RNA–Protein interactions for RNA: ENST00000616002.1

RABGAP1-213, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene RABGAP1, Length 1,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-213ENST00000616002 MAGOHBQ96A72 148 aaKnown RBP11.84□□□□□ -0.51
RABGAP1-213ENST00000616002 HVCN1Q96D96 273 aa11.84□□□□□ -0.51
RABGAP1-213ENST00000616002 SPATA33Q96N06 139 aa11.84□□□□□ -0.51
RABGAP1-213ENST00000616002 UIMC1Q96RL1 719 aa11.84□□□□□ -0.51
RABGAP1-213ENST00000616002 FMO2Q99518 471 aa11.84□□□□□ -0.51
RABGAP1-213ENST00000616002 DDX25Q9UHL0 483 aaKnown RBP11.84□□□□□ -0.51
RABGAP1-213ENST00000616002 RASAL2Q9UJF2 1139 aa11.84□□□□□ -0.51
RABGAP1-213ENST00000616002 SLC12A4Q9UP95 1085 aa11.84□□□□□ -0.51
RABGAP1-213ENST00000616002 POTEMA6NI47 508 aa11.83□□□□□ -0.52
RABGAP1-213ENST00000616002 MIF4GDA9UHW6 222 aaKnown RBP11.83□□□□□ -0.52
RABGAP1-213ENST00000616002 DAPK3O43293 454 aa11.83□□□□□ -0.52
RABGAP1-213ENST00000616002 TPD52L2O43399 206 aaKnown RBP11.83□□□□□ -0.52
RABGAP1-213ENST00000616002 TDP2O95551 362 aa11.83□□□□□ -0.52
RABGAP1-213ENST00000616002 MYCLP12524 364 aaPredicted RBP11.83□□□□□ -0.52
RABGAP1-213ENST00000616002 HOXD8P13378 290 aaPredicted RBP11.83□□□□□ -0.52
RABGAP1-213ENST00000616002 SLC12A3P55017 1021 aa11.83□□□□□ -0.52
RABGAP1-213ENST00000616002 HTRA4P83105 476 aaPredicted RBP11.83□□□□□ -0.52
RABGAP1-213ENST00000616002 QPCTQ16769 361 aa11.83□□□□□ -0.52
RABGAP1-213ENST00000616002 TIGD5Q53EQ6 642 aa11.83□□□□□ -0.52
RABGAP1-213ENST00000616002 HERC4Q5GLZ8 1057 aaPredicted RBP11.83□□□□□ -0.52
RABGAP1-213ENST00000616002 TLDC1Q6P9B6 456 aa11.83□□□□□ -0.52
RABGAP1-213ENST00000616002 SERINC5Q86VE9 423 aa11.83□□□□□ -0.52
RABGAP1-213ENST00000616002 MAB21L3Q8N8X9 362 aa11.83□□□□□ -0.52
RABGAP1-213ENST00000616002 RFFLQ8WZ73 363 aa11.83□□□□□ -0.52
RABGAP1-213ENST00000616002 SAMD11Q96NU1 681 aa11.83□□□□□ -0.52
RABGAP1-213ENST00000616002 ANKRD27Q96NW4 1050 aa11.83□□□□□ -0.52
RABGAP1-213ENST00000616002 YME1L1Q96TA2 773 aa11.83□□□□□ -0.52
RABGAP1-213ENST00000616002 MKNK1Q9BUB5 465 aa11.83□□□□□ -0.52
RABGAP1-213ENST00000616002 AMNQ9BXJ7 453 aa11.83□□□□□ -0.52
RABGAP1-213ENST00000616002 ROPN1BQ9BZX4 212 aaPredicted RBP11.83□□□□□ -0.52
RABGAP1-213ENST00000616002 NSRP1Q9H0G5 558 aaKnown RBP11.83□□□□□ -0.52
RABGAP1-213ENST00000616002 NEUROG2Q9H2A3 272 aa11.83□□□□□ -0.52
RABGAP1-213ENST00000616002 JMJD4Q9H9V9 463 aa11.83□□□□□ -0.52
RABGAP1-213ENST00000616002 ROPN1Q9HAT0 212 aaPredicted RBP11.83□□□□□ -0.52
RABGAP1-213ENST00000616002 KCNMB3Q9NPA1 279 aa11.83□□□□□ -0.52
RABGAP1-213ENST00000616002 ZDHHC18Q9NUE0 388 aa11.83□□□□□ -0.52
RABGAP1-213ENST00000616002 TYW1Q9NV66 732 aaKnown RBP11.83□□□□□ -0.52
RABGAP1-213ENST00000616002 TMEM260Q9NX78 707 aa11.83□□□□□ -0.52
RABGAP1-213ENST00000616002 CNOT8Q9UFF9 292 aaKnown RBP11.83□□□□□ -0.52
RABGAP1-213ENST00000616002 TPX2Q9ULW0 747 aaKnown RBP11.83□□□□□ -0.52
RABGAP1-213ENST00000616002 MICAL3Q7RTP6 2002 aa11.82□□□□□ -0.52
RABGAP1-213ENST00000616002 H3BQ06 376 aaPredicted RBP11.82□□□□□ -0.52
RABGAP1-213ENST00000616002 SORBS3O60504 671 aa11.82□□□□□ -0.52
RABGAP1-213ENST00000616002 NR2F2P24468 414 aa11.82□□□□□ -0.52
RABGAP1-213ENST00000616002 STAT1P42224 750 aa11.82□□□□□ -0.52
RABGAP1-213ENST00000616002 HSD17B4P51659 736 aa11.82□□□□□ -0.52
RABGAP1-213ENST00000616002 ECM1Q16610 540 aa11.82□□□□□ -0.52
RABGAP1-213ENST00000616002 HSDL1Q3SXM5 330 aa11.82□□□□□ -0.52
RABGAP1-213ENST00000616002 EPC2Q52LR7 807 aa11.82□□□□□ -0.52
RABGAP1-213ENST00000616002 PLEKHG4Q58EX7 1191 aa11.82□□□□□ -0.52
RABGAP1-213ENST00000616002 CELF3Q5SZQ8 465 aaKnown RBP11.82□□□□□ -0.52
RABGAP1-213ENST00000616002 EP400NLQ6ZTU2 488 aa11.82□□□□□ -0.52
RABGAP1-213ENST00000616002 GPBP1Q86WP2 473 aa11.82□□□□□ -0.52
RABGAP1-213ENST00000616002 SYT2Q8N9I0 419 aaPredicted RBP11.82□□□□□ -0.52
RABGAP1-213ENST00000616002 GLIS3Q8NEA6 775 aa11.82□□□□□ -0.52
RABGAP1-213ENST00000616002 NEK9Q8TD19 979 aa11.82□□□□□ -0.52
RABGAP1-213ENST00000616002 SP7Q8TDD2 431 aaPredicted RBP11.82□□□□□ -0.52
RABGAP1-213ENST00000616002 ATP8B4Q8TF62 1192 aa11.82□□□□□ -0.52
RABGAP1-213ENST00000616002 SEPT8Q92599 483 aa11.82□□□□□ -0.52
RABGAP1-213ENST00000616002 ATP6V0A1Q93050 837 aa11.82□□□□□ -0.52
RABGAP1-213ENST00000616002 PDCD2LQ9BRP1 358 aa11.82□□□□□ -0.52
RABGAP1-213ENST00000616002 CD248Q9HCU0 757 aa11.82□□□□□ -0.52
RABGAP1-213ENST00000616002 SIX2Q9NPC8 291 aa11.82□□□□□ -0.52
RABGAP1-213ENST00000616002 PACSIN2Q9UNF0 486 aaPredicted RBP11.82□□□□□ -0.52
RABGAP1-213ENST00000616002 FAM50BQ9Y247 325 aa11.82□□□□□ -0.52
RABGAP1-213ENST00000616002 PIEZO1Q92508 2521 aa11.82□□□□□ -0.52
RABGAP1-213ENST00000616002 C17orf102A2RUQ5 167 aa11.81□□□□□ -0.52
RABGAP1-213ENST00000616002 DDX3YO15523 660 aaKnown RBP11.81□□□□□ -0.52
RABGAP1-213ENST00000616002 GAP43P17677 238 aa11.81□□□□□ -0.52
RABGAP1-213ENST00000616002 CHRNA3P32297 505 aa11.81□□□□□ -0.52
RABGAP1-213ENST00000616002 ZNF131P52739 623 aa11.81□□□□□ -0.52
RABGAP1-213ENST00000616002 ELF3P78545 371 aaPredicted RBP11.81□□□□□ -0.52
RABGAP1-213ENST00000616002 ZNF268Q14587 947 aaPredicted RBP11.81□□□□□ -0.52
RABGAP1-213ENST00000616002 ALYREFQ86V81 257 aaKnown RBP11.81□□□□□ -0.52
RABGAP1-213ENST00000616002 FAM228AQ86W67 206 aa11.81□□□□□ -0.52
RABGAP1-213ENST00000616002 ERMNQ8TAM6 284 aa11.81□□□□□ -0.52
RABGAP1-213ENST00000616002 MIEF2Q96C03 454 aa11.81□□□□□ -0.52
RABGAP1-213ENST00000616002 SYT11Q9BT88 431 aa11.81□□□□□ -0.52
RABGAP1-213ENST00000616002 STK33Q9BYT3 514 aa11.81□□□□□ -0.52
RABGAP1-213ENST00000616002 DDX47Q9H0S4 455 aaKnown RBP11.81□□□□□ -0.52
RABGAP1-213ENST00000616002 EBF2Q9HAK2 575 aa11.81□□□□□ -0.52
RABGAP1-213ENST00000616002 MAP3K20Q9NYL2 800 aaKnown RBP11.81□□□□□ -0.52
RABGAP1-213ENST00000616002 PCYOX1Q9UHG3 505 aa11.81□□□□□ -0.52
RABGAP1-213ENST00000616002 AMACRQ9UHK6 382 aa11.81□□□□□ -0.52
RABGAP1-213ENST00000616002 SUFUQ9UMX1 484 aa11.81□□□□□ -0.52
RABGAP1-213ENST00000616002 UBE4BO95155 1302 aa11.81□□□□□ -0.52
RABGAP1-213ENST00000616002 H3BNC9 293 aa11.8□□□□□ -0.52
RABGAP1-213ENST00000616002 H3BRB1 525 aa11.8□□□□□ -0.52
RABGAP1-213ENST00000616002 DDX3XO00571 662 aaKnown RBP eCLIP11.8□□□□□ -0.52
RABGAP1-213ENST00000616002 CLGNO14967 610 aa11.8□□□□□ -0.52
RABGAP1-213ENST00000616002 EIF3DO15371 548 aaKnown RBP eCLIP11.8□□□□□ -0.52
RABGAP1-213ENST00000616002 TTI1O43156 1089 aa11.8□□□□□ -0.52
RABGAP1-213ENST00000616002 RGS20O76081 388 aa11.8□□□□□ -0.52
RABGAP1-213ENST00000616002 UPP2O95045 317 aa11.8□□□□□ -0.52
RABGAP1-213ENST00000616002 TGFB3P10600 412 aa11.8□□□□□ -0.52
RABGAP1-213ENST00000616002 SLC9A1P19634 815 aa11.8□□□□□ -0.52
RABGAP1-213ENST00000616002 TMOD1P28289 359 aa11.8□□□□□ -0.52
RABGAP1-213ENST00000616002 PMS2P54278 862 aa11.8□□□□□ -0.52
RABGAP1-213ENST00000616002 DR1Q01658 176 aa11.8□□□□□ -0.52
RABGAP1-213ENST00000616002 GPM6BQ13491 265 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms