RNA–Protein interactions for RNA: ENST00000610970.1

HOXA4-204, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-204ENST00000610970 CNOT10Q9H9A5 744 aaKnown RBP25.27■■□□□ 1.64
HOXA4-204ENST00000610970 RPF1Q9H9Y2 349 aaKnown RBP25.27■■□□□ 1.64
HOXA4-204ENST00000610970 COL1A2P08123 1366 aa25.27■■□□□ 1.64
HOXA4-204ENST00000610970 TMEM191CA6NGB0 347 aa25.26■■□□□ 1.63
HOXA4-204ENST00000610970 EPHX2P34913 555 aa25.26■■□□□ 1.63
HOXA4-204ENST00000610970 TFAMQ00059 246 aaKnown RBP25.26■■□□□ 1.63
HOXA4-204ENST00000610970 KRT17Q04695 432 aa25.26■■□□□ 1.63
HOXA4-204ENST00000610970 KLF1Q13351 362 aaPredicted RBP25.26■■□□□ 1.63
HOXA4-204ENST00000610970 BYSLQ13895 437 aaKnown RBP25.26■■□□□ 1.63
HOXA4-204ENST00000610970 WDR78Q5VTH9 848 aa25.26■■□□□ 1.63
HOXA4-204ENST00000610970 FOXR1Q6PIV2 292 aa25.26■■□□□ 1.63
HOXA4-204ENST00000610970 SRLQ86TD4 932 aa25.26■■□□□ 1.63
HOXA4-204ENST00000610970 SPATS2Q86XZ4 545 aaKnown RBP25.26■■□□□ 1.63
HOXA4-204ENST00000610970 RCOR2Q8IZ40 523 aa25.26■■□□□ 1.63
HOXA4-204ENST00000610970 BBOF1Q8ND07 529 aa25.26■■□□□ 1.63
HOXA4-204ENST00000610970 TLCD1Q96CP7 247 aa25.26■■□□□ 1.63
HOXA4-204ENST00000610970 RBM41Q96IZ5 413 aaKnown RBP25.26■■□□□ 1.63
HOXA4-204ENST00000610970 NLRP4Q96MN2 994 aa25.26■■□□□ 1.63
HOXA4-204ENST00000610970 VTA1Q9NP79 307 aa25.26■■□□□ 1.63
HOXA4-204ENST00000610970 EBAG9O00559 213 aa25.26■■□□□ 1.63
HOXA4-204ENST00000610970 MED7O43513 233 aa25.26■■□□□ 1.63
HOXA4-204ENST00000610970 C22orf31O95567 290 aa25.26■■□□□ 1.63
HOXA4-204ENST00000610970 KCNJ1P48048 391 aa25.26■■□□□ 1.63
HOXA4-204ENST00000610970 ADCY2Q08462 1091 aa25.26■■□□□ 1.63
HOXA4-204ENST00000610970 TMEM132AQ24JP5 1023 aa25.26■■□□□ 1.63
HOXA4-204ENST00000610970 ODF2Q5BJF6 829 aa25.26■■□□□ 1.63
HOXA4-204ENST00000610970 C6orf118Q5T5N4 469 aa25.26■■□□□ 1.63
HOXA4-204ENST00000610970 C3orf20Q8ND61 904 aa25.26■■□□□ 1.63
HOXA4-204ENST00000610970 C1orf54Q8WWF1 131 aa25.26■■□□□ 1.63
HOXA4-204ENST00000610970 SNF8Q96H20 258 aa25.26■■□□□ 1.63
HOXA4-204ENST00000610970 XYLT2Q9H1B5 865 aa25.26■■□□□ 1.63
HOXA4-204ENST00000610970 STRIP2Q9ULQ0 834 aa25.26■■□□□ 1.63
HOXA4-204ENST00000610970 PTPN22Q9Y2R2 807 aa25.26■■□□□ 1.63
HOXA4-204ENST00000610970 SLC45A1Q9Y2W3 748 aa25.26■■□□□ 1.63
HOXA4-204ENST00000610970 ZSWIM8A7E2V4 1837 aa25.25■■□□□ 1.63
HOXA4-204ENST00000610970 RBM47A0AV96 593 aaKnown RBP25.25■■□□□ 1.63
HOXA4-204ENST00000610970 GLTPD2A6NH11 291 aa25.25■■□□□ 1.63
HOXA4-204ENST00000610970 GH1P01241 217 aa25.25■■□□□ 1.63
HOXA4-204ENST00000610970 MCF2P10911 925 aa25.25■■□□□ 1.63
HOXA4-204ENST00000610970 COPS2P61201 443 aa25.25■■□□□ 1.63
HOXA4-204ENST00000610970 LMNB2Q03252 620 aa25.25■■□□□ 1.63
HOXA4-204ENST00000610970 PTGISQ16647 500 aa25.25■■□□□ 1.63
HOXA4-204ENST00000610970 B4GALNT4Q76KP1 1039 aa25.25■■□□□ 1.63
HOXA4-204ENST00000610970 ARMCX2Q7L311 632 aa25.25■■□□□ 1.63
HOXA4-204ENST00000610970 COPS5Q92905 334 aa25.25■■□□□ 1.63
HOXA4-204ENST00000610970 OSBPL8Q9BZF1 889 aa25.25■■□□□ 1.63
HOXA4-204ENST00000610970 STMN4Q9H169 189 aaPredicted RBP25.25■■□□□ 1.63
HOXA4-204ENST00000610970 CDT1Q9H211 546 aa25.25■■□□□ 1.63
HOXA4-204ENST00000610970 BCCIPQ9P287 314 aaKnown RBP eCLIP25.25■■□□□ 1.63
HOXA4-204ENST00000610970 NOVA2Q9UNW9 492 aaKnown RBP25.25■■□□□ 1.63
HOXA4-204ENST00000610970 RRP15Q9Y3B9 282 aaKnown RBP25.25■■□□□ 1.63
HOXA4-204ENST00000610970 TCRBV5S1A1TA0A578 114 aa25.24■■□□□ 1.63
HOXA4-204ENST00000610970 ARHGAP1Q07960 439 aa25.24■■□□□ 1.63
HOXA4-204ENST00000610970 PIGHQ14442 188 aaPredicted RBP25.24■■□□□ 1.63
HOXA4-204ENST00000610970 PHLDB2Q86SQ0 1253 aa25.24■■□□□ 1.63
HOXA4-204ENST00000610970 CCDC50Q8IVM0 306 aa25.24■■□□□ 1.63
HOXA4-204ENST00000610970 THNSL1Q8IYQ7 743 aa25.24■■□□□ 1.63
HOXA4-204ENST00000610970 GPRC5AQ8NFJ5 357 aa25.24■■□□□ 1.63
HOXA4-204ENST00000610970 EMID1Q96A84 441 aaPredicted RBP25.24■■□□□ 1.63
HOXA4-204ENST00000610970 RNF25Q96BH1 459 aaPredicted RBP25.24■■□□□ 1.63
HOXA4-204ENST00000610970 LHX5Q9H2C1 402 aa25.24■■□□□ 1.63
HOXA4-204ENST00000610970 SLC12A6Q9UHW9 1150 aa25.24■■□□□ 1.63
HOXA4-204ENST00000610970 TULP2O00295 520 aa25.23■■□□□ 1.63
HOXA4-204ENST00000610970 PAEPP09466 180 aa25.23■■□□□ 1.63
HOXA4-204ENST00000610970 POLR2BP30876 1174 aaKnown RBP25.23■■□□□ 1.63
HOXA4-204ENST00000610970 ASPAP45381 313 aa25.23■■□□□ 1.63
HOXA4-204ENST00000610970 TAS2R40P59535 323 aa25.23■■□□□ 1.63
HOXA4-204ENST00000610970 GUCY1A3Q02108 690 aa25.23■■□□□ 1.63
HOXA4-204ENST00000610970 ZNF792Q3KQV3 632 aa25.23■■□□□ 1.63
HOXA4-204ENST00000610970 C2CD6Q53TS8 623 aa25.23■■□□□ 1.63
HOXA4-204ENST00000610970 DNAJC24Q6P3W2 148 aa25.23■■□□□ 1.63
HOXA4-204ENST00000610970 ZNF467Q7Z7K2 595 aaPredicted RBP25.23■■□□□ 1.63
HOXA4-204ENST00000610970 NIPA2Q8N8Q9 360 aa25.23■■□□□ 1.63
HOXA4-204ENST00000610970 ROPN1BQ9BZX4 212 aaPredicted RBP25.23■■□□□ 1.63
HOXA4-204ENST00000610970 FAM124BQ9H5Z6 455 aaPredicted RBP25.23■■□□□ 1.63
HOXA4-204ENST00000610970 ROPN1Q9HAT0 212 aaPredicted RBP25.23■■□□□ 1.63
HOXA4-204ENST00000610970 CHST7Q9NS84 486 aa25.23■■□□□ 1.63
HOXA4-204ENST00000610970 ANK1P16157 1881 aa25.23■■□□□ 1.63
HOXA4-204ENST00000610970 RALAP11233 206 aa25.23■■□□□ 1.63
HOXA4-204ENST00000610970 CD58P19256 250 aa25.23■■□□□ 1.63
HOXA4-204ENST00000610970 ATICP31939 592 aa25.23■■□□□ 1.63
HOXA4-204ENST00000610970 HPDP32754 393 aaPredicted RBP25.23■■□□□ 1.63
HOXA4-204ENST00000610970 CLCN3P51790 818 aa25.23■■□□□ 1.63
HOXA4-204ENST00000610970 LLGL2Q6P1M3 1020 aa25.23■■□□□ 1.63
HOXA4-204ENST00000610970 RHBDF2Q6PJF5 856 aa25.23■■□□□ 1.63
HOXA4-204ENST00000610970 CEP128Q6ZU80 1094 aa25.23■■□□□ 1.63
HOXA4-204ENST00000610970 ERICH1Q86X53 443 aa25.23■■□□□ 1.63
HOXA4-204ENST00000610970 LINC01465Q8N7H1 131 aa25.23■■□□□ 1.63
HOXA4-204ENST00000610970 TRAPPC12Q8WVT3 735 aa25.23■■□□□ 1.63
HOXA4-204ENST00000610970 SLC10A4Q96EP9 437 aa25.23■■□□□ 1.63
HOXA4-204ENST00000610970 BCO2Q9BYV7 579 aa25.23■■□□□ 1.63
HOXA4-204ENST00000610970 ASB7Q9H672 318 aa25.23■■□□□ 1.63
HOXA4-204ENST00000610970 PDGFCQ9NRA1 345 aa25.23■■□□□ 1.63
HOXA4-204ENST00000610970 DDX56Q9NY93 547 aaKnown RBP25.23■■□□□ 1.63
HOXA4-204ENST00000610970 ASIC3Q9UHC3 531 aa25.23■■□□□ 1.63
HOXA4-204ENST00000610970 NDUFAB1O14561 156 aa25.22■■□□□ 1.63
HOXA4-204ENST00000610970 BRD2P25440 801 aaKnown RBP25.22■■□□□ 1.63
HOXA4-204ENST00000610970 PTPN7P35236 360 aa25.22■■□□□ 1.63
HOXA4-204ENST00000610970 CCT5P48643 541 aa25.22■■□□□ 1.63
HOXA4-204ENST00000610970 SLC29A2Q14542 456 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms