RNA–Protein interactions for RNA: ENST00000608657.5

ITGB5-212, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-212ENST00000608657 C11orf84Q9BUA3 381 aaPredicted RBP9.53□□□□□ -0.88
ITGB5-212ENST00000608657 NUP58Q9BVL2 599 aa9.53□□□□□ -0.88
ITGB5-212ENST00000608657 VPS16Q9H269 839 aa9.53□□□□□ -0.88
ITGB5-212ENST00000608657 NDST4Q9H3R1 872 aa9.53□□□□□ -0.88
ITGB5-212ENST00000608657 CERS4Q9HA82 394 aa9.53□□□□□ -0.88
ITGB5-212ENST00000608657 ZNHIT6Q9NWK9 470 aaKnown RBP9.53□□□□□ -0.88
ITGB5-212ENST00000608657 DNAI1Q9UI46 699 aa9.53□□□□□ -0.88
ITGB5-212ENST00000608657 SIX4Q9UIU6 781 aa9.53□□□□□ -0.88
ITGB5-212ENST00000608657 SF3B1O75533 1304 aaKnown RBP eCLIP9.53□□□□□ -0.88
ITGB5-212ENST00000608657 TMEM265A0A087WTH1 108 aa9.52□□□□□ -0.89
ITGB5-212ENST00000608657 ARHGEF37A1IGU5 675 aa9.52□□□□□ -0.89
ITGB5-212ENST00000608657 C5orf67F2Z3F1 127 aa9.52□□□□□ -0.89
ITGB5-212ENST00000608657 PMM2O15305 246 aa9.52□□□□□ -0.89
ITGB5-212ENST00000608657 FGF18O76093 207 aa9.52□□□□□ -0.89
ITGB5-212ENST00000608657 STAU1O95793 577 aaKnown RBP9.52□□□□□ -0.89
ITGB5-212ENST00000608657 CST3P01034 146 aaPredicted RBP9.52□□□□□ -0.89
ITGB5-212ENST00000608657 CASQ1P31415 396 aa9.52□□□□□ -0.89
ITGB5-212ENST00000608657 LILRA4P59901 499 aa9.52□□□□□ -0.89
ITGB5-212ENST00000608657 MYL6P60660 151 aa9.52□□□□□ -0.89
ITGB5-212ENST00000608657 TNNC1P63316 161 aa9.52□□□□□ -0.89
ITGB5-212ENST00000608657 RBM10P98175 930 aaKnown RBP9.52□□□□□ -0.89
ITGB5-212ENST00000608657 PLCB3Q01970 1234 aa9.52□□□□□ -0.89
ITGB5-212ENST00000608657 TBX2Q13207 712 aaPredicted RBP9.52□□□□□ -0.89
ITGB5-212ENST00000608657 GPM6BQ13491 265 aa9.52□□□□□ -0.89
ITGB5-212ENST00000608657 NR1I3Q14994 352 aa9.52□□□□□ -0.89
ITGB5-212ENST00000608657 SGSM1Q2NKQ1 1148 aa9.52□□□□□ -0.89
ITGB5-212ENST00000608657 ZNF667Q5HYK9 610 aa9.52□□□□□ -0.89
ITGB5-212ENST00000608657 WDR44Q5JSH3 913 aa9.52□□□□□ -0.89
ITGB5-212ENST00000608657 MIIPQ5JXC2 388 aa9.52□□□□□ -0.89
ITGB5-212ENST00000608657 GBP6Q6ZN66 633 aa9.52□□□□□ -0.89
ITGB5-212ENST00000608657 TMTC1Q8IUR5 882 aa9.52□□□□□ -0.89
ITGB5-212ENST00000608657 CXorf38Q8TB03 319 aa9.52□□□□□ -0.89
ITGB5-212ENST00000608657 BCL7CQ8WUZ0 217 aaPredicted RBP9.52□□□□□ -0.89
ITGB5-212ENST00000608657 RAB20Q9NX57 234 aa9.52□□□□□ -0.89
ITGB5-212ENST00000608657 GCNT4Q9P109 453 aa9.52□□□□□ -0.89
ITGB5-212ENST00000608657 MYO1AQ9UBC5 1043 aa9.52□□□□□ -0.89
ITGB5-212ENST00000608657 STK39Q9UEW8 545 aa9.52□□□□□ -0.89
ITGB5-212ENST00000608657 PUF60Q9UHX1 559 aaKnown RBP9.52□□□□□ -0.89
ITGB5-212ENST00000608657 COQ4Q9Y3A0 265 aa9.52□□□□□ -0.89
ITGB5-212ENST00000608657 ATG2AQ2TAZ0 1938 aa9.51□□□□□ -0.89
ITGB5-212ENST00000608657 A0A1W2PQC6 194 aa9.51□□□□□ -0.89
ITGB5-212ENST00000608657 GTPBP10A4D1E9 387 aaKnown RBP9.51□□□□□ -0.89
ITGB5-212ENST00000608657 LGALS16A8MUM7 142 aa9.51□□□□□ -0.89
ITGB5-212ENST00000608657 KPNA7A9QM74 516 aa9.51□□□□□ -0.89
ITGB5-212ENST00000608657 H3BNC9 293 aa9.51□□□□□ -0.89
ITGB5-212ENST00000608657 I3L4J1 428 aa9.51□□□□□ -0.89
ITGB5-212ENST00000608657 SOX1O00570 391 aaPredicted RBP9.51□□□□□ -0.89
ITGB5-212ENST00000608657 SPTLC1O15269 473 aa9.51□□□□□ -0.89
ITGB5-212ENST00000608657 KIF5CO60282 957 aa9.51□□□□□ -0.89
ITGB5-212ENST00000608657 HUS1O60921 280 aa9.51□□□□□ -0.89
ITGB5-212ENST00000608657 IPO7O95373 1038 aaKnown RBP9.51□□□□□ -0.89
ITGB5-212ENST00000608657 ASS1P00966 412 aaKnown RBP9.51□□□□□ -0.89
ITGB5-212ENST00000608657 SOD2P04179 222 aa9.51□□□□□ -0.89
ITGB5-212ENST00000608657 TUBBP07437 444 aa9.51□□□□□ -0.89
ITGB5-212ENST00000608657 ODC1P11926 461 aa9.51□□□□□ -0.89
ITGB5-212ENST00000608657 P4HA1P13674 534 aa9.51□□□□□ -0.89
ITGB5-212ENST00000608657 CA8P35219 290 aa9.51□□□□□ -0.89
ITGB5-212ENST00000608657 AARSP49588 968 aaKnown RBP eCLIP9.51□□□□□ -0.89
ITGB5-212ENST00000608657 NOP14P78316 857 aaKnown RBP9.51□□□□□ -0.89
ITGB5-212ENST00000608657 UBXN1Q04323 297 aa9.51□□□□□ -0.89
ITGB5-212ENST00000608657 UBE3AQ05086 875 aa9.51□□□□□ -0.89
ITGB5-212ENST00000608657 USP41Q3LFD5 358 aa9.51□□□□□ -0.89
ITGB5-212ENST00000608657 WDR72Q3MJ13 1102 aa9.51□□□□□ -0.89
ITGB5-212ENST00000608657 TIGD5Q53EQ6 642 aa9.51□□□□□ -0.89
ITGB5-212ENST00000608657 ZNF697Q5TEC3 545 aa9.51□□□□□ -0.89
ITGB5-212ENST00000608657 FAM171A1Q5VUB5 890 aa9.51□□□□□ -0.89
ITGB5-212ENST00000608657 E4F1Q66K89 784 aaPredicted RBP9.51□□□□□ -0.89
ITGB5-212ENST00000608657 SCARA3Q6AZY7 606 aa9.51□□□□□ -0.89
ITGB5-212ENST00000608657 SPOPLQ6IQ16 392 aa9.51□□□□□ -0.89
ITGB5-212ENST00000608657 CD300LGQ6UXG3 332 aa9.51□□□□□ -0.89
ITGB5-212ENST00000608657 DDX53Q86TM3 631 aaKnown RBP9.51□□□□□ -0.89
ITGB5-212ENST00000608657 EHBP1Q8NDI1 1231 aa9.51□□□□□ -0.89
ITGB5-212ENST00000608657 GDPD5Q8WTR4 605 aa9.51□□□□□ -0.89
ITGB5-212ENST00000608657 SUSD3Q96L08 255 aa9.51□□□□□ -0.89
ITGB5-212ENST00000608657 SENP8Q96LD8 212 aa9.51□□□□□ -0.89
ITGB5-212ENST00000608657 NT5C1BQ96P26 610 aa9.51□□□□□ -0.89
ITGB5-212ENST00000608657 PI4K2AQ9BTU6 479 aa9.51□□□□□ -0.89
ITGB5-212ENST00000608657 HERC2P3Q9BVR0 1158 aa9.51□□□□□ -0.89
ITGB5-212ENST00000608657 INTS2Q9H0H0 1204 aaKnown RBP9.51□□□□□ -0.89
ITGB5-212ENST00000608657 XYLT2Q9H1B5 865 aa9.51□□□□□ -0.89
ITGB5-212ENST00000608657 ZNF576Q9H609 170 aa9.51□□□□□ -0.89
ITGB5-212ENST00000608657 L2HGDHQ9H9P8 463 aa9.51□□□□□ -0.89
ITGB5-212ENST00000608657 ALG13Q9NP73 1137 aaKnown RBP9.51□□□□□ -0.89
ITGB5-212ENST00000608657 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.51□□□□□ -0.89
ITGB5-212ENST00000608657 TRMT1Q9NXH9 659 aaKnown RBP9.51□□□□□ -0.89
ITGB5-212ENST00000608657 NXF1Q9UBU9 619 aaKnown RBP9.51□□□□□ -0.89
ITGB5-212ENST00000608657 LZTS1Q9Y250 596 aa9.51□□□□□ -0.89
ITGB5-212ENST00000608657 SNX9Q9Y5X1 595 aa9.51□□□□□ -0.89
ITGB5-212ENST00000608657 LRRC10BA6NIK2 292 aa9.5□□□□□ -0.89
ITGB5-212ENST00000608657 M0QZQ0 153 aa9.5□□□□□ -0.89
ITGB5-212ENST00000608657 CYB561D2O14569 222 aa9.5□□□□□ -0.89
ITGB5-212ENST00000608657 SYN3O14994 580 aa9.5□□□□□ -0.89
ITGB5-212ENST00000608657 CSPG5O95196 566 aa9.5□□□□□ -0.89
ITGB5-212ENST00000608657 URODP06132 367 aa9.5□□□□□ -0.89
ITGB5-212ENST00000608657 IGFBP6P24592 240 aaPredicted RBP9.5□□□□□ -0.89
ITGB5-212ENST00000608657 TKTP29401 623 aaKnown RBP9.5□□□□□ -0.89
ITGB5-212ENST00000608657 GLUD2P49448 558 aa9.5□□□□□ -0.89
ITGB5-212ENST00000608657 FAM193AP78312 1265 aa9.5□□□□□ -0.89
ITGB5-212ENST00000608657 BMS1Q14692 1282 aaKnown RBP9.5□□□□□ -0.89
ITGB5-212ENST00000608657 EXOC3L4Q17RC7 722 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms