RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 CCR3P51677 355 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 RAD23BP54727 409 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 MSLNQ13421 630 aaPredicted RBP5.88□□□□□ -1.47
CPNE4-214ENST00000617767 EPC2Q52LR7 807 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 C2CD6Q53TS8 623 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 HAUS6Q7Z4H7 955 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 CBWD2Q8IUF1 395 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 TTC39CQ8N584 583 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 ESX1Q8N693 406 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 AENQ8WTP8 325 aaKnown RBP5.88□□□□□ -1.47
CPNE4-214ENST00000617767 U2AF1L4Q8WU68 220 aaKnown RBP5.88□□□□□ -1.47
CPNE4-214ENST00000617767 BSNDQ8WZ55 320 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 P3H4Q92791 437 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 UPF1Q92900 1129 aaKnown RBP eCLIP5.88□□□□□ -1.47
CPNE4-214ENST00000617767 CATSPER2Q96P56 530 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 PI4K2AQ9BTU6 479 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 PLVAPQ9BX97 442 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 AS3MTQ9HBK9 375 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 TUFT1Q9NNX1 390 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 BTBD7Q9P203 1132 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 ANKFY1Q9P2R3 1169 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 NKX1-2Q9UD57 310 aaPredicted RBP5.88□□□□□ -1.47
CPNE4-214ENST00000617767 AGAP1Q9UPQ3 857 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 NOX1Q9Y5S8 564 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 SAR1BQ9Y6B6 198 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 EMSYQ7Z589 1322 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 PITPNM2Q9BZ72 1349 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 DENND3A2RUS2 1198 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 ANKRD63C9JTQ0 380 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 IGF2BP3O00425 579 aaKnown RBP eCLIP5.88□□□□□ -1.47
CPNE4-214ENST00000617767 GJB1P08034 283 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 GSTA2P09210 222 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 CYP2C8P10632 490 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 COL6A2P12110 1019 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 PORP16435 677 aaPredicted RBP5.88□□□□□ -1.47
CPNE4-214ENST00000617767 PPP1R2P41236 205 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 VAV2P52735 878 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 SH3BGRP55822 239 aaPredicted RBP5.88□□□□□ -1.47
CPNE4-214ENST00000617767 PDE1BQ01064 536 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 LY6KQ17RY6 165 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 PCNX4Q63HM2 1172 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 HGSNATQ68CP4 663 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 IQCEQ6IPM2 695 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 ZNF571Q7Z3V5 609 aaPredicted RBP5.88□□□□□ -1.47
CPNE4-214ENST00000617767 GRAMD2AQ8IUY3 354 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 LRRC49Q8IUZ0 686 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 GLYCTKQ8IVS8 523 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 TMEM130Q8N3G9 435 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.88□□□□□ -1.47
CPNE4-214ENST00000617767 DNAJC1Q96KC8 554 aaKnown RBP5.88□□□□□ -1.47
CPNE4-214ENST00000617767 TEX13BQ9BXU2 312 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 NRDE2Q9H7Z3 1164 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 ZNF304Q9HCX3 659 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.88□□□□□ -1.47
CPNE4-214ENST00000617767 CYP39A1Q9NYL5 469 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 MOSPD1Q9UJG1 213 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 KIAA1257Q9ULG3 409 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 PDXKO00764 312 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 HNRNPDLO14979 420 aaKnown RBP5.88□□□□□ -1.47
CPNE4-214ENST00000617767 ATMINO43313 823 aaPredicted RBP5.88□□□□□ -1.47
CPNE4-214ENST00000617767 PALMO75781 387 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 CYP1A1P04798 512 aaPredicted RBP5.88□□□□□ -1.47
CPNE4-214ENST00000617767 DDX5P17844 614 aaKnown RBP5.88□□□□□ -1.47
CPNE4-214ENST00000617767 TMOD1P28289 359 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 MZF1P28698 734 aaPredicted RBP5.88□□□□□ -1.47
CPNE4-214ENST00000617767 CCND2P30279 289 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 DSG3P32926 999 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 PSMC2P35998 433 aaKnown RBP5.88□□□□□ -1.47
CPNE4-214ENST00000617767 OSTNP61366 133 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 ATP11AP98196 1134 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 MAPK7Q13164 816 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 GRM1Q13255 1194 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 MEA1Q16626 185 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 CCDC153Q494R4 210 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 MAP1SQ66K74 1059 aaPredicted RBP5.88□□□□□ -1.47
CPNE4-214ENST00000617767 ZCCHC8Q6NZY4 707 aaKnown RBP5.88□□□□□ -1.47
CPNE4-214ENST00000617767 LLGL2Q6P1M3 1020 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 EPM2AIP1Q7L775 607 aaPredicted RBP5.88□□□□□ -1.47
CPNE4-214ENST00000617767 APOBEC3FQ8IUX4 373 aaKnown RBP5.88□□□□□ -1.47
CPNE4-214ENST00000617767 GPC2Q8N158 579 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 PPM1KQ8N3J5 372 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 FBF1Q8TES7 1133 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 TRAPPC12Q8WVT3 735 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 USP6NLQ92738 828 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 COPS5Q92905 334 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 FIZ1Q96SL8 496 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 SPON1Q9HCB6 807 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 UBE2TQ9NPD8 197 aaPredicted RBP5.88□□□□□ -1.47
CPNE4-214ENST00000617767 CEP72Q9P209 647 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 LARSQ9P2J5 1176 aaKnown RBP5.88□□□□□ -1.47
CPNE4-214ENST00000617767 MTUS1Q9ULD2 1270 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 TRIM33Q9UPN9 1127 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 ARIH1Q9Y4X5 557 aaPredicted RBP5.88□□□□□ -1.47
CPNE4-214ENST00000617767 SLC4A7Q9Y6M7 1214 aa5.88□□□□□ -1.47
CPNE4-214ENST00000617767 BRCA1P38398 1863 aaKnown RBP5.88□□□□□ -1.47
CPNE4-214ENST00000617767 WDR81Q562E7 1941 aa5.87□□□□□ -1.47
CPNE4-214ENST00000617767 ESYT3A0FGR9 886 aa5.87□□□□□ -1.47
CPNE4-214ENST00000617767 LRRIQ4A6NIV6 560 aa5.87□□□□□ -1.47
CPNE4-214ENST00000617767 WDR64B1ANS9 1081 aa5.87□□□□□ -1.47
CPNE4-214ENST00000617767 KRT16P08779 473 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms