RNA–Protein interactions for RNA: ENST00000611733.4

CLK4-215, Transcript of CDC like kinase 4, humanhuman

TSL 5 BASIC

Gene CLK4, Length 2,182 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-215ENST00000611733 NIF3L1Q9GZT8 377 aa12.93□□□□□ -0.34
CLK4-215ENST00000611733 TPM3P06753 285 aa12.92□□□□□ -0.34
CLK4-215ENST00000611733 CD58P19256 250 aa12.92□□□□□ -0.34
CLK4-215ENST00000611733 TKTP29401 623 aaKnown RBP12.92□□□□□ -0.34
CLK4-215ENST00000611733 TNNC1P63316 161 aa12.92□□□□□ -0.34
CLK4-215ENST00000611733 ORC1Q13415 861 aa12.92□□□□□ -0.34
CLK4-215ENST00000611733 FAM171A1Q5VUB5 890 aa12.92□□□□□ -0.34
CLK4-215ENST00000611733 SPECC1LQ69YQ0 1117 aa12.92□□□□□ -0.34
CLK4-215ENST00000611733 FUT10Q6P4F1 479 aa12.92□□□□□ -0.34
CLK4-215ENST00000611733 LIMS2Q7Z4I7 341 aa12.92□□□□□ -0.34
CLK4-215ENST00000611733 OSTM1Q86WC4 334 aa12.92□□□□□ -0.34
CLK4-215ENST00000611733 PDCL2Q8N4E4 241 aa12.92□□□□□ -0.34
CLK4-215ENST00000611733 SPC24Q8NBT2 197 aa12.92□□□□□ -0.34
CLK4-215ENST00000611733 CCDC150Q8NCX0 1101 aa12.92□□□□□ -0.34
CLK4-215ENST00000611733 KBTBD7Q8WVZ9 684 aa12.92□□□□□ -0.34
CLK4-215ENST00000611733 SUSD3Q96L08 255 aa12.92□□□□□ -0.34
CLK4-215ENST00000611733 BCO2Q9BYV7 579 aa12.92□□□□□ -0.34
CLK4-215ENST00000611733 GPR88Q9GZN0 384 aa12.92□□□□□ -0.34
CLK4-215ENST00000611733 ALG13Q9NP73 1137 aaKnown RBP12.92□□□□□ -0.34
CLK4-215ENST00000611733 SPG21Q9NZD8 308 aa12.92□□□□□ -0.34
CLK4-215ENST00000611733 CHD9Q3L8U1 2897 aa12.92□□□□□ -0.34
CLK4-215ENST00000611733 GBF1Q92538 1859 aa12.92□□□□□ -0.34
CLK4-215ENST00000611733 M0QZQ0 153 aa12.91□□□□□ -0.34
CLK4-215ENST00000611733 FGF18O76093 207 aa12.91□□□□□ -0.34
CLK4-215ENST00000611733 GYPCP04921 128 aa12.91□□□□□ -0.34
CLK4-215ENST00000611733 TRIM21P19474 475 aaKnown RBP12.91□□□□□ -0.34
CLK4-215ENST00000611733 ACO1P21399 889 aaKnown RBP12.91□□□□□ -0.34
CLK4-215ENST00000611733 LMO2P25791 158 aa12.91□□□□□ -0.34
CLK4-215ENST00000611733 CTNNB1P35222 781 aa12.91□□□□□ -0.34
CLK4-215ENST00000611733 FXR1P51114 621 aaKnown RBP eCLIP12.91□□□□□ -0.34
CLK4-215ENST00000611733 RAPGEF1Q13905 1077 aa12.91□□□□□ -0.34
CLK4-215ENST00000611733 CEP57Q86XR8 500 aa12.91□□□□□ -0.34
CLK4-215ENST00000611733 LPIN3Q9BQK8 851 aa12.91□□□□□ -0.34
CLK4-215ENST00000611733 HMGXB4Q9UGU5 601 aa12.91□□□□□ -0.34
CLK4-215ENST00000611733 PCDHB12Q9Y5F1 795 aa12.91□□□□□ -0.34
CLK4-215ENST00000611733 FOXN3O00409 490 aaPredicted RBP12.91□□□□□ -0.34
CLK4-215ENST00000611733 CSPG5O95196 566 aa12.91□□□□□ -0.34
CLK4-215ENST00000611733 CASP14P31944 242 aa12.91□□□□□ -0.34
CLK4-215ENST00000611733 TBX2Q13207 712 aaPredicted RBP12.91□□□□□ -0.34
CLK4-215ENST00000611733 DRAP1Q14919 205 aaPredicted RBP12.91□□□□□ -0.34
CLK4-215ENST00000611733 RTP2Q5QGT7 225 aa12.91□□□□□ -0.34
CLK4-215ENST00000611733 UBR7Q8N806 425 aa12.91□□□□□ -0.34
CLK4-215ENST00000611733 WHAMMQ8TF30 809 aa12.91□□□□□ -0.34
CLK4-215ENST00000611733 BAP1Q92560 729 aa12.91□□□□□ -0.34
CLK4-215ENST00000611733 TWNKQ96RR1 684 aa12.91□□□□□ -0.34
CLK4-215ENST00000611733 ACP6Q9NPH0 428 aa12.91□□□□□ -0.34
CLK4-215ENST00000611733 CISHQ9NSE2 258 aa12.91□□□□□ -0.34
CLK4-215ENST00000611733 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.91□□□□□ -0.34
CLK4-215ENST00000611733 KIAA1671Q9BY89 1806 aa12.9□□□□□ -0.34
CLK4-215ENST00000611733 HUS1O60921 280 aa12.9□□□□□ -0.34
CLK4-215ENST00000611733 PDGFRBP09619 1106 aa12.9□□□□□ -0.34
CLK4-215ENST00000611733 DNAJB1P25685 340 aa12.9□□□□□ -0.34
CLK4-215ENST00000611733 GCNT1Q02742 428 aa12.9□□□□□ -0.34
CLK4-215ENST00000611733 CCDC142Q17RM4 750 aa12.9□□□□□ -0.34
CLK4-215ENST00000611733 ZNF394Q53GI3 561 aa12.9□□□□□ -0.34
CLK4-215ENST00000611733 RNF168Q8IYW5 571 aaPredicted RBP12.9□□□□□ -0.34
CLK4-215ENST00000611733 APPL2Q8NEU8 664 aa12.9□□□□□ -0.34
CLK4-215ENST00000611733 AUTS2Q8WXX7 1259 aa12.9□□□□□ -0.34
CLK4-215ENST00000611733 TMEM169Q96HH4 297 aa12.9□□□□□ -0.34
CLK4-215ENST00000611733 RTP3Q9BQQ7 232 aa12.9□□□□□ -0.34
CLK4-215ENST00000611733 AAASQ9NRG9 546 aa12.9□□□□□ -0.34
CLK4-215ENST00000611733 MSRAQ9UJ68 235 aa12.9□□□□□ -0.34
CLK4-215ENST00000611733 ITIH6Q6UXX5 1313 aa12.9□□□□□ -0.34
CLK4-215ENST00000611733 EPOPA6NHQ4 379 aa12.9□□□□□ -0.34
CLK4-215ENST00000611733 ACAT1P24752 427 aaKnown RBP12.9□□□□□ -0.34
CLK4-215ENST00000611733 DNAJB2P25686 324 aa12.9□□□□□ -0.34
CLK4-215ENST00000611733 MFAP3P55082 362 aa12.9□□□□□ -0.34
CLK4-215ENST00000611733 ADKP55263 362 aaKnown RBP12.9□□□□□ -0.34
CLK4-215ENST00000611733 KIAA0319Q5VV43 1072 aa12.9□□□□□ -0.34
CLK4-215ENST00000611733 E4F1Q66K89 784 aaPredicted RBP12.9□□□□□ -0.34
CLK4-215ENST00000611733 PRSS55Q6UWB4 352 aaPredicted RBP12.9□□□□□ -0.34
CLK4-215ENST00000611733 DRC7Q8IY82 874 aa12.9□□□□□ -0.34
CLK4-215ENST00000611733 ADGRF2Q8IZF7 708 aa12.9□□□□□ -0.34
CLK4-215ENST00000611733 TOP6BLQ8N6T0 577 aa12.9□□□□□ -0.34
CLK4-215ENST00000611733 TMEM209Q96SK2 561 aa12.9□□□□□ -0.34
CLK4-215ENST00000611733 DPEP3Q9H4B8 488 aa12.9□□□□□ -0.34
CLK4-215ENST00000611733 PCDHB8Q9UN66 801 aa12.9□□□□□ -0.34
CLK4-215ENST00000611733 CHD7Q9P2D1 2997 aa12.9□□□□□ -0.35
CLK4-215ENST00000611733 RFXAPO00287 272 aa12.89□□□□□ -0.35
CLK4-215ENST00000611733 ATP2C2O75185 946 aa12.89□□□□□ -0.35
CLK4-215ENST00000611733 FGFR3P22607 806 aa12.89□□□□□ -0.35
CLK4-215ENST00000611733 USP8P40818 1118 aa12.89□□□□□ -0.35
CLK4-215ENST00000611733 NDST1P52848 882 aa12.89□□□□□ -0.35
CLK4-215ENST00000611733 JAM2P57087 298 aa12.89□□□□□ -0.35
CLK4-215ENST00000611733 ERVK-21P61565 698 aa12.89□□□□□ -0.35
CLK4-215ENST00000611733 ARID5BQ14865 1188 aa12.89□□□□□ -0.35
CLK4-215ENST00000611733 PPP2R2DQ66LE6 453 aa12.89□□□□□ -0.35
CLK4-215ENST00000611733 RSPO2Q6UXX9 243 aaPredicted RBP12.89□□□□□ -0.35
CLK4-215ENST00000611733 DDX53Q86TM3 631 aaKnown RBP12.89□□□□□ -0.35
CLK4-215ENST00000611733 OR6B3Q8NGW1 331 aa12.89□□□□□ -0.35
CLK4-215ENST00000611733 SPPL3Q8TCT6 385 aa12.89□□□□□ -0.35
CLK4-215ENST00000611733 TGS1Q96RS0 853 aaKnown RBP12.89□□□□□ -0.35
CLK4-215ENST00000611733 STK33Q9BYT3 514 aa12.89□□□□□ -0.35
CLK4-215ENST00000611733 ELOVL4Q9GZR5 314 aa12.89□□□□□ -0.35
CLK4-215ENST00000611733 CEP72Q9P209 647 aa12.89□□□□□ -0.35
CLK4-215ENST00000611733 CAPN11Q9UMQ6 739 aa12.89□□□□□ -0.35
CLK4-215ENST00000611733 PCDHB4Q9Y5E5 795 aa12.89□□□□□ -0.35
CLK4-215ENST00000611733 PCDHGC5Q9Y5F6 944 aa12.89□□□□□ -0.35
CLK4-215ENST00000611733 SF3B1O75533 1304 aaKnown RBP eCLIP12.89□□□□□ -0.355e-7■■■■■ 98.4
CLK4-215ENST00000611733 C2CD2LO14523 706 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms