RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 TRAPPC10P48553 1259 aa19.22■□□□□ 0.67
TRAPPC3-209ENST00000616395 NASPP49321 788 aaPredicted RBP19.22■□□□□ 0.67
TRAPPC3-209ENST00000616395 CEBPZQ03701 1054 aaKnown RBP19.22■□□□□ 0.67
TRAPPC3-209ENST00000616395 FCHO2Q0JRZ9 810 aa19.22■□□□□ 0.67
TRAPPC3-209ENST00000616395 TWF1Q12792 350 aa19.22■□□□□ 0.67
TRAPPC3-209ENST00000616395 TMEM132AQ24JP5 1023 aa19.22■□□□□ 0.67
TRAPPC3-209ENST00000616395 CCDC183Q5T5S1 534 aa19.22■□□□□ 0.67
TRAPPC3-209ENST00000616395 L1TD1Q5T7N2 865 aaKnown RBP19.22■□□□□ 0.67
TRAPPC3-209ENST00000616395 PKN3Q6P5Z2 889 aa19.22■□□□□ 0.67
TRAPPC3-209ENST00000616395 GPIHBP1Q8IV16 184 aa19.22■□□□□ 0.67
TRAPPC3-209ENST00000616395 SHKBP1Q8TBC3 707 aa19.22■□□□□ 0.67
TRAPPC3-209ENST00000616395 E2F7Q96AV8 911 aa19.22■□□□□ 0.67
TRAPPC3-209ENST00000616395 USP28Q96RU2 1077 aa19.22■□□□□ 0.67
TRAPPC3-209ENST00000616395 EDEM2Q9BV94 578 aa19.22■□□□□ 0.67
TRAPPC3-209ENST00000616395 GPRC5CQ9NQ84 441 aa19.22■□□□□ 0.67
TRAPPC3-209ENST00000616395 ANKEF1Q9NU02 776 aa19.22■□□□□ 0.67
TRAPPC3-209ENST00000616395 WDFY3Q8IZQ1 3526 aa19.21■□□□□ 0.67
TRAPPC3-209ENST00000616395 C4orf47A7E2U8 309 aa19.21■□□□□ 0.67
TRAPPC3-209ENST00000616395 SPTLC2O15270 562 aa19.21■□□□□ 0.67
TRAPPC3-209ENST00000616395 EPHA5P54756 1037 aa19.21■□□□□ 0.67
TRAPPC3-209ENST00000616395 FAM187BQ17R55 369 aa19.21■□□□□ 0.67
TRAPPC3-209ENST00000616395 MAEAQ7L5Y9 396 aa19.21■□□□□ 0.67
TRAPPC3-209ENST00000616395 SYNPOQ8N3V7 929 aa19.21■□□□□ 0.67
TRAPPC3-209ENST00000616395 LEMD2Q8NC56 503 aa19.21■□□□□ 0.67
TRAPPC3-209ENST00000616395 ZCCHC14Q8WYQ9 949 aaKnown RBP19.21■□□□□ 0.67
TRAPPC3-209ENST00000616395 COL26A1Q96A83 441 aa19.21■□□□□ 0.67
TRAPPC3-209ENST00000616395 ZFYVE19Q96K21 471 aa19.21■□□□□ 0.67
TRAPPC3-209ENST00000616395 ZC3H10Q96K80 434 aaKnown RBP19.21■□□□□ 0.67
TRAPPC3-209ENST00000616395 UROC1Q96N76 676 aa19.21■□□□□ 0.67
TRAPPC3-209ENST00000616395 EIF2AK1Q9BQI3 630 aaKnown RBP19.21■□□□□ 0.67
TRAPPC3-209ENST00000616395 ASAH2Q9NR71 780 aa19.21■□□□□ 0.67
TRAPPC3-209ENST00000616395 DDX19AQ9NUU7 478 aaKnown RBP19.21■□□□□ 0.67
TRAPPC3-209ENST00000616395 GTSE1Q9NYZ3 720 aa19.21■□□□□ 0.67
TRAPPC3-209ENST00000616395 NBEAQ8NFP9 2946 aa19.2■□□□□ 0.66
TRAPPC3-209ENST00000616395 AKAP13Q12802 2813 aa19.2■□□□□ 0.66
TRAPPC3-209ENST00000616395 SDK1Q7Z5N4 2213 aa19.2■□□□□ 0.66
TRAPPC3-209ENST00000616395 A0A087WWV3 80 aa19.2■□□□□ 0.66
TRAPPC3-209ENST00000616395 CCDC163A0A0D9SF12 145 aa19.2■□□□□ 0.66
TRAPPC3-209ENST00000616395 PPP6R2O75170 966 aa19.2■□□□□ 0.66
TRAPPC3-209ENST00000616395 LYPLA2O95372 231 aa19.2■□□□□ 0.66
TRAPPC3-209ENST00000616395 RARRES1P49788 294 aa19.2■□□□□ 0.66
TRAPPC3-209ENST00000616395 PRPF4BQ13523 1007 aaKnown RBP19.2■□□□□ 0.66
TRAPPC3-209ENST00000616395 SH3PXD2AQ5TCZ1 1133 aa19.2■□□□□ 0.66
TRAPPC3-209ENST00000616395 EEF1DP3Q658K8 133 aa19.2■□□□□ 0.66
TRAPPC3-209ENST00000616395 CDCA2Q69YH5 1023 aaPredicted RBP19.2■□□□□ 0.66
TRAPPC3-209ENST00000616395 ZBTB8OSQ8IWT0 167 aa19.2■□□□□ 0.66
TRAPPC3-209ENST00000616395 GPT2Q8TD30 523 aa19.2■□□□□ 0.66
TRAPPC3-209ENST00000616395 CCDC43Q96MW1 224 aaKnown RBP19.2■□□□□ 0.66
TRAPPC3-209ENST00000616395 ADPGKQ9BRR6 497 aa19.2■□□□□ 0.66
TRAPPC3-209ENST00000616395 SCNM1Q9BWG6 230 aa19.2■□□□□ 0.66
TRAPPC3-209ENST00000616395 GPR88Q9GZN0 384 aa19.2■□□□□ 0.66
TRAPPC3-209ENST00000616395 FBXL5Q9UKA1 691 aa19.2■□□□□ 0.66
TRAPPC3-209ENST00000616395 USO1O60763 962 aaKnown RBP19.19■□□□□ 0.66
TRAPPC3-209ENST00000616395 AKAP3O75969 853 aa19.19■□□□□ 0.66
TRAPPC3-209ENST00000616395 SLC39A14Q15043 492 aa19.19■□□□□ 0.66
TRAPPC3-209ENST00000616395 TPGS2Q68CL5 300 aa19.19■□□□□ 0.66
TRAPPC3-209ENST00000616395 ADALQ6DHV7 355 aa19.19■□□□□ 0.66
TRAPPC3-209ENST00000616395 LINC00301Q8NCQ3 95 aa19.19■□□□□ 0.66
TRAPPC3-209ENST00000616395 LRRC3BQ96PB8 259 aa19.19■□□□□ 0.66
TRAPPC3-209ENST00000616395 HSD17B14Q9BPX1 270 aa19.19■□□□□ 0.66
TRAPPC3-209ENST00000616395 A0A1W2PQ27 194 aa19.18■□□□□ 0.66
TRAPPC3-209ENST00000616395 A0A1W2PQ64 194 aa19.18■□□□□ 0.66
TRAPPC3-209ENST00000616395 A0A1W2PQD8 194 aa19.18■□□□□ 0.66
TRAPPC3-209ENST00000616395 GOLGA6L3A6NEY3 463 aa19.18■□□□□ 0.66
TRAPPC3-209ENST00000616395 H7C4K7 107 aa19.18■□□□□ 0.66
TRAPPC3-209ENST00000616395 NEMFO60524 1076 aa19.18■□□□□ 0.66
TRAPPC3-209ENST00000616395 GADD45BO75293 160 aaPredicted RBP19.18■□□□□ 0.66
TRAPPC3-209ENST00000616395 EDN1P05305 212 aa19.18■□□□□ 0.66
TRAPPC3-209ENST00000616395 LIG1P18858 919 aa19.18■□□□□ 0.66
TRAPPC3-209ENST00000616395 MCM7P33993 719 aa19.18■□□□□ 0.66
TRAPPC3-209ENST00000616395 SOX4Q06945 474 aaPredicted RBP19.18■□□□□ 0.66
TRAPPC3-209ENST00000616395 MRPL58Q14197 206 aaKnown RBP19.18■□□□□ 0.66
TRAPPC3-209ENST00000616395 PLK5Q496M5 336 aa19.18■□□□□ 0.66
TRAPPC3-209ENST00000616395 DAB2IPQ5VWQ8 1189 aa19.18■□□□□ 0.66
TRAPPC3-209ENST00000616395 PIGOQ8TEQ8 1089 aa19.18■□□□□ 0.66
TRAPPC3-209ENST00000616395 CCDC34Q96HJ3 373 aa19.18■□□□□ 0.66
TRAPPC3-209ENST00000616395 NAP1L4Q99733 375 aaKnown RBP19.18■□□□□ 0.66
TRAPPC3-209ENST00000616395 TMEM60Q9H2L4 133 aa19.18■□□□□ 0.66
TRAPPC3-209ENST00000616395 A0A1W2PRU2 124 aa19.17■□□□□ 0.66
TRAPPC3-209ENST00000616395 CALCRLQ16602 461 aa19.17■□□□□ 0.66
TRAPPC3-209ENST00000616395 MAPK6Q16659 721 aa19.17■□□□□ 0.66
TRAPPC3-209ENST00000616395 CTXN3Q4LDR2 81 aa19.17■□□□□ 0.66
TRAPPC3-209ENST00000616395 STXBP5Q5T5C0 1151 aa19.17■□□□□ 0.66
TRAPPC3-209ENST00000616395 ARID3BQ8IVW6 561 aaPredicted RBP19.17■□□□□ 0.66
TRAPPC3-209ENST00000616395 DUSP15Q9H1R2 295 aaPredicted RBP19.17■□□□□ 0.66
TRAPPC3-209ENST00000616395 AFF4Q9UHB7 1163 aaKnown RBP19.17■□□□□ 0.66
TRAPPC3-209ENST00000616395 SLC8A2Q9UPR5 921 aa19.17■□□□□ 0.66
TRAPPC3-209ENST00000616395 DSPP15924 2871 aaKnown RBP19.17■□□□□ 0.66
TRAPPC3-209ENST00000616395 SMIM28A0A1B0GU29 152 aa19.16■□□□□ 0.66
TRAPPC3-209ENST00000616395 SYN3O14994 580 aa19.16■□□□□ 0.66
TRAPPC3-209ENST00000616395 ZNF445P59923 1031 aa19.16■□□□□ 0.66
TRAPPC3-209ENST00000616395 CREB5Q02930 508 aa19.16■□□□□ 0.66
TRAPPC3-209ENST00000616395 TNK2Q07912 1038 aa19.16■□□□□ 0.66
TRAPPC3-209ENST00000616395 ZSCAN23Q3MJ62 389 aa19.16■□□□□ 0.66
TRAPPC3-209ENST00000616395 ARHGAP29Q52LW3 1261 aa19.16■□□□□ 0.66
TRAPPC3-209ENST00000616395 SLFN12Q8IYM2 578 aa19.16■□□□□ 0.66
TRAPPC3-209ENST00000616395 LRRC3Q9BY71 257 aa19.16■□□□□ 0.66
TRAPPC3-209ENST00000616395 C2orf40Q9H1Z8 148 aa19.16■□□□□ 0.66
TRAPPC3-209ENST00000616395 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.16■□□□□ 0.66
TRAPPC3-209ENST00000616395 POLR3BQ9NW08 1133 aaPredicted RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms