENST00000617930 NIF3L1Q9GZT8 377 aa18.65■□□□□ 0.58
CNOT3-209ENST00000617930 ANK1P16157 1881 aa18.65■□□□□ 0.58
CNOT3-209ENST00000617930 GOLGA6CA6NDK9 693 aa18.64■□□□□ 0.58
CNOT3-209ENST00000617930 THAP12O43422 761 aa18.64■□□□□ 0.58
CNOT3-209ENST00000617930 GJB6O95452 261 aa18.64■□□□□ 0.58
CNOT3-209ENST00000617930 C6orf222P0C671 652 aaPredicted RBP18.64■□□□□ 0.58
CNOT3-209ENST00000617930 GOLGA6DP0CG33 693 aa18.64■□□□□ 0.58
CNOT3-209ENST00000617930 PRKAR2AP13861 404 aaKnown RBP18.64■□□□□ 0.58
CNOT3-209ENST00000617930 CTNNA1P35221 906 aaKnown RBP18.64■□□□□ 0.58
CNOT3-209ENST00000617930 GJA9P57773 515 aa18.64■□□□□ 0.58
CNOT3-209ENST00000617930 SURF1Q15526 300 aa18.64■□□□□ 0.58
CNOT3-209ENST00000617930 JADE1Q6IE81 842 aa18.64■□□□□ 0.58
CNOT3-209ENST00000617930 LRRC31Q6UY01 552 aa18.64■□□□□ 0.58
CNOT3-209ENST00000617930 SCARA5Q6ZMJ2 495 aa18.64■□□□□ 0.58
CNOT3-209ENST00000617930 SRLQ86TD4 932 aa18.64■□□□□ 0.58
CNOT3-209ENST00000617930 WDTC1Q8N5D0 677 aa18.64■□□□□ 0.58
CNOT3-209ENST00000617930 NLRP7Q8WX94 980 aa18.64■□□□□ 0.58
CNOT3-209ENST00000617930 RUFY1Q96T51 708 aa18.64■□□□□ 0.58
CNOT3-209ENST00000617930 C11orf70Q9BRQ4 267 aa18.64■□□□□ 0.58
CNOT3-209ENST00000617930 AP5M1Q9H0R1 490 aa18.64■□□□□ 0.58
CNOT3-209ENST00000617930 SDCBP2Q9H190 292 aa18.64■□□□□ 0.58
CNOT3-209ENST00000617930 ADAMTS10Q9H324 1103 aa18.64■□□□□ 0.58
CNOT3-209ENST00000617930 RPF1Q9H9Y2 349 aaKnown RBP18.64■□□□□ 0.58
CNOT3-209ENST00000617930 AVENQ9NQS1 362 aaPredicted RBP18.64■□□□□ 0.58
CNOT3-209ENST00000617930 GOLGA6AQ9NYA3 693 aa18.64■□□□□ 0.58
CNOT3-209ENST00000617930 RRP15Q9Y3B9 282 aaKnown RBP18.64■□□□□ 0.58
CNOT3-209ENST00000617930 MBLAC1A4D2B0 266 aaPredicted RBP18.64■□□□□ 0.57
CNOT3-209ENST00000617930 MIF4GDA9UHW6 222 aaKnown RBP18.64■□□□□ 0.57
CNOT3-209ENST00000617930 ADAMTS4O75173 837 aa18.64■□□□□ 0.57
CNOT3-209ENST00000617930 CLSTN1O94985 981 aa18.64■□□□□ 0.57
CNOT3-209ENST00000617930 TMEM191BP0C7N4 346 aa18.64■□□□□ 0.57
CNOT3-209ENST00000617930 MCF2P10911 925 aa18.64■□□□□ 0.57
CNOT3-209ENST00000617930 BRD2P25440 801 aaKnown RBP18.64■□□□□ 0.57
CNOT3-209ENST00000617930 RAP1GAPP47736 663 aa18.64■□□□□ 0.57
CNOT3-209ENST00000617930 CPT1AP50416 773 aa18.64■□□□□ 0.57
CNOT3-209ENST00000617930 GUCY2FP51841 1108 aa18.64■□□□□ 0.57
CNOT3-209ENST00000617930 KIZQ2M2Z5 673 aa18.64■□□□□ 0.57
CNOT3-209ENST00000617930 EMBQ6PCB8 327 aa18.64■□□□□ 0.57
CNOT3-209ENST00000617930 IFT20Q8IY31 132 aa18.64■□□□□ 0.57
CNOT3-209ENST00000617930 UPF3AQ9H1J1 476 aaKnown RBP18.64■□□□□ 0.57
CNOT3-209ENST00000617930 NEUROG2Q9H2A3 272 aa18.64■□□□□ 0.57
CNOT3-209ENST00000617930 ANAPC7Q9UJX3 599 aa18.64■□□□□ 0.57
CNOT3-209ENST00000617930 PCDHA3Q9Y5H8 950 aa18.64■□□□□ 0.57
CNOT3-209ENST00000617930 A0A1B0GUA9 196 aa18.63■□□□□ 0.57
CNOT3-209ENST00000617930 CCDC188H7C350 402 aa18.63■□□□□ 0.57
CNOT3-209ENST00000617930 O00370 1275 aa18.63■□□□□ 0.57
CNOT3-209ENST00000617930 TTI1O43156 1089 aa18.63■□□□□ 0.57
CNOT3-209ENST00000617930 SEPT4O43236 478 aa18.63■□□□□ 0.57
CNOT3-209ENST00000617930 TREHO43280 583 aa18.63■□□□□ 0.57
CNOT3-209ENST00000617930 TMOD1P28289 359 aa18.63■□□□□ 0.57
CNOT3-209ENST00000617930 NSFP46459 744 aaKnown RBP18.63■□□□□ 0.57
CNOT3-209ENST00000617930 CDH8P55286 799 aa18.63■□□□□ 0.57
CNOT3-209ENST00000617930 TRPC3Q13507 836 aa18.63■□□□□ 0.57
CNOT3-209ENST00000617930 ZNF699Q32M78 642 aa18.63■□□□□ 0.57
CNOT3-209ENST00000617930 MMS22LQ6ZRQ5 1243 aa18.63■□□□□ 0.57
CNOT3-209ENST00000617930 IMPG2Q9BZV3 1241 aa18.63■□□□□ 0.57
CNOT3-209ENST00000617930 WNT8AQ9H1J5 351 aa18.63■□□□□ 0.57
CNOT3-209ENST00000617930 GOLGA8KD6RF30 607 aa18.62■□□□□ 0.57
CNOT3-209ENST00000617930 GPR32O75388 356 aa18.62■□□□□ 0.57
CNOT3-209ENST00000617930 CTNNA2P26232 953 aa18.62■□□□□ 0.57
CNOT3-209ENST00000617930 HOXA11P31270 313 aaPredicted RBP18.62■□□□□ 0.57
CNOT3-209ENST00000617930 HOXC8P31273 242 aa18.62■□□□□ 0.57
CNOT3-209ENST00000617930 MAMLD1Q13495 774 aa18.62■□□□□ 0.57
CNOT3-209ENST00000617930 PHF13Q86YI8 300 aaPredicted RBP18.62■□□□□ 0.57
CNOT3-209ENST00000617930 CAVIN3Q969G5 261 aa18.62■□□□□ 0.57
CNOT3-209ENST00000617930 FAM49AQ9H0Q0 323 aaPredicted RBP18.62■□□□□ 0.57
CNOT3-209ENST00000617930 NXF1Q9UBU9 619 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms