RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 MYBPC2Q14324 1141 aa13.23□□□□□ -0.29
MSH6-213ENST00000614496 UGCGQ16739 394 aa13.23□□□□□ -0.29
MSH6-213ENST00000614496 ZNF699Q32M78 642 aa13.23□□□□□ -0.29
MSH6-213ENST00000614496 LACTB2Q53H82 288 aaPredicted RBP13.23□□□□□ -0.29
MSH6-213ENST00000614496 SLFN12LQ6IEE8 588 aa13.23□□□□□ -0.29
MSH6-213ENST00000614496 MFSD7Q6UXD7 560 aa13.23□□□□□ -0.29
MSH6-213ENST00000614496 TRIM72Q6ZMU5 477 aa13.23□□□□□ -0.29
MSH6-213ENST00000614496 NLRP9Q7RTR0 991 aa13.23□□□□□ -0.29
MSH6-213ENST00000614496 AGGF1Q8N302 714 aaeCLIP13.23□□□□□ -0.29
MSH6-213ENST00000614496 ZBTB45Q96K62 511 aaPredicted RBP13.23□□□□□ -0.29
MSH6-213ENST00000614496 LRRC19Q9H756 370 aa13.23□□□□□ -0.29
MSH6-213ENST00000614496 NRBP2Q9NSY0 501 aa13.23□□□□□ -0.29
MSH6-213ENST00000614496 NDC80O14777 642 aa13.23□□□□□ -0.29
MSH6-213ENST00000614496 CHRNB2P17787 502 aa13.23□□□□□ -0.29
MSH6-213ENST00000614496 CCNG2Q16589 344 aa13.23□□□□□ -0.29
MSH6-213ENST00000614496 MTDHQ86UE4 582 aaKnown RBP13.23□□□□□ -0.29
MSH6-213ENST00000614496 CCDC125Q86Z20 511 aa13.23□□□□□ -0.29
MSH6-213ENST00000614496 MBOAT7Q96N66 472 aa13.23□□□□□ -0.29
MSH6-213ENST00000614496 TTC1Q99614 292 aa13.23□□□□□ -0.29
MSH6-213ENST00000614496 MOV10L1Q9BXT6 1211 aaKnown RBP13.23□□□□□ -0.29
MSH6-213ENST00000614496 JPH1Q9HDC5 661 aaPredicted RBP13.23□□□□□ -0.29
MSH6-213ENST00000614496 MCM8Q9UJA3 840 aa13.23□□□□□ -0.29
MSH6-213ENST00000614496 PLIN4Q96Q06 1357 aa13.22□□□□□ -0.29
MSH6-213ENST00000614496 ECM29Q5VYK3 1845 aa13.22□□□□□ -0.29
MSH6-213ENST00000614496 ATP9AO75110 1047 aa13.22□□□□□ -0.29
MSH6-213ENST00000614496 CYP1A2P05177 515 aa13.22□□□□□ -0.29
MSH6-213ENST00000614496 ICAM1P05362 532 aa13.22□□□□□ -0.29
MSH6-213ENST00000614496 PAEPP09466 180 aa13.22□□□□□ -0.29
MSH6-213ENST00000614496 CUL2Q13617 745 aa13.22□□□□□ -0.29
MSH6-213ENST00000614496 TAF1BQ53T94 588 aaPredicted RBP13.22□□□□□ -0.29
MSH6-213ENST00000614496 RASIP1Q5U651 963 aa13.22□□□□□ -0.29
MSH6-213ENST00000614496 GPAT2Q6NUI2 795 aa13.22□□□□□ -0.29
MSH6-213ENST00000614496 SYTL5Q8TDW5 730 aaPredicted RBP13.22□□□□□ -0.29
MSH6-213ENST00000614496 RMDN2Q96LZ7 410 aa13.22□□□□□ -0.29
MSH6-213ENST00000614496 CPSF2Q9P2I0 782 aaKnown RBP13.22□□□□□ -0.29
MSH6-213ENST00000614496 ZMYM2Q9UBW7 1377 aa13.22□□□□□ -0.29
MSH6-213ENST00000614496 C5orf60A6NFR6 353 aa13.22□□□□□ -0.29
MSH6-213ENST00000614496 EPHB2P29323 1055 aa13.22□□□□□ -0.29
MSH6-213ENST00000614496 TAS2R40P59535 323 aa13.22□□□□□ -0.29
MSH6-213ENST00000614496 EIF3EP60228 445 aaKnown RBP13.22□□□□□ -0.29
MSH6-213ENST00000614496 JAG1P78504 1218 aa13.22□□□□□ -0.29
MSH6-213ENST00000614496 RNASELQ05823 741 aaKnown RBP13.22□□□□□ -0.29
MSH6-213ENST00000614496 KDSRQ06136 332 aa13.22□□□□□ -0.29
MSH6-213ENST00000614496 CRYMQ14894 314 aa13.22□□□□□ -0.29
MSH6-213ENST00000614496 SLC9A9Q8IVB4 645 aa13.22□□□□□ -0.29
MSH6-213ENST00000614496 DAW1Q8N136 415 aa13.22□□□□□ -0.29
MSH6-213ENST00000614496 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.22□□□□□ -0.29
MSH6-213ENST00000614496 FITM2Q8N6M3 262 aa13.22□□□□□ -0.29
MSH6-213ENST00000614496 NSUN6Q8TEA1 469 aaKnown RBP13.22□□□□□ -0.29
MSH6-213ENST00000614496 HEXIM2Q96MH2 286 aaKnown RBP13.22□□□□□ -0.29
MSH6-213ENST00000614496 TSSK1BQ9BXA7 367 aa13.22□□□□□ -0.29
MSH6-213ENST00000614496 DMAC2Q9NW81 257 aa13.22□□□□□ -0.29
MSH6-213ENST00000614496 STOML1Q9UBI4 398 aa13.22□□□□□ -0.29
MSH6-213ENST00000614496 G3BP2Q9UN86 482 aaKnown RBP13.22□□□□□ -0.29
MSH6-213ENST00000614496 LDHAP00338 332 aaKnown RBP13.22□□□□□ -0.29
MSH6-213ENST00000614496 KRT3P12035 628 aa13.22□□□□□ -0.29
MSH6-213ENST00000614496 TBXAS1P24557 533 aaPredicted RBP13.22□□□□□ -0.29
MSH6-213ENST00000614496 PSMC4P43686 418 aa13.22□□□□□ -0.29
MSH6-213ENST00000614496 PTK6Q13882 451 aa13.22□□□□□ -0.29
MSH6-213ENST00000614496 KLHL38Q2WGJ6 581 aa13.22□□□□□ -0.29
MSH6-213ENST00000614496 PRAMEF18Q5VWM3 479 aa13.22□□□□□ -0.29
MSH6-213ENST00000614496 CYP4X1Q8N118 509 aa13.22□□□□□ -0.29
MSH6-213ENST00000614496 SMC1BQ8NDV3 1235 aa13.22□□□□□ -0.29
MSH6-213ENST00000614496 ATG4CQ96DT6 458 aa13.22□□□□□ -0.29
MSH6-213ENST00000614496 ZNF317Q96PQ6 595 aaPredicted RBP13.22□□□□□ -0.29
MSH6-213ENST00000614496 FHDC1Q9C0D6 1143 aaPredicted RBP13.22□□□□□ -0.29
MSH6-213ENST00000614496 SEPT10Q9P0V9 454 aa13.22□□□□□ -0.29
MSH6-213ENST00000614496 O00370 1275 aa13.21□□□□□ -0.29
MSH6-213ENST00000614496 FSCN2O14926 492 aa13.21□□□□□ -0.29
MSH6-213ENST00000614496 SKIP12755 728 aa13.21□□□□□ -0.29
MSH6-213ENST00000614496 CTCFP49711 727 aaPredicted RBP13.21□□□□□ -0.29
MSH6-213ENST00000614496 SLC15A2Q16348 729 aa13.21□□□□□ -0.29
MSH6-213ENST00000614496 FAXCQ5TGI0 409 aa13.21□□□□□ -0.29
MSH6-213ENST00000614496 NCAPG2Q86XI2 1143 aa13.21□□□□□ -0.29
MSH6-213ENST00000614496 FAM71DQ8N9W8 422 aa13.21□□□□□ -0.29
MSH6-213ENST00000614496 ANKRD36BP1Q96IX9 119 aa13.21□□□□□ -0.29
MSH6-213ENST00000614496 SMYD3Q9H7B4 428 aa13.21□□□□□ -0.29
MSH6-213ENST00000614496 PRM3Q9NNZ6 103 aa13.21□□□□□ -0.29
MSH6-213ENST00000614496 HEY2Q9UBP5 337 aa13.21□□□□□ -0.29
MSH6-213ENST00000614496 XPO7Q9UIA9 1087 aaKnown RBP13.21□□□□□ -0.29
MSH6-213ENST00000614496 PIK3CDO00329 1044 aa13.21□□□□□ -0.29
MSH6-213ENST00000614496 OPHN1O60890 802 aa13.21□□□□□ -0.29
MSH6-213ENST00000614496 GRAP2O75791 330 aa13.21□□□□□ -0.29
MSH6-213ENST00000614496 ZBED1O96006 694 aa13.21□□□□□ -0.29
MSH6-213ENST00000614496 MUTP22033 750 aa13.21□□□□□ -0.29
MSH6-213ENST00000614496 PEX5P50542 639 aa13.21□□□□□ -0.29
MSH6-213ENST00000614496 YWHAEP62258 255 aaKnown RBP13.21□□□□□ -0.29
MSH6-213ENST00000614496 TNFAIP1Q13829 316 aa13.21□□□□□ -0.29
MSH6-213ENST00000614496 SIAH1Q8IUQ4 282 aa13.21□□□□□ -0.29
MSH6-213ENST00000614496 MIEF2Q96C03 454 aa13.21□□□□□ -0.29
MSH6-213ENST00000614496 METTL5Q9NRN9 209 aaKnown RBP13.21□□□□□ -0.29
MSH6-213ENST00000614496 ANKEF1Q9NU02 776 aa13.21□□□□□ -0.29
MSH6-213ENST00000614496 SENP1Q9P0U3 644 aa13.21□□□□□ -0.29
MSH6-213ENST00000614496 FBXO40Q9UH90 709 aa13.21□□□□□ -0.29
MSH6-213ENST00000614496 IVNS1ABPQ9Y6Y0 642 aa13.21□□□□□ -0.29
MSH6-213ENST00000614496 EXTL3O43909 919 aa13.21□□□□□ -0.3
MSH6-213ENST00000614496 ENO1P06733 434 aaKnown RBP13.21□□□□□ -0.3
MSH6-213ENST00000614496 RPA3P35244 121 aaPredicted RBP13.21□□□□□ -0.3
MSH6-213ENST00000614496 CAP2P40123 477 aa13.21□□□□□ -0.3
MSH6-213ENST00000614496 CDH6P55285 790 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms