RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 PPP1R16BQ96T49 567 aa14.86□□□□□ -0.03
COL6A1-207ENST00000612273 TMEM109Q9BVC6 243 aa14.86□□□□□ -0.03
COL6A1-207ENST00000612273 KIAA1586Q9HCI6 787 aa14.86□□□□□ -0.03
COL6A1-207ENST00000612273 GRID1Q9ULK0 1009 aa14.86□□□□□ -0.03
COL6A1-207ENST00000612273 VNN1O95497 513 aa14.86□□□□□ -0.03
COL6A1-207ENST00000612273 POTEJP0CG39 1038 aa14.86□□□□□ -0.03
COL6A1-207ENST00000612273 TNFSF9P41273 254 aa14.86□□□□□ -0.03
COL6A1-207ENST00000612273 LACTBP83111 547 aaPredicted RBP14.86□□□□□ -0.03
COL6A1-207ENST00000612273 BNIP1Q12981 228 aa14.86□□□□□ -0.03
COL6A1-207ENST00000612273 TMEM132AQ24JP5 1023 aa14.86□□□□□ -0.03
COL6A1-207ENST00000612273 BBS9Q3SYG4 887 aa14.86□□□□□ -0.03
COL6A1-207ENST00000612273 ANKRD35Q8N283 1001 aa14.86□□□□□ -0.03
COL6A1-207ENST00000612273 C12orf50Q8NA57 414 aaPredicted RBP14.86□□□□□ -0.03
COL6A1-207ENST00000612273 DEPTORQ8TB45 409 aa14.86□□□□□ -0.03
COL6A1-207ENST00000612273 MFSD14AQ96MC6 490 aa14.86□□□□□ -0.03
COL6A1-207ENST00000612273 HAPLN2Q9GZV7 340 aa14.86□□□□□ -0.03
COL6A1-207ENST00000612273 COQ4Q9Y3A0 265 aa14.86□□□□□ -0.03
COL6A1-207ENST00000612273 KAT6AQ92794 2004 aa14.86□□□□□ -0.03
COL6A1-207ENST00000612273 SIPA1L1O43166 1804 aa14.86□□□□□ -0.03
COL6A1-207ENST00000612273 C2orf71A6NGG8 1288 aa14.86□□□□□ -0.03
COL6A1-207ENST00000612273 KRT4P19013 534 aa14.86□□□□□ -0.03
COL6A1-207ENST00000612273 NOMO3P69849 1222 aa14.86□□□□□ -0.03
COL6A1-207ENST00000612273 FSTL1Q12841 308 aa14.86□□□□□ -0.03
COL6A1-207ENST00000612273 CUL2Q13617 745 aa14.86□□□□□ -0.03
COL6A1-207ENST00000612273 SETDB1Q15047 1291 aa14.86□□□□□ -0.03
COL6A1-207ENST00000612273 SPDYE2Q495Y8 402 aa14.86□□□□□ -0.03
COL6A1-207ENST00000612273 TNFAIP8L3Q5GJ75 292 aa14.86□□□□□ -0.03
COL6A1-207ENST00000612273 MON1BQ7L1V2 547 aa14.86□□□□□ -0.03
COL6A1-207ENST00000612273 ANKLE1Q8NAG6 615 aa14.86□□□□□ -0.03
COL6A1-207ENST00000612273 LRRC8CQ8TDW0 803 aa14.86□□□□□ -0.03
COL6A1-207ENST00000612273 SMC6Q96SB8 1091 aa14.86□□□□□ -0.03
COL6A1-207ENST00000612273 PLCD4Q9BRC7 762 aa14.86□□□□□ -0.03
COL6A1-207ENST00000612273 A1CFQ9NQ94 594 aaKnown RBP14.86□□□□□ -0.03
COL6A1-207ENST00000612273 A0A0G2JND7 137 aa14.85□□□□□ -0.03
COL6A1-207ENST00000612273 ZBED4O75132 1171 aa14.85□□□□□ -0.03
COL6A1-207ENST00000612273 SRGAP2CP0DJJ0 459 aa14.85□□□□□ -0.03
COL6A1-207ENST00000612273 KRT76Q01546 638 aa14.85□□□□□ -0.03
COL6A1-207ENST00000612273 FBF1Q8TES7 1133 aa14.85□□□□□ -0.03
COL6A1-207ENST00000612273 VTI1AQ96AJ9 217 aa14.85□□□□□ -0.03
COL6A1-207ENST00000612273 ZBTB10Q96DT7 871 aa14.85□□□□□ -0.03
COL6A1-207ENST00000612273 LRRC37BQ96QE4 947 aa14.85□□□□□ -0.03
COL6A1-207ENST00000612273 RXFP1Q9HBX9 757 aa14.85□□□□□ -0.03
COL6A1-207ENST00000612273 GSTA1P08263 222 aa14.85□□□□□ -0.03
COL6A1-207ENST00000612273 CETN2P41208 172 aa14.85□□□□□ -0.03
COL6A1-207ENST00000612273 JAK3P52333 1124 aa14.85□□□□□ -0.03
COL6A1-207ENST00000612273 ATP11AP98196 1134 aa14.85□□□□□ -0.03
COL6A1-207ENST00000612273 TFDP1Q14186 410 aa14.85□□□□□ -0.03
COL6A1-207ENST00000612273 CCNG2Q16589 344 aa14.85□□□□□ -0.03
COL6A1-207ENST00000612273 ZNF606Q8WXB4 792 aa14.85□□□□□ -0.03
COL6A1-207ENST00000612273 SLC38A10Q9HBR0 1119 aa14.85□□□□□ -0.03
COL6A1-207ENST00000612273 UBN1Q9NPG3 1134 aa14.85□□□□□ -0.03
COL6A1-207ENST00000612273 CYP26B1Q9NR63 512 aa14.85□□□□□ -0.03
COL6A1-207ENST00000612273 CSDE1O75534 798 aaKnown RBP14.84□□□□□ -0.03
COL6A1-207ENST00000612273 KRT19P08727 400 aa14.84□□□□□ -0.03
COL6A1-207ENST00000612273 GCLCP48506 637 aaPredicted RBP14.84□□□□□ -0.03
COL6A1-207ENST00000612273 HMGCS2P54868 508 aa14.84□□□□□ -0.03
COL6A1-207ENST00000612273 ACTR2P61160 394 aa14.84□□□□□ -0.03
COL6A1-207ENST00000612273 TFAMQ00059 246 aaKnown RBP14.84□□□□□ -0.03
COL6A1-207ENST00000612273 OGDHQ02218 1023 aa14.84□□□□□ -0.03
COL6A1-207ENST00000612273 GCNT1Q02742 428 aa14.84□□□□□ -0.03
COL6A1-207ENST00000612273 LVRNQ6Q4G3 990 aa14.84□□□□□ -0.03
COL6A1-207ENST00000612273 SAMD7Q7Z3H4 446 aa14.84□□□□□ -0.03
COL6A1-207ENST00000612273 ABRAQ8N0Z2 381 aa14.84□□□□□ -0.03
COL6A1-207ENST00000612273 CCDC33Q8N5R6 958 aa14.84□□□□□ -0.03
COL6A1-207ENST00000612273 ATP6V0A1Q93050 837 aa14.84□□□□□ -0.03
COL6A1-207ENST00000612273 KIAA1683Q9H0B3 1180 aa14.84□□□□□ -0.03
COL6A1-207ENST00000612273 NKX1-2Q9UD57 310 aaPredicted RBP14.84□□□□□ -0.03
COL6A1-207ENST00000612273 ZMYND8Q9ULU4 1186 aaPredicted RBP14.84□□□□□ -0.03
COL6A1-207ENST00000612273 CFAP73A6NFT4 308 aa14.84□□□□□ -0.03
COL6A1-207ENST00000612273 NPM3O75607 178 aaKnown RBP14.84□□□□□ -0.03
COL6A1-207ENST00000612273 ADRA1DP25100 572 aa14.84□□□□□ -0.03
COL6A1-207ENST00000612273 EPHB2P29323 1055 aa14.84□□□□□ -0.03
COL6A1-207ENST00000612273 KLF1Q13351 362 aaPredicted RBP14.84□□□□□ -0.03
COL6A1-207ENST00000612273 NCOA4Q13772 614 aa14.84□□□□□ -0.03
COL6A1-207ENST00000612273 ANKRD22Q5VYY1 191 aa14.84□□□□□ -0.03
COL6A1-207ENST00000612273 DNAJC24Q6P3W2 148 aa14.84□□□□□ -0.03
COL6A1-207ENST00000612273 RHPN2Q8IUC4 686 aa14.84□□□□□ -0.03
COL6A1-207ENST00000612273 FEZF2Q8TBJ5 459 aa14.84□□□□□ -0.03
COL6A1-207ENST00000612273 TMC2Q8TDI7 906 aa14.84□□□□□ -0.03
COL6A1-207ENST00000612273 ASAP3Q8TDY4 903 aa14.84□□□□□ -0.03
COL6A1-207ENST00000612273 MAGEB18Q96M61 343 aa14.84□□□□□ -0.03
COL6A1-207ENST00000612273 MTMR12Q9C0I1 747 aa14.84□□□□□ -0.03
COL6A1-207ENST00000612273 CCDC134Q9H6E4 229 aa14.84□□□□□ -0.03
COL6A1-207ENST00000612273 NOP53Q9NZM5 478 aaKnown RBP14.84□□□□□ -0.03
COL6A1-207ENST00000612273 ATAD5Q96QE3 1844 aa14.84□□□□□ -0.03
COL6A1-207ENST00000612273 FOCADQ5VW36 1801 aa14.84□□□□□ -0.03
COL6A1-207ENST00000612273 EDN1P05305 212 aa14.84□□□□□ -0.03
COL6A1-207ENST00000612273 FGFR1P11362 822 aa14.84□□□□□ -0.03
COL6A1-207ENST00000612273 GDF10P55107 478 aa14.84□□□□□ -0.03
COL6A1-207ENST00000612273 ZACNQ401N2 412 aa14.84□□□□□ -0.03
COL6A1-207ENST00000612273 THNSL1Q8IYQ7 743 aa14.84□□□□□ -0.03
COL6A1-207ENST00000612273 MAIP1Q8WWC4 291 aa14.84□□□□□ -0.03
COL6A1-207ENST00000612273 CFAP57Q96MR6 1250 aa14.84□□□□□ -0.03
COL6A1-207ENST00000612273 MAK16Q9BXY0 300 aaKnown RBP14.84□□□□□ -0.03
COL6A1-207ENST00000612273 ATP6V0A4Q9HBG4 840 aa14.84□□□□□ -0.03
COL6A1-207ENST00000612273 JPH1Q9HDC5 661 aaPredicted RBP14.84□□□□□ -0.03
COL6A1-207ENST00000612273 GINM1Q9NU53 330 aa14.84□□□□□ -0.03
COL6A1-207ENST00000612273 CHKBQ9Y259 395 aa14.84□□□□□ -0.03
COL6A1-207ENST00000612273 C15orf41Q9Y2V0 281 aa14.84□□□□□ -0.03
COL6A1-207ENST00000612273 A0A1B0GUA9 196 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms