RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 TAF4BQ92750 862 aa21.99■■□□□ 1.11
CNTNAP3B-212ENST00000617422 C18orf25Q96B23 403 aaPredicted RBP21.99■■□□□ 1.11
CNTNAP3B-212ENST00000617422 ZNF653Q96CK0 615 aa21.99■■□□□ 1.11
CNTNAP3B-212ENST00000617422 ACBD3Q9H3P7 528 aa21.99■■□□□ 1.11
CNTNAP3B-212ENST00000617422 TUBGCP4Q9UGJ1 667 aa21.99■■□□□ 1.11
CNTNAP3B-212ENST00000617422 HMGXB4Q9UGU5 601 aa21.99■■□□□ 1.11
CNTNAP3B-212ENST00000617422 BRD2P25440 801 aaKnown RBP21.99■■□□□ 1.11
CNTNAP3B-212ENST00000617422 CST5P28325 142 aaPredicted RBP21.99■■□□□ 1.11
CNTNAP3B-212ENST00000617422 AXLP30530 894 aa21.99■■□□□ 1.11
CNTNAP3B-212ENST00000617422 MAP2K2P36507 400 aa21.99■■□□□ 1.11
CNTNAP3B-212ENST00000617422 NOMO3P69849 1222 aa21.99■■□□□ 1.11
CNTNAP3B-212ENST00000617422 CENPCQ03188 943 aa21.99■■□□□ 1.11
CNTNAP3B-212ENST00000617422 ZBTB6Q15916 424 aa21.99■■□□□ 1.11
CNTNAP3B-212ENST00000617422 PEX26Q7Z412 305 aa21.99■■□□□ 1.11
CNTNAP3B-212ENST00000617422 PHLDB2Q86SQ0 1253 aa21.99■■□□□ 1.11
CNTNAP3B-212ENST00000617422 RHOT2Q8IXI1 618 aa21.99■■□□□ 1.11
CNTNAP3B-212ENST00000617422 CAGE1Q8TC20 777 aa21.99■■□□□ 1.11
CNTNAP3B-212ENST00000617422 BTBD6Q96KE9 485 aa21.99■■□□□ 1.11
CNTNAP3B-212ENST00000617422 C2orf54Q08AI8 447 aa21.98■■□□□ 1.11
CNTNAP3B-212ENST00000617422 ORC1Q13415 861 aa21.98■■□□□ 1.11
CNTNAP3B-212ENST00000617422 RPS6KA1Q15418 735 aa21.98■■□□□ 1.11
CNTNAP3B-212ENST00000617422 WDR93Q6P2C0 686 aa21.98■■□□□ 1.11
CNTNAP3B-212ENST00000617422 ZNF572Q7Z3I7 529 aaPredicted RBP21.98■■□□□ 1.11
CNTNAP3B-212ENST00000617422 MCOLN2Q8IZK6 566 aa21.98■■□□□ 1.11
CNTNAP3B-212ENST00000617422 ARRDC4Q8NCT1 418 aa21.98■■□□□ 1.11
CNTNAP3B-212ENST00000617422 SMG8Q8ND04 991 aaKnown RBP21.98■■□□□ 1.11
CNTNAP3B-212ENST00000617422 WHAMMQ8TF30 809 aa21.98■■□□□ 1.11
CNTNAP3B-212ENST00000617422 HPDLQ96IR7 371 aa21.98■■□□□ 1.11
CNTNAP3B-212ENST00000617422 TWNKQ96RR1 684 aa21.98■■□□□ 1.11
CNTNAP3B-212ENST00000617422 VRTNQ9H8Y1 702 aa21.98■■□□□ 1.11
CNTNAP3B-212ENST00000617422 KLK14Q9P0G3 267 aa21.98■■□□□ 1.11
CNTNAP3B-212ENST00000617422 DDX20Q9UHI6 824 aaKnown RBP21.98■■□□□ 1.11
CNTNAP3B-212ENST00000617422 GTF3C4Q9UKN8 822 aa21.98■■□□□ 1.11
CNTNAP3B-212ENST00000617422 MCM3P25205 808 aa21.98■■□□□ 1.11
CNTNAP3B-212ENST00000617422 HES6Q96HZ4 224 aa21.98■■□□□ 1.11
CNTNAP3B-212ENST00000617422 NUP85Q9BW27 656 aa21.98■■□□□ 1.11
CNTNAP3B-212ENST00000617422 TRIM6Q9C030 488 aaPredicted RBP21.98■■□□□ 1.11
CNTNAP3B-212ENST00000617422 PLEKHA5Q9HAU0 1116 aa21.98■■□□□ 1.11
CNTNAP3B-212ENST00000617422 ITGA11Q9UKX5 1188 aa21.98■■□□□ 1.11
CNTNAP3B-212ENST00000617422 KCNK3O14649 394 aa21.97■■□□□ 1.11
CNTNAP3B-212ENST00000617422 MTA2O94776 668 aa21.97■■□□□ 1.11
CNTNAP3B-212ENST00000617422 RHOXF2BP0C7M4 288 aa21.97■■□□□ 1.11
CNTNAP3B-212ENST00000617422 CKAP4Q07065 602 aaKnown RBP21.97■■□□□ 1.11
CNTNAP3B-212ENST00000617422 MON1BQ7L1V2 547 aa21.97■■□□□ 1.11
CNTNAP3B-212ENST00000617422 RAET1EQ8TD07 263 aa21.97■■□□□ 1.11
CNTNAP3B-212ENST00000617422 RHOXF2Q9BQY4 288 aa21.97■■□□□ 1.11
CNTNAP3B-212ENST00000617422 SENP6Q9GZR1 1112 aaPredicted RBP21.97■■□□□ 1.11
CNTNAP3B-212ENST00000617422 RNF216Q9NWF9 866 aaPredicted RBP21.97■■□□□ 1.11
CNTNAP3B-212ENST00000617422 CNTN3Q9P232 1028 aa21.97■■□□□ 1.11
CNTNAP3B-212ENST00000617422 CNOT8Q9UFF9 292 aaKnown RBP21.97■■□□□ 1.11
CNTNAP3B-212ENST00000617422 TULP2O00295 520 aa21.97■■□□□ 1.11
CNTNAP3B-212ENST00000617422 RRM1P23921 792 aa21.97■■□□□ 1.11
CNTNAP3B-212ENST00000617422 VSNL1P62760 191 aa21.97■■□□□ 1.11
CNTNAP3B-212ENST00000617422 SESTD1Q86VW0 696 aa21.97■■□□□ 1.11
CNTNAP3B-212ENST00000617422 NT5DC4Q86YG4 428 aa21.97■■□□□ 1.11
CNTNAP3B-212ENST00000617422 CD302Q8IX05 232 aa21.97■■□□□ 1.11
CNTNAP3B-212ENST00000617422 TRIM7Q9C029 511 aa21.97■■□□□ 1.11
CNTNAP3B-212ENST00000617422 CWC15Q9P013 229 aaKnown RBP21.97■■□□□ 1.11
CNTNAP3B-212ENST00000617422 IPPQ9Y573 584 aa21.97■■□□□ 1.11
CNTNAP3B-212ENST00000617422 TRPV2Q9Y5S1 764 aa21.97■■□□□ 1.11
CNTNAP3B-212ENST00000617422 HOXD10P28358 340 aa21.96■■□□□ 1.11
CNTNAP3B-212ENST00000617422 ATICP31939 592 aa21.96■■□□□ 1.11
CNTNAP3B-212ENST00000617422 RAD23BP54727 409 aa21.96■■□□□ 1.11
CNTNAP3B-212ENST00000617422 RNASE9P60153 205 aaKnown RBP21.96■■□□□ 1.11
CNTNAP3B-212ENST00000617422 MGAT3Q09327 533 aa21.96■■□□□ 1.11
CNTNAP3B-212ENST00000617422 PTP4A2Q12974 167 aa21.96■■□□□ 1.11
CNTNAP3B-212ENST00000617422 SYCE1Q8N0S2 351 aa21.96■■□□□ 1.11
CNTNAP3B-212ENST00000617422 ZNF564Q8TBZ8 553 aaPredicted RBP21.96■■□□□ 1.11
CNTNAP3B-212ENST00000617422 RPGRIP1Q96KN7 1286 aa21.96■■□□□ 1.11
CNTNAP3B-212ENST00000617422 TSPYL1Q9H0U9 437 aa21.96■■□□□ 1.11
CNTNAP3B-212ENST00000617422 ALG6Q9Y672 507 aa21.96■■□□□ 1.11
CNTNAP3B-212ENST00000617422 DDX3YO15523 660 aaKnown RBP21.95■■□□□ 1.1
CNTNAP3B-212ENST00000617422 RBP5P82980 135 aa21.95■■□□□ 1.1
CNTNAP3B-212ENST00000617422 DCAF12L1Q5VU92 463 aa21.95■■□□□ 1.1
CNTNAP3B-212ENST00000617422 APBB1IPQ7Z5R6 666 aaPredicted RBP21.95■■□□□ 1.1
CNTNAP3B-212ENST00000617422 WDTC1Q8N5D0 677 aa21.95■■□□□ 1.1
CNTNAP3B-212ENST00000617422 SPATA4Q8NEY3 305 aa21.95■■□□□ 1.1
CNTNAP3B-212ENST00000617422 ZNF296Q8WUU4 475 aaPredicted RBP21.95■■□□□ 1.1
CNTNAP3B-212ENST00000617422 ELOVL4Q9GZR5 314 aa21.95■■□□□ 1.1
CNTNAP3B-212ENST00000617422 ST3GAL5Q9UNP4 418 aa21.95■■□□□ 1.1
CNTNAP3B-212ENST00000617422 MEIS3P2A8K0S8 358 aa21.95■■□□□ 1.1
CNTNAP3B-212ENST00000617422 TMEM110-MUSTN1A8MSY1 372 aa21.95■■□□□ 1.1
CNTNAP3B-212ENST00000617422 NSFP46459 744 aaKnown RBP21.95■■□□□ 1.1
CNTNAP3B-212ENST00000617422 YARSP54577 528 aaKnown RBP21.95■■□□□ 1.1
CNTNAP3B-212ENST00000617422 CASP8Q14790 479 aa21.95■■□□□ 1.1
CNTNAP3B-212ENST00000617422 PTGISQ16647 500 aa21.95■■□□□ 1.1
CNTNAP3B-212ENST00000617422 ZSCAN26Q16670 478 aa21.95■■□□□ 1.1
CNTNAP3B-212ENST00000617422 PXYLP1Q8TE99 480 aa21.95■■□□□ 1.1
CNTNAP3B-212ENST00000617422 C11orf70Q9BRQ4 267 aa21.95■■□□□ 1.1
CNTNAP3B-212ENST00000617422 AGO3Q9H9G7 860 aaKnown RBP21.95■■□□□ 1.1
CNTNAP3B-212ENST00000617422 TRMT13Q9NUP7 481 aaKnown RBP21.95■■□□□ 1.1
CNTNAP3B-212ENST00000617422 AMFRQ9UKV5 643 aa21.95■■□□□ 1.1
CNTNAP3B-212ENST00000617422 DERAQ9Y315 318 aa21.95■■□□□ 1.1
CNTNAP3B-212ENST00000617422 SMIM28A0A1B0GU29 152 aa21.94■■□□□ 1.1
CNTNAP3B-212ENST00000617422 MESDQ14696 234 aa21.94■■□□□ 1.1
CNTNAP3B-212ENST00000617422 HSP90B2PQ58FF3 399 aa21.94■■□□□ 1.1
CNTNAP3B-212ENST00000617422 SLC4A11Q8NBS3 891 aa21.94■■□□□ 1.1
CNTNAP3B-212ENST00000617422 FAM71BQ8TC56 605 aa21.94■■□□□ 1.1
CNTNAP3B-212ENST00000617422 CILPO75339 1184 aa21.94■■□□□ 1.1
CNTNAP3B-212ENST00000617422 INHAP05111 366 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms