RNA–Protein interactions for RNA: ENST00000611205.4

CDKN3-211, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKN3, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-211ENST00000611205 GPR17Q13304 367 aa26.48■■□□□ 1.83
CDKN3-211ENST00000611205 RSPO4Q2I0M5 234 aaPredicted RBP26.48■■□□□ 1.83
CDKN3-211ENST00000611205 YAF2Q8IY57 180 aa26.48■■□□□ 1.83
CDKN3-211ENST00000611205 ZNF687Q8N1G0 1237 aa26.48■■□□□ 1.83
CDKN3-211ENST00000611205 DNAJC25Q9H1X3 360 aa26.48■■□□□ 1.83
CDKN3-211ENST00000611205 ZHX3Q9H4I2 956 aa26.48■■□□□ 1.83
CDKN3-211ENST00000611205 CACNA1AO00555 2505 aa26.48■■□□□ 1.83
CDKN3-211ENST00000611205 DMXL1Q9Y485 3027 aa26.47■■□□□ 1.83
CDKN3-211ENST00000611205 KRT18P05783 430 aaKnown RBP26.47■■□□□ 1.83
CDKN3-211ENST00000611205 CCNE1P24864 410 aa26.47■■□□□ 1.83
CDKN3-211ENST00000611205 UBA7P41226 1012 aa26.47■■□□□ 1.83
CDKN3-211ENST00000611205 TMC8Q8IU68 726 aa26.47■■□□□ 1.83
CDKN3-211ENST00000611205 GPIHBP1Q8IV16 184 aa26.47■■□□□ 1.83
CDKN3-211ENST00000611205 CSGALNACT1Q8TDX6 532 aa26.47■■□□□ 1.83
CDKN3-211ENST00000611205 TMX3Q96JJ7 454 aa26.47■■□□□ 1.83
CDKN3-211ENST00000611205 AK8Q96MA6 479 aa26.47■■□□□ 1.83
CDKN3-211ENST00000611205 MSTO1Q9BUK6 570 aa26.47■■□□□ 1.83
CDKN3-211ENST00000611205 LRRC3Q9BY71 257 aa26.47■■□□□ 1.83
CDKN3-211ENST00000611205 SCN1AP35498 2009 aa26.47■■□□□ 1.83
CDKN3-211ENST00000611205 CEP250Q9BV73 2442 aa26.47■■□□□ 1.83
CDKN3-211ENST00000611205 MTMR11A4FU01 709 aa26.46■■□□□ 1.83
CDKN3-211ENST00000611205 FAM189A1O60320 539 aa26.46■■□□□ 1.83
CDKN3-211ENST00000611205 PIGRP01833 764 aa26.46■■□□□ 1.83
CDKN3-211ENST00000611205 ODC1P11926 461 aa26.46■■□□□ 1.83
CDKN3-211ENST00000611205 TYMPP19971 482 aa26.46■■□□□ 1.83
CDKN3-211ENST00000611205 PPP2R5DQ14738 602 aa26.46■■□□□ 1.83
CDKN3-211ENST00000611205 STXBP5Q5T5C0 1151 aa26.46■■□□□ 1.83
CDKN3-211ENST00000611205 SPATA1Q5VX52 437 aa26.46■■□□□ 1.83
CDKN3-211ENST00000611205 JADE1Q6IE81 842 aa26.46■■□□□ 1.83
CDKN3-211ENST00000611205 CENPPQ6IPU0 288 aa26.46■■□□□ 1.83
CDKN3-211ENST00000611205 RASSF8Q8NHQ8 419 aa26.46■■□□□ 1.83
CDKN3-211ENST00000611205 LRRC15Q8TF66 581 aa26.46■■□□□ 1.83
CDKN3-211ENST00000611205 E2F7Q96AV8 911 aa26.46■■□□□ 1.83
CDKN3-211ENST00000611205 TMEM209Q96SK2 561 aa26.46■■□□□ 1.83
CDKN3-211ENST00000611205 FAM126AQ9BYI3 521 aaPredicted RBP26.46■■□□□ 1.83
CDKN3-211ENST00000611205 PARVGQ9HBI0 331 aa26.46■■□□□ 1.83
CDKN3-211ENST00000611205 DLL3Q9NYJ7 618 aa26.46■■□□□ 1.83
CDKN3-211ENST00000611205 KIF26AQ9ULI4 1882 aaPredicted RBP26.46■■□□□ 1.83
CDKN3-211ENST00000611205 TRAK2O60296 914 aa26.45■■□□□ 1.82
CDKN3-211ENST00000611205 LILRA4P59901 499 aa26.45■■□□□ 1.82
CDKN3-211ENST00000611205 MYBPC2Q14324 1141 aa26.45■■□□□ 1.82
CDKN3-211ENST00000611205 MCM6Q14566 821 aa26.45■■□□□ 1.82
CDKN3-211ENST00000611205 ARMCX5Q6P1M9 558 aa26.45■■□□□ 1.82
CDKN3-211ENST00000611205 TTC9BQ8N6N2 239 aa26.45■■□□□ 1.82
CDKN3-211ENST00000611205 ATAD1Q8NBU5 361 aa26.45■■□□□ 1.82
CDKN3-211ENST00000611205 KCNN1Q92952 543 aa26.45■■□□□ 1.82
CDKN3-211ENST00000611205 RSPRY1Q96DX4 576 aa26.45■■□□□ 1.82
CDKN3-211ENST00000611205 SENP8Q96LD8 212 aa26.45■■□□□ 1.82
CDKN3-211ENST00000611205 TSPAN18Q96SJ8 248 aa26.45■■□□□ 1.82
CDKN3-211ENST00000611205 IER2Q9BTL4 223 aa26.45■■□□□ 1.82
CDKN3-211ENST00000611205 SLC26A4O43511 780 aa26.44■■□□□ 1.82
CDKN3-211ENST00000611205 SOAT2O75908 522 aa26.44■■□□□ 1.82
CDKN3-211ENST00000611205 CCR3P51677 355 aa26.44■■□□□ 1.82
CDKN3-211ENST00000611205 NRLP54845 237 aa26.44■■□□□ 1.82
CDKN3-211ENST00000611205 CD302Q8IX05 232 aa26.44■■□□□ 1.82
CDKN3-211ENST00000611205 GPR161Q8N6U8 529 aaKnown RBP26.44■■□□□ 1.82
CDKN3-211ENST00000611205 BLOC1S4Q9NUP1 217 aa26.44■■□□□ 1.82
CDKN3-211ENST00000611205 CPSF3Q9UKF6 684 aaKnown RBP26.44■■□□□ 1.82
CDKN3-211ENST00000611205 A0A0B4J269 797 aa26.43■■□□□ 1.82
CDKN3-211ENST00000611205 SLC38A8A6NNN8 435 aa26.43■■□□□ 1.82
CDKN3-211ENST00000611205 ARNTLO00327 626 aa26.43■■□□□ 1.82
CDKN3-211ENST00000611205 CHADO15335 359 aa26.43■■□□□ 1.82
CDKN3-211ENST00000611205 TBCAO75347 108 aaKnown RBP26.43■■□□□ 1.82
CDKN3-211ENST00000611205 ADRB2P07550 413 aa26.43■■□□□ 1.82
CDKN3-211ENST00000611205 NFICP08651 508 aa26.43■■□□□ 1.82
CDKN3-211ENST00000611205 PLCG1P19174 1290 aa26.43■■□□□ 1.82
CDKN3-211ENST00000611205 SCP2P22307 547 aa26.43■■□□□ 1.82
CDKN3-211ENST00000611205 KPNA1P52294 538 aaPredicted RBP26.43■■□□□ 1.82
CDKN3-211ENST00000611205 ZNF131P52739 623 aa26.43■■□□□ 1.82
CDKN3-211ENST00000611205 KARSQ15046 597 aaKnown RBP26.43■■□□□ 1.82
CDKN3-211ENST00000611205 C9orf57Q5W0N0 161 aa26.43■■□□□ 1.82
CDKN3-211ENST00000611205 SLC39A4Q6P5W5 647 aa26.43■■□□□ 1.82
CDKN3-211ENST00000611205 DNAJB7Q7Z6W7 309 aaPredicted RBP26.43■■□□□ 1.82
CDKN3-211ENST00000611205 ARID3BQ8IVW6 561 aaPredicted RBP26.43■■□□□ 1.82
CDKN3-211ENST00000611205 ATXN3LQ9H3M9 355 aa26.43■■□□□ 1.82
CDKN3-211ENST00000611205 GMEB2Q9UKD1 530 aa26.43■■□□□ 1.82
CDKN3-211ENST00000611205 USP18Q9UMW8 372 aa26.43■■□□□ 1.82
CDKN3-211ENST00000611205 SMC3Q9UQE7 1217 aa26.43■■□□□ 1.82
CDKN3-211ENST00000611205 DPYSL4O14531 572 aa26.42■■□□□ 1.82
CDKN3-211ENST00000611205 CD2BP2O95400 341 aaKnown RBP26.42■■□□□ 1.82
CDKN3-211ENST00000611205 CHRNB1P11230 501 aa26.42■■□□□ 1.82
CDKN3-211ENST00000611205 TDGF1P13385 188 aa26.42■■□□□ 1.82
CDKN3-211ENST00000611205 NMT1P30419 496 aaKnown RBP26.42■■□□□ 1.82
CDKN3-211ENST00000611205 SOX9P48436 509 aa26.42■■□□□ 1.82
CDKN3-211ENST00000611205 CDR1P51861 262 aa26.42■■□□□ 1.82
CDKN3-211ENST00000611205 TMEM132DQ14C87 1099 aa26.42■■□□□ 1.82
CDKN3-211ENST00000611205 LPAL2Q16609 132 aa26.42■■□□□ 1.82
CDKN3-211ENST00000611205 FAM200AQ8TCP9 573 aa26.42■■□□□ 1.82
CDKN3-211ENST00000611205 RAD54LQ92698 747 aa26.42■■□□□ 1.82
CDKN3-211ENST00000611205 PSMG2Q969U7 264 aa26.42■■□□□ 1.82
CDKN3-211ENST00000611205 RAB23Q9ULC3 237 aa26.42■■□□□ 1.82
CDKN3-211ENST00000611205 ASB3Q9Y575 518 aa26.42■■□□□ 1.82
CDKN3-211ENST00000611205 FRYLO94915 3013 aa26.42■■□□□ 1.82
CDKN3-211ENST00000611205 ZNF638Q14966 1978 aaKnown RBP26.42■■□□□ 1.82
CDKN3-211ENST00000611205 GABRR2P28476 465 aa26.41■■□□□ 1.82
CDKN3-211ENST00000611205 ACOT2P49753 483 aa26.41■■□□□ 1.82
CDKN3-211ENST00000611205 GRIN1Q05586 938 aa26.41■■□□□ 1.82
CDKN3-211ENST00000611205 FCHO2Q0JRZ9 810 aa26.41■■□□□ 1.82
CDKN3-211ENST00000611205 SLC39A12Q504Y0 691 aa26.41■■□□□ 1.82
CDKN3-211ENST00000611205 GPR158Q5T848 1215 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms