RNA–Protein interactions for RNA: ENST00000616833.5

CLN5-203, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-203ENST00000616833 HMGB1P1B2RPK0 211 aaPredicted RBP23.2■■□□□ 1.3
CLN5-203ENST00000616833 PIK3R2O00459 728 aa23.2■■□□□ 1.3
CLN5-203ENST00000616833 FSCN2O14926 492 aa23.2■■□□□ 1.3
CLN5-203ENST00000616833 MEFVO15553 781 aaPredicted RBP23.2■■□□□ 1.3
CLN5-203ENST00000616833 PPFIA4O75335 1185 aa23.2■■□□□ 1.3
CLN5-203ENST00000616833 RPS6KA5O75582 802 aa23.2■■□□□ 1.3
CLN5-203ENST00000616833 HSPA6P17066 643 aa23.2■■□□□ 1.3
CLN5-203ENST00000616833 ADORA2AP29274 412 aa23.2■■□□□ 1.3
CLN5-203ENST00000616833 TMEM62Q0P6H9 643 aa23.2■■□□□ 1.3
CLN5-203ENST00000616833 MTMR3Q13615 1198 aa23.2■■□□□ 1.3
CLN5-203ENST00000616833 DPY19L2Q6NUT2 758 aa23.2■■□□□ 1.3
CLN5-203ENST00000616833 FASTKD5Q7L8L6 764 aaKnown RBP23.2■■□□□ 1.3
CLN5-203ENST00000616833 WDTC1Q8N5D0 677 aa23.2■■□□□ 1.3
CLN5-203ENST00000616833 MDM1Q8TC05 714 aa23.2■■□□□ 1.3
CLN5-203ENST00000616833 NIF3L1Q9GZT8 377 aa23.2■■□□□ 1.3
CLN5-203ENST00000616833 ACKR2O00590 384 aa23.2■■□□□ 1.3
CLN5-203ENST00000616833 CHKAP35790 457 aa23.2■■□□□ 1.3
CLN5-203ENST00000616833 ARHGAP1Q07960 439 aa23.2■■□□□ 1.3
CLN5-203ENST00000616833 PPP2R5EQ16537 467 aa23.2■■□□□ 1.3
CLN5-203ENST00000616833 WDR72Q3MJ13 1102 aa23.2■■□□□ 1.3
CLN5-203ENST00000616833 FAM81BQ96LP2 452 aa23.2■■□□□ 1.3
CLN5-203ENST00000616833 DDX23Q9BUQ8 820 aaKnown RBP23.2■■□□□ 1.3
CLN5-203ENST00000616833 ERLIN2O94905 339 aa23.19■■□□□ 1.3
CLN5-203ENST00000616833 LGALS2P05162 132 aa23.19■■□□□ 1.3
CLN5-203ENST00000616833 MYBL1P10243 752 aa23.19■■□□□ 1.3
CLN5-203ENST00000616833 LSP1P33241 339 aa23.19■■□□□ 1.3
CLN5-203ENST00000616833 ASPAP45381 313 aa23.19■■□□□ 1.3
CLN5-203ENST00000616833 ZNF252P-AS1Q0IIN9 211 aa23.19■■□□□ 1.3
CLN5-203ENST00000616833 CYP1B1Q16678 543 aa23.19■■□□□ 1.3
CLN5-203ENST00000616833 DENND1BQ6P3S1 775 aa23.19■■□□□ 1.3
CLN5-203ENST00000616833 ARMC9Q7Z3E5 817 aa23.19■■□□□ 1.3
CLN5-203ENST00000616833 IFT122Q9HBG6 1241 aa23.19■■□□□ 1.3
CLN5-203ENST00000616833 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.19■■□□□ 1.3
CLN5-203ENST00000616833 RRP15Q9Y3B9 282 aaKnown RBP23.19■■□□□ 1.3
CLN5-203ENST00000616833 CEP350Q5VT06 3117 aa23.19■■□□□ 1.3
CLN5-203ENST00000616833 FOXO6A8MYZ6 492 aa23.19■■□□□ 1.3
CLN5-203ENST00000616833 C22orf31O95567 290 aa23.19■■□□□ 1.3
CLN5-203ENST00000616833 ATF7P17544 494 aaPredicted RBP23.19■■□□□ 1.3
CLN5-203ENST00000616833 ZNF132P52740 706 aa23.19■■□□□ 1.3
CLN5-203ENST00000616833 ENPEPQ07075 957 aa23.19■■□□□ 1.3
CLN5-203ENST00000616833 UBR7Q8N806 425 aa23.19■■□□□ 1.3
CLN5-203ENST00000616833 FEZF2Q8TBJ5 459 aa23.19■■□□□ 1.3
CLN5-203ENST00000616833 EPS8L3Q8TE67 593 aaKnown RBP23.19■■□□□ 1.3
CLN5-203ENST00000616833 XYLT2Q9H1B5 865 aa23.19■■□□□ 1.3
CLN5-203ENST00000616833 PTPRHQ9HD43 1115 aa23.19■■□□□ 1.3
CLN5-203ENST00000616833 PASKQ96RG2 1323 aa23.19■■□□□ 1.3
CLN5-203ENST00000616833 LACTBL1A8MY62 500 aa23.18■■□□□ 1.3
CLN5-203ENST00000616833 SGSM1Q2NKQ1 1148 aa23.18■■□□□ 1.3
CLN5-203ENST00000616833 PLEKHA7Q6IQ23 1121 aa23.18■■□□□ 1.3
CLN5-203ENST00000616833 TSHZ1Q6ZSZ6 1077 aa23.18■■□□□ 1.3
CLN5-203ENST00000616833 PHF13Q86YI8 300 aaPredicted RBP23.18■■□□□ 1.3
CLN5-203ENST00000616833 TRIM11Q96F44 468 aa23.18■■□□□ 1.3
CLN5-203ENST00000616833 SCLT1Q96NL6 688 aa23.18■■□□□ 1.3
CLN5-203ENST00000616833 SDCBP2Q9H190 292 aa23.18■■□□□ 1.3
CLN5-203ENST00000616833 CXCL16Q9H2A7 254 aa23.18■■□□□ 1.3
CLN5-203ENST00000616833 FZD8Q9H461 694 aa23.18■■□□□ 1.3
CLN5-203ENST00000616833 SMYD3Q9H7B4 428 aa23.18■■□□□ 1.3
CLN5-203ENST00000616833 PDHXO00330 501 aa23.18■■□□□ 1.3
CLN5-203ENST00000616833 PODXLO00592 558 aa23.18■■□□□ 1.3
CLN5-203ENST00000616833 HBP1O60381 514 aa23.18■■□□□ 1.3
CLN5-203ENST00000616833 ITGB3P05106 788 aa23.18■■□□□ 1.3
CLN5-203ENST00000616833 MMP8P22894 467 aa23.18■■□□□ 1.3
CLN5-203ENST00000616833 DENND2CQ68D51 928 aa23.18■■□□□ 1.3
CLN5-203ENST00000616833 JADE1Q6IE81 842 aa23.18■■□□□ 1.3
CLN5-203ENST00000616833 DCUN1D2Q6PH85 259 aa23.18■■□□□ 1.3
CLN5-203ENST00000616833 TWNKQ96RR1 684 aa23.18■■□□□ 1.3
CLN5-203ENST00000616833 MROH8Q9H579 483 aa23.18■■□□□ 1.3
CLN5-203ENST00000616833 LRRC19Q9H756 370 aa23.18■■□□□ 1.3
CLN5-203ENST00000616833 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.18■■□□□ 1.3
CLN5-203ENST00000616833 ACSL3O95573 720 aa23.17■■□□□ 1.3
CLN5-203ENST00000616833 TNNC2P02585 160 aa23.17■■□□□ 1.3
CLN5-203ENST00000616833 SNAPC2Q13487 334 aa23.17■■□□□ 1.3
CLN5-203ENST00000616833 CLUL1Q15846 466 aa23.17■■□□□ 1.3
CLN5-203ENST00000616833 CCDC38Q502W7 563 aa23.17■■□□□ 1.3
CLN5-203ENST00000616833 TAPT1Q6NXT6 567 aa23.17■■□□□ 1.3
CLN5-203ENST00000616833 C10orf67Q8IYJ2 551 aa23.17■■□□□ 1.3
CLN5-203ENST00000616833 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.17■■□□□ 1.3
CLN5-203ENST00000616833 DCLK3Q9C098 648 aa23.17■■□□□ 1.3
CLN5-203ENST00000616833 PABPC3Q9H361 631 aaKnown RBP23.17■■□□□ 1.3
CLN5-203ENST00000616833 RPF1Q9H9Y2 349 aaKnown RBP23.17■■□□□ 1.3
CLN5-203ENST00000616833 ERAP1Q9NZ08 941 aa23.17■■□□□ 1.3
CLN5-203ENST00000616833 CYTH4Q9UIA0 394 aa23.17■■□□□ 1.3
CLN5-203ENST00000616833 SIX4Q9UIU6 781 aa23.17■■□□□ 1.3
CLN5-203ENST00000616833 CNTN6Q9UQ52 1028 aa23.17■■□□□ 1.3
CLN5-203ENST00000616833 IVNS1ABPQ9Y6Y0 642 aa23.17■■□□□ 1.3
CLN5-203ENST00000616833 BRCA2P51587 3418 aa23.17■■□□□ 1.3
CLN5-203ENST00000616833 NDUFAB1O14561 156 aa23.17■■□□□ 1.3
CLN5-203ENST00000616833 TP73O15350 636 aa23.17■■□□□ 1.3
CLN5-203ENST00000616833 PROZP22891 400 aa23.17■■□□□ 1.3
CLN5-203ENST00000616833 MDH1P40925 334 aaKnown RBP23.17■■□□□ 1.3
CLN5-203ENST00000616833 IRX5P78411 483 aaPredicted RBP23.17■■□□□ 1.3
CLN5-203ENST00000616833 RHOT1Q8IXI2 618 aa23.17■■□□□ 1.3
CLN5-203ENST00000616833 C1orf127Q8N9H9 656 aa23.17■■□□□ 1.3
CLN5-203ENST00000616833 ANKRD36BP1Q96IX9 119 aa23.17■■□□□ 1.3
CLN5-203ENST00000616833 MAF1Q9H063 256 aa23.17■■□□□ 1.3
CLN5-203ENST00000616833 C2orf40Q9H1Z8 148 aa23.17■■□□□ 1.3
CLN5-203ENST00000616833 MRPL47Q9HD33 250 aaKnown RBP23.17■■□□□ 1.3
CLN5-203ENST00000616833 PARVAQ9NVD7 372 aa23.17■■□□□ 1.3
CLN5-203ENST00000616833 STAG3L1P0CL83 205 aa23.16■■□□□ 1.3
CLN5-203ENST00000616833 CDR1P51861 262 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms