RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 IPO7O95373 1038 aaKnown RBP8.67□□□□□ -1.02
TARDBP-213ENST00000611963 ABL1P00519 1130 aa8.67□□□□□ -1.02
TARDBP-213ENST00000611963 TIMP1P01033 207 aa8.67□□□□□ -1.02
TARDBP-213ENST00000611963 ITGA4P13612 1032 aa8.67□□□□□ -1.02
TARDBP-213ENST00000611963 ZSCAN20P17040 1043 aaPredicted RBP8.67□□□□□ -1.02
TARDBP-213ENST00000611963 ACO1P21399 889 aaKnown RBP8.67□□□□□ -1.02
TARDBP-213ENST00000611963 CLCN1P35523 988 aa8.67□□□□□ -1.02
TARDBP-213ENST00000611963 ARHGAP25P42331 645 aa8.67□□□□□ -1.02
TARDBP-213ENST00000611963 RAP1GAPP47736 663 aa8.67□□□□□ -1.02
TARDBP-213ENST00000611963 PRSS12P56730 875 aa8.67□□□□□ -1.02
TARDBP-213ENST00000611963 SPA17Q15506 151 aa8.67□□□□□ -1.02
TARDBP-213ENST00000611963 SLC18A3Q16572 532 aa8.67□□□□□ -1.02
TARDBP-213ENST00000611963 SGSM1Q2NKQ1 1148 aa8.67□□□□□ -1.02
TARDBP-213ENST00000611963 TAF3Q5VWG9 929 aa8.67□□□□□ -1.02
TARDBP-213ENST00000611963 NYAP1Q6ZVC0 841 aa8.67□□□□□ -1.02
TARDBP-213ENST00000611963 Q7L0L9 218 aa8.67□□□□□ -1.02
TARDBP-213ENST00000611963 LRRC8DQ7L1W4 858 aa8.67□□□□□ -1.02
TARDBP-213ENST00000611963 ENOSF1Q7L5Y1 443 aa8.67□□□□□ -1.02
TARDBP-213ENST00000611963 NOP9Q86U38 636 aaKnown RBP8.67□□□□□ -1.02
TARDBP-213ENST00000611963 SLC47A2Q86VL8 602 aa8.67□□□□□ -1.02
TARDBP-213ENST00000611963 CD302Q8IX05 232 aa8.67□□□□□ -1.02
TARDBP-213ENST00000611963 RNF169Q8NCN4 708 aa8.67□□□□□ -1.02
TARDBP-213ENST00000611963 BEST2Q8NFU1 509 aa8.67□□□□□ -1.02
TARDBP-213ENST00000611963 LNX1Q8TBB1 728 aaPredicted RBP8.67□□□□□ -1.02
TARDBP-213ENST00000611963 CAGE1Q8TC20 777 aa8.67□□□□□ -1.02
TARDBP-213ENST00000611963 LINC01599Q8WXQ3 324 aa8.67□□□□□ -1.02
TARDBP-213ENST00000611963 JAKMIP2Q96AA8 810 aa8.67□□□□□ -1.02
TARDBP-213ENST00000611963 ADAM2Q99965 735 aa8.67□□□□□ -1.02
TARDBP-213ENST00000611963 SYT11Q9BT88 431 aa8.67□□□□□ -1.02
TARDBP-213ENST00000611963 NIF3L1Q9GZT8 377 aa8.67□□□□□ -1.02
TARDBP-213ENST00000611963 SMYD3Q9H7B4 428 aa8.67□□□□□ -1.02
TARDBP-213ENST00000611963 CHST12Q9NRB3 414 aa8.67□□□□□ -1.02
TARDBP-213ENST00000611963 SEPT11Q9NVA2 429 aaKnown RBP8.67□□□□□ -1.02
TARDBP-213ENST00000611963 NXF1Q9UBU9 619 aaKnown RBP8.67□□□□□ -1.02
TARDBP-213ENST00000611963 ADAMTS1Q9UHI8 967 aa8.67□□□□□ -1.02
TARDBP-213ENST00000611963 ITGA11Q9UKX5 1188 aa8.67□□□□□ -1.02
TARDBP-213ENST00000611963 DERAQ9Y315 318 aa8.67□□□□□ -1.02
TARDBP-213ENST00000611963 PCDHA13Q9Y5I0 950 aa8.67□□□□□ -1.02
TARDBP-213ENST00000611963 BZW2Q9Y6E2 419 aaKnown RBP8.67□□□□□ -1.02
TARDBP-213ENST00000611963 SMIM28A0A1B0GU29 152 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 GOLGA6L9A6NEM1 432 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 TMCO5BA8MYB1 307 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 PTGESO14684 152 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 TLR3O15455 904 aaKnown RBP8.66□□□□□ -1.02
TARDBP-213ENST00000611963 LCA5LO95447 670 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 WEE2P0C1S8 567 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 CCDC172P0C7W6 258 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 TNNT1P13805 278 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 KCNE1P15382 129 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 SELPP16109 830 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 ATF7P17544 494 aaPredicted RBP8.66□□□□□ -1.02
TARDBP-213ENST00000611963 CHRNB2P17787 502 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 CD58P19256 250 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 TNFAIP3P21580 790 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 TBXAS1P24557 533 aaPredicted RBP8.66□□□□□ -1.02
TARDBP-213ENST00000611963 MLH1P40692 756 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 MAGEA1P43355 309 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 ASPAP45381 313 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 AFF1P51825 1210 aaKnown RBP8.66□□□□□ -1.02
TARDBP-213ENST00000611963 VAV2P52735 878 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 PTPN5P54829 565 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 KRT83P78385 493 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 RBP5P82980 135 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 FPGSQ05932 587 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 SOX4Q06945 474 aaPredicted RBP8.66□□□□□ -1.02
TARDBP-213ENST00000611963 BFSP2Q13515 415 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 PTPN14Q15678 1187 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 ZBTB6Q15916 424 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 XKR4Q5GH76 650 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 ZNF667Q5HYK9 610 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 DNTTIP2Q5QJE6 756 aaKnown RBP8.66□□□□□ -1.02
TARDBP-213ENST00000611963 MFSD5Q6N075 450 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 TMEM270Q6UE05 265 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 AGMOQ6ZNB7 445 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 C16orf59Q7L2K0 433 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 VPS36Q86VN1 386 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 PALB2Q86YC2 1186 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 NT5DC4Q86YG4 428 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 FMNL3Q8IVF7 1028 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 GLYCTKQ8IVS8 523 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 RPUSD2Q8IZ73 545 aaKnown RBP8.66□□□□□ -1.02
TARDBP-213ENST00000611963 UBR7Q8N806 425 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 RBBP8NLQ8NC74 664 aaPredicted RBP8.66□□□□□ -1.02
TARDBP-213ENST00000611963 EPS8L1Q8TE68 723 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 VWCEQ96DN2 955 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 HPDLQ96IR7 371 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 FAM81BQ96LP2 452 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 ZFP42Q96MM3 310 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 GAD1Q99259 594 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 AGPAT1Q99943 283 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 PACSIN1Q9BY11 444 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 SEZ6LQ9BYH1 1024 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 IFIH1Q9BYX4 1025 aaKnown RBP8.66□□□□□ -1.02
TARDBP-213ENST00000611963 IRX2Q9BZI1 471 aaPredicted RBP8.66□□□□□ -1.02
TARDBP-213ENST00000611963 PPP1R12CQ9BZL4 782 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 LACRTQ9GZZ8 138 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 SDCBP2Q9H190 292 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 GOLGA2P5Q9HBQ8 144 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 TAS2R14Q9NYV8 317 aa8.66□□□□□ -1.02
TARDBP-213ENST00000611963 CACNG4Q9UBN1 327 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms