RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 LIN9Q5TKA1 542 aa18.03■□□□□ 0.48
CBWD3-211ENST00000615061 ZNF658Q5TYW1 1059 aaPredicted RBP18.03■□□□□ 0.48
CBWD3-211ENST00000615061 WSCD1Q658N2 575 aa18.03■□□□□ 0.48
CBWD3-211ENST00000615061 CEP135Q66GS9 1140 aa18.03■□□□□ 0.48
CBWD3-211ENST00000615061 C15orf39Q6ZRI6 1047 aa18.03■□□□□ 0.48
CBWD3-211ENST00000615061 CMASQ8NFW8 434 aaPredicted RBP18.03■□□□□ 0.48
CBWD3-211ENST00000615061 ZNF461Q8TAF7 563 aa18.03■□□□□ 0.48
CBWD3-211ENST00000615061 TMEM174Q8WUU8 243 aa18.03■□□□□ 0.48
CBWD3-211ENST00000615061 SMG7Q92540 1137 aaKnown RBP18.03■□□□□ 0.48
CBWD3-211ENST00000615061 ZNF560Q96MR9 790 aa18.03■□□□□ 0.48
CBWD3-211ENST00000615061 TMEM209Q96SK2 561 aa18.03■□□□□ 0.48
CBWD3-211ENST00000615061 CGRRF1Q99675 332 aa18.03■□□□□ 0.48
CBWD3-211ENST00000615061 HOOK1Q9UJC3 728 aaKnown RBP18.03■□□□□ 0.48
CBWD3-211ENST00000615061 NOTCH4Q99466 2003 aa18.03■□□□□ 0.48
CBWD3-211ENST00000615061 TNNC2P02585 160 aa18.02■□□□□ 0.48
CBWD3-211ENST00000615061 NR2F2P24468 414 aa18.02■□□□□ 0.48
CBWD3-211ENST00000615061 DLG4P78352 724 aa18.02■□□□□ 0.48
CBWD3-211ENST00000615061 BFSP1Q12934 665 aa18.02■□□□□ 0.48
CBWD3-211ENST00000615061 SV2CQ496J9 727 aa18.02■□□□□ 0.48
CBWD3-211ENST00000615061 ZCWPW2Q504Y3 356 aa18.02■□□□□ 0.48
CBWD3-211ENST00000615061 TRAPPC11Q7Z392 1133 aa18.02■□□□□ 0.48
CBWD3-211ENST00000615061 ELOA2Q8IYF1 753 aaPredicted RBP18.02■□□□□ 0.48
CBWD3-211ENST00000615061 PARD3BQ8TEW8 1205 aa18.02■□□□□ 0.48
CBWD3-211ENST00000615061 NECTIN4Q96NY8 510 aa18.02■□□□□ 0.48
CBWD3-211ENST00000615061 RTP3Q9BQQ7 232 aa18.02■□□□□ 0.48
CBWD3-211ENST00000615061 ZDHHC7Q9NXF8 308 aa18.02■□□□□ 0.48
CBWD3-211ENST00000615061 MAN1B1Q9UKM7 699 aa18.02■□□□□ 0.48
CBWD3-211ENST00000615061 LRRIQ3A6PVS8 624 aaPredicted RBP18.02■□□□□ 0.47
CBWD3-211ENST00000615061 CCL16O15467 120 aa18.02■□□□□ 0.47
CBWD3-211ENST00000615061 SEC24AO95486 1093 aa18.02■□□□□ 0.47
CBWD3-211ENST00000615061 CST3P01034 146 aaPredicted RBP18.02■□□□□ 0.47
CBWD3-211ENST00000615061 CYP11A1P05108 521 aa18.02■□□□□ 0.47
CBWD3-211ENST00000615061 CPB1P15086 417 aa18.02■□□□□ 0.47
CBWD3-211ENST00000615061 RBP5P82980 135 aa18.02■□□□□ 0.47
CBWD3-211ENST00000615061 PPM1LQ5SGD2 360 aa18.02■□□□□ 0.47
CBWD3-211ENST00000615061 ELMSAN1Q6PJG2 1045 aa18.02■□□□□ 0.47
CBWD3-211ENST00000615061 RNF19BQ6ZMZ0 732 aa18.02■□□□□ 0.47
CBWD3-211ENST00000615061 LRRC52Q8N7C0 313 aa18.02■□□□□ 0.47
CBWD3-211ENST00000615061 OR10T2Q8NGX3 314 aa18.02■□□□□ 0.47
CBWD3-211ENST00000615061 PGLYRP2Q96PD5 576 aa18.02■□□□□ 0.47
CBWD3-211ENST00000615061 PRKD2Q9BZL6 878 aa18.02■□□□□ 0.47
CBWD3-211ENST00000615061 LOC730098B7Z3J9 87 aa18.01■□□□□ 0.47
CBWD3-211ENST00000615061 AKAP3O75969 853 aa18.01■□□□□ 0.47
CBWD3-211ENST00000615061 ATF2P15336 505 aa18.01■□□□□ 0.47
CBWD3-211ENST00000615061 BMP6P22004 513 aa18.01■□□□□ 0.47
CBWD3-211ENST00000615061 PNPLA4P41247 253 aa18.01■□□□□ 0.47
CBWD3-211ENST00000615061 PMS1P54277 932 aaKnown RBP18.01■□□□□ 0.47
CBWD3-211ENST00000615061 ADCY1Q08828 1119 aa18.01■□□□□ 0.47
CBWD3-211ENST00000615061 CAMK4Q16566 473 aa18.01■□□□□ 0.47
CBWD3-211ENST00000615061 L1RE1Q9UN81 338 aa18.01■□□□□ 0.47
CBWD3-211ENST00000615061 POLIQ9UNA4 740 aa18.01■□□□□ 0.47
CBWD3-211ENST00000615061 SNX9Q9Y5X1 595 aa18.01■□□□□ 0.47
CBWD3-211ENST00000615061 C2CD4DB7Z1M9 353 aa18■□□□□ 0.47
CBWD3-211ENST00000615061 BIN1O00499 593 aa18■□□□□ 0.47
CBWD3-211ENST00000615061 PAPLNO95428 1278 aa18■□□□□ 0.47
CBWD3-211ENST00000615061 VNN2O95498 520 aa18■□□□□ 0.47
CBWD3-211ENST00000615061 PAX3P23760 479 aa18■□□□□ 0.47
CBWD3-211ENST00000615061 HPDLQ96IR7 371 aa18■□□□□ 0.47
CBWD3-211ENST00000615061 CRISPLD1Q9H336 500 aa18■□□□□ 0.47
CBWD3-211ENST00000615061 PIDD1Q9HB75 910 aa18■□□□□ 0.47
CBWD3-211ENST00000615061 CYP4F11Q9HBI6 524 aa18■□□□□ 0.47
CBWD3-211ENST00000615061 CD44P16070 742 aaKnown RBP17.99■□□□□ 0.47
CBWD3-211ENST00000615061 NTHL1P78549 312 aa17.99■□□□□ 0.47
CBWD3-211ENST00000615061 ADAM9Q13443 819 aa17.99■□□□□ 0.47
CBWD3-211ENST00000615061 MYBPC2Q14324 1141 aa17.99■□□□□ 0.47
CBWD3-211ENST00000615061 NFIL3Q16649 462 aa17.99■□□□□ 0.47
CBWD3-211ENST00000615061 CLEC17AQ6ZS10 378 aa17.99■□□□□ 0.47
CBWD3-211ENST00000615061 CCDC149Q6ZUS6 474 aa17.99■□□□□ 0.47
CBWD3-211ENST00000615061 ADSSL1Q8N142 457 aa17.99■□□□□ 0.47
CBWD3-211ENST00000615061 PDCL2Q8N4E4 241 aa17.99■□□□□ 0.47
CBWD3-211ENST00000615061 ELMO3Q96BJ8 720 aa17.99■□□□□ 0.47
CBWD3-211ENST00000615061 HCFC1R1Q9NWW0 138 aa17.99■□□□□ 0.47
CBWD3-211ENST00000615061 FRMD4BQ9Y2L6 1034 aa17.99■□□□□ 0.47
CBWD3-211ENST00000615061 TRIM49BA6NDI0 452 aa17.99■□□□□ 0.47
CBWD3-211ENST00000615061 OR6C75A6NL08 312 aa17.99■□□□□ 0.47
CBWD3-211ENST00000615061 HCRTO43612 131 aa17.99■□□□□ 0.47
CBWD3-211ENST00000615061 N4BP1O75113 896 aaKnown RBP17.99■□□□□ 0.47
CBWD3-211ENST00000615061 ELF1P32519 619 aa17.99■□□□□ 0.47
CBWD3-211ENST00000615061 UVSSAQ2YD98 709 aa17.99■□□□□ 0.47
CBWD3-211ENST00000615061 COBLL1Q53SF7 1204 aa17.99■□□□□ 0.47
CBWD3-211ENST00000615061 C1orf220Q5T0J3 134 aa17.99■□□□□ 0.47
CBWD3-211ENST00000615061 TDRD10Q5VZ19 366 aaKnown RBP17.99■□□□□ 0.47
CBWD3-211ENST00000615061 TPGS2Q68CL5 300 aa17.99■□□□□ 0.47
CBWD3-211ENST00000615061 CENPPQ6IPU0 288 aa17.99■□□□□ 0.47
CBWD3-211ENST00000615061 GRASPQ7Z6J2 395 aaPredicted RBP17.99■□□□□ 0.47
CBWD3-211ENST00000615061 RNF135Q8IUD6 432 aa17.99■□□□□ 0.47
CBWD3-211ENST00000615061 WDR6Q9NNW5 1121 aaKnown RBP17.99■□□□□ 0.47
CBWD3-211ENST00000615061 GDAP2Q9NXN4 497 aa17.99■□□□□ 0.47
CBWD3-211ENST00000615061 AFF4Q9UHB7 1163 aaKnown RBP17.99■□□□□ 0.47
CBWD3-211ENST00000615061 DSEQ9UL01 958 aa17.99■□□□□ 0.47
CBWD3-211ENST00000615061 R3HCC1Q9Y3T6 440 aaKnown RBP17.99■□□□□ 0.47
CBWD3-211ENST00000615061 ARHGEF37A1IGU5 675 aa17.98■□□□□ 0.47
CBWD3-211ENST00000615061 PRRG1O14668 218 aa17.98■□□□□ 0.47
CBWD3-211ENST00000615061 HNRNPA1P09651 372 aaKnown RBP eCLIP17.98■□□□□ 0.47
CBWD3-211ENST00000615061 CLDN10P78369 228 aa17.98■□□□□ 0.47
CBWD3-211ENST00000615061 MYO1EQ12965 1108 aa17.98■□□□□ 0.47
CBWD3-211ENST00000615061 GPR17Q13304 367 aa17.98■□□□□ 0.47
CBWD3-211ENST00000615061 SOWAHAQ2M3V2 549 aa17.98■□□□□ 0.47
CBWD3-211ENST00000615061 LRRTM3Q86VH5 581 aa17.98■□□□□ 0.47
CBWD3-211ENST00000615061 OSTM1Q86WC4 334 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms