RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 USP25Q9UHP3 1055 aa15.63■□□□□ 0.09
HDDC2-204ENST00000608295 TMEM221A6NGB7 291 aa15.62■□□□□ 0.09
HDDC2-204ENST00000608295 M0R296 226 aa15.62■□□□□ 0.09
HDDC2-204ENST00000608295 NARSO43776 548 aaKnown RBP15.62■□□□□ 0.09
HDDC2-204ENST00000608295 EXOC3O60645 756 aa15.62■□□□□ 0.09
HDDC2-204ENST00000608295 PDGFBP01127 241 aaPredicted RBP15.62■□□□□ 0.09
HDDC2-204ENST00000608295 TNNC2P02585 160 aa15.62■□□□□ 0.09
HDDC2-204ENST00000608295 HNRNPA1P09651 372 aaKnown RBP eCLIP15.62■□□□□ 0.09
HDDC2-204ENST00000608295 ACAT1P24752 427 aaKnown RBP15.62■□□□□ 0.09
HDDC2-204ENST00000608295 CASP4P49662 377 aa15.62■□□□□ 0.09
HDDC2-204ENST00000608295 PNOCQ13519 176 aa15.62■□□□□ 0.09
HDDC2-204ENST00000608295 MTMR3Q13615 1198 aa15.62■□□□□ 0.09
HDDC2-204ENST00000608295 CCDC142Q17RM4 750 aa15.62■□□□□ 0.09
HDDC2-204ENST00000608295 KNOP1Q1ED39 458 aaKnown RBP15.62■□□□□ 0.09
HDDC2-204ENST00000608295 SLC5A9Q2M3M2 681 aa15.62■□□□□ 0.09
HDDC2-204ENST00000608295 SLC39A12Q504Y0 691 aa15.62■□□□□ 0.09
HDDC2-204ENST00000608295 METTL23Q86XA0 190 aa15.62■□□□□ 0.09
HDDC2-204ENST00000608295 SMYD4Q8IYR2 804 aaPredicted RBP15.62■□□□□ 0.09
HDDC2-204ENST00000608295 ATAD1Q8NBU5 361 aa15.62■□□□□ 0.09
HDDC2-204ENST00000608295 ELMO3Q96BJ8 720 aa15.62■□□□□ 0.09
HDDC2-204ENST00000608295 TSPAN18Q96SJ8 248 aa15.62■□□□□ 0.09
HDDC2-204ENST00000608295 CRISPLD1Q9H336 500 aa15.62■□□□□ 0.09
HDDC2-204ENST00000608295 DNMT3BQ9UBC3 853 aaKnown RBP15.62■□□□□ 0.09
HDDC2-204ENST00000608295 SIX4Q9UIU6 781 aa15.62■□□□□ 0.09
HDDC2-204ENST00000608295 SORCS3Q9UPU3 1222 aa15.62■□□□□ 0.09
HDDC2-204ENST00000608295 USTQ9Y2C2 406 aa15.62■□□□□ 0.09
HDDC2-204ENST00000608295 SLC27A5Q9Y2P5 690 aa15.62■□□□□ 0.09
HDDC2-204ENST00000608295 YIPF1Q9Y548 306 aa15.62■□□□□ 0.09
HDDC2-204ENST00000608295 MTMR11A4FU01 709 aa15.61■□□□□ 0.09
HDDC2-204ENST00000608295 KPNA7A9QM74 516 aa15.61■□□□□ 0.09
HDDC2-204ENST00000608295 NRG2O14511 850 aaPredicted RBP15.61■□□□□ 0.09
HDDC2-204ENST00000608295 ABLIM3O94929 683 aa15.61■□□□□ 0.09
HDDC2-204ENST00000608295 VNN2O95498 520 aa15.61■□□□□ 0.09
HDDC2-204ENST00000608295 ATF2P15336 505 aa15.61■□□□□ 0.09
HDDC2-204ENST00000608295 GJA1P17302 382 aa15.61■□□□□ 0.09
HDDC2-204ENST00000608295 TNNI1P19237 187 aa15.61■□□□□ 0.09
HDDC2-204ENST00000608295 TYMPP19971 482 aa15.61■□□□□ 0.09
HDDC2-204ENST00000608295 HOXA9P31269 272 aa15.61■□□□□ 0.09
HDDC2-204ENST00000608295 CYP24A1Q07973 514 aa15.61■□□□□ 0.09
HDDC2-204ENST00000608295 DPYDQ12882 1025 aa15.61■□□□□ 0.09
HDDC2-204ENST00000608295 DUSP4Q13115 394 aa15.61■□□□□ 0.09
HDDC2-204ENST00000608295 BMT2Q1RMZ1 405 aa15.61■□□□□ 0.09
HDDC2-204ENST00000608295 TRIM67Q6ZTA4 783 aa15.61■□□□□ 0.09
HDDC2-204ENST00000608295 ZDHHC14Q8IZN3 488 aa15.61■□□□□ 0.09
HDDC2-204ENST00000608295 HS6ST3Q8IZP7 471 aa15.61■□□□□ 0.09
HDDC2-204ENST00000608295 PLCD3Q8N3E9 789 aa15.61■□□□□ 0.09
HDDC2-204ENST00000608295 XXYLT1Q8NBI6 393 aa15.61■□□□□ 0.09
HDDC2-204ENST00000608295 STKLD1Q8NE28 680 aa15.61■□□□□ 0.09
HDDC2-204ENST00000608295 CACTINQ8WUQ7 758 aaKnown RBP15.61■□□□□ 0.09
HDDC2-204ENST00000608295 CCDC47Q96A33 483 aaKnown RBP15.61■□□□□ 0.09
HDDC2-204ENST00000608295 TCEAL4Q96EI5 215 aa15.61■□□□□ 0.09
HDDC2-204ENST00000608295 FNBP1Q96RU3 617 aa15.61■□□□□ 0.09
HDDC2-204ENST00000608295 SEPT5Q99719 369 aaPredicted RBP15.61■□□□□ 0.09
HDDC2-204ENST00000608295 RTP3Q9BQQ7 232 aa15.61■□□□□ 0.09
HDDC2-204ENST00000608295 INTS13Q9NVM9 706 aa15.61■□□□□ 0.09
HDDC2-204ENST00000608295 AFF4Q9UHB7 1163 aaKnown RBP15.61■□□□□ 0.09
HDDC2-204ENST00000608295 ITGA11Q9UKX5 1188 aa15.61■□□□□ 0.09
HDDC2-204ENST00000608295 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.61■□□□□ 0.09
HDDC2-204ENST00000608295 SNX9Q9Y5X1 595 aa15.61■□□□□ 0.09
HDDC2-204ENST00000608295 FAM237AA0A1B0GTK4 181 aa15.6■□□□□ 0.09
HDDC2-204ENST00000608295 OR6C75A6NL08 312 aa15.6■□□□□ 0.09
HDDC2-204ENST00000608295 GPR37L1O60883 481 aa15.6■□□□□ 0.09
HDDC2-204ENST00000608295 OAZ2O95190 189 aa15.6■□□□□ 0.09
HDDC2-204ENST00000608295 RHOP08100 348 aa15.6■□□□□ 0.09
HDDC2-204ENST00000608295 MYL4P12829 197 aa15.6■□□□□ 0.09
HDDC2-204ENST00000608295 CEBPBP17676 345 aa15.6■□□□□ 0.09
HDDC2-204ENST00000608295 CEP135Q66GS9 1140 aa15.6■□□□□ 0.09
HDDC2-204ENST00000608295 NT5DC4Q86YG4 428 aa15.6■□□□□ 0.09
HDDC2-204ENST00000608295 FGF13Q92913 245 aa15.6■□□□□ 0.09
HDDC2-204ENST00000608295 CGRRF1Q99675 332 aa15.6■□□□□ 0.09
HDDC2-204ENST00000608295 KCNK12Q9HB15 430 aa15.6■□□□□ 0.09
HDDC2-204ENST00000608295 ABI2Q9NYB9 513 aaPredicted RBP15.6■□□□□ 0.09
HDDC2-204ENST00000608295 L1RE1Q9UN81 338 aa15.6■□□□□ 0.09
HDDC2-204ENST00000608295 MRPS23Q9Y3D9 190 aaKnown RBP15.6■□□□□ 0.09
HDDC2-204ENST00000608295 R3HCC1Q9Y3T6 440 aaKnown RBP15.6■□□□□ 0.09
HDDC2-204ENST00000608295 TRIOO75962 3097 aa15.6■□□□□ 0.09
HDDC2-204ENST00000608295 COL4A3Q01955 1670 aa15.6■□□□□ 0.09
HDDC2-204ENST00000608295 KMT2EQ8IZD2 1858 aa15.59■□□□□ 0.09
HDDC2-204ENST00000608295 PRR33A8MZF0 331 aa15.59■□□□□ 0.09
HDDC2-204ENST00000608295 KIAA0391O15091 583 aaKnown RBP15.59■□□□□ 0.09
HDDC2-204ENST00000608295 CFHP08603 1231 aa15.59■□□□□ 0.09
HDDC2-204ENST00000608295 SIGLEC14Q08ET2 396 aa15.59■□□□□ 0.09
HDDC2-204ENST00000608295 MGAT5BQ3V5L5 792 aa15.59■□□□□ 0.09
HDDC2-204ENST00000608295 TPGS2Q68CL5 300 aa15.59■□□□□ 0.09
HDDC2-204ENST00000608295 CYP26C1Q6V0L0 522 aa15.59■□□□□ 0.09
HDDC2-204ENST00000608295 WDR49Q8IV35 697 aa15.59■□□□□ 0.09
HDDC2-204ENST00000608295 TCEAL8Q8IYN2 117 aa15.59■□□□□ 0.09
HDDC2-204ENST00000608295 ADGRF2Q8IZF7 708 aa15.59■□□□□ 0.09
HDDC2-204ENST00000608295 FMR1NBQ8N0W7 255 aaPredicted RBP15.59■□□□□ 0.09
HDDC2-204ENST00000608295 PDCL2Q8N4E4 241 aa15.59■□□□□ 0.09
HDDC2-204ENST00000608295 PLEKHO2Q8TD55 490 aa15.59■□□□□ 0.09
HDDC2-204ENST00000608295 GPR152Q8TDT2 470 aa15.59■□□□□ 0.09
HDDC2-204ENST00000608295 PBXIP1Q96AQ6 731 aa15.59■□□□□ 0.09
HDDC2-204ENST00000608295 MCRS1Q96EZ8 462 aa15.59■□□□□ 0.09
HDDC2-204ENST00000608295 BORCS6Q96GS4 357 aa15.59■□□□□ 0.09
HDDC2-204ENST00000608295 KXD1Q9BQD3 176 aa15.59■□□□□ 0.09
HDDC2-204ENST00000608295 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.59■□□□□ 0.09
HDDC2-204ENST00000608295 CEP72Q9P209 647 aa15.59■□□□□ 0.09
HDDC2-204ENST00000608295 CDH7Q9ULB5 785 aa15.59■□□□□ 0.09
HDDC2-204ENST00000608295 NUMBLQ9Y6R0 609 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms