RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 POLD4Q9HCU8 107 aa12.88□□□□□ -0.35
PDLIM1P1-201ENST00000604187 LHX6Q9UPM6 363 aa12.88□□□□□ -0.35
PDLIM1P1-201ENST00000604187 TNFSF13BQ9Y275 285 aa12.88□□□□□ -0.35
PDLIM1P1-201ENST00000604187 VWA8A3KMH1 1905 aa12.88□□□□□ -0.35
PDLIM1P1-201ENST00000604187 LNP1A1A4G5 178 aa12.87□□□□□ -0.35
PDLIM1P1-201ENST00000604187 SOBPA7XYQ1 873 aa12.87□□□□□ -0.35
PDLIM1P1-201ENST00000604187 DCLK1O15075 740 aa12.87□□□□□ -0.35
PDLIM1P1-201ENST00000604187 ATG13O75143 517 aa12.87□□□□□ -0.35
PDLIM1P1-201ENST00000604187 MED24O75448 989 aa12.87□□□□□ -0.35
PDLIM1P1-201ENST00000604187 CAVIN2O95810 425 aa12.87□□□□□ -0.35
PDLIM1P1-201ENST00000604187 KCNE1P15382 129 aa12.87□□□□□ -0.35
PDLIM1P1-201ENST00000604187 KRT2P35908 639 aa12.87□□□□□ -0.35
PDLIM1P1-201ENST00000604187 PLCB2Q00722 1185 aa12.87□□□□□ -0.35
PDLIM1P1-201ENST00000604187 GRSF1Q12849 480 aaKnown RBP eCLIP12.87□□□□□ -0.35
PDLIM1P1-201ENST00000604187 GPR158Q5T848 1215 aa12.87□□□□□ -0.35
PDLIM1P1-201ENST00000604187 FSTL4Q6MZW2 842 aa12.87□□□□□ -0.35
PDLIM1P1-201ENST00000604187 LRSAM1Q6UWE0 723 aa12.87□□□□□ -0.35
PDLIM1P1-201ENST00000604187 GAREM2Q75VX8 874 aa12.87□□□□□ -0.35
PDLIM1P1-201ENST00000604187 BEST2Q8NFU1 509 aa12.87□□□□□ -0.35
PDLIM1P1-201ENST00000604187 BPIFB1Q8TDL5 484 aa12.87□□□□□ -0.35
PDLIM1P1-201ENST00000604187 TNFRSF25Q93038 417 aa12.87□□□□□ -0.35
PDLIM1P1-201ENST00000604187 IFT74Q96LB3 600 aa12.87□□□□□ -0.35
PDLIM1P1-201ENST00000604187 NACC1Q96RE7 527 aa12.87□□□□□ -0.35
PDLIM1P1-201ENST00000604187 SCNM1Q9BWG6 230 aa12.87□□□□□ -0.35
PDLIM1P1-201ENST00000604187 SMG9Q9H0W8 520 aaKnown RBP12.87□□□□□ -0.35
PDLIM1P1-201ENST00000604187 ATXN3LQ9H3M9 355 aa12.87□□□□□ -0.35
PDLIM1P1-201ENST00000604187 ZSWIM6Q9HCJ5 1215 aa12.87□□□□□ -0.35
PDLIM1P1-201ENST00000604187 TUFT1Q9NNX1 390 aa12.87□□□□□ -0.35
PDLIM1P1-201ENST00000604187 OBP2AQ9NY56 170 aa12.87□□□□□ -0.35
PDLIM1P1-201ENST00000604187 PCDHB8Q9UN66 801 aa12.87□□□□□ -0.35
PDLIM1P1-201ENST00000604187 STK36Q9NRP7 1315 aa12.87□□□□□ -0.35
PDLIM1P1-201ENST00000604187 DMXL2Q8TDJ6 3036 aa12.86□□□□□ -0.35
PDLIM1P1-201ENST00000604187 WNT7AO00755 349 aa12.86□□□□□ -0.35
PDLIM1P1-201ENST00000604187 SOAT2O75908 522 aa12.86□□□□□ -0.35
PDLIM1P1-201ENST00000604187 MARCKSP29966 332 aaPredicted RBP12.86□□□□□ -0.35
PDLIM1P1-201ENST00000604187 ALDH1A3P47895 512 aa12.86□□□□□ -0.35
PDLIM1P1-201ENST00000604187 MCM2P49736 904 aa12.86□□□□□ -0.35
PDLIM1P1-201ENST00000604187 YWHAHQ04917 246 aaPredicted RBP12.86□□□□□ -0.35
PDLIM1P1-201ENST00000604187 SCRN1Q12765 414 aa12.86□□□□□ -0.35
PDLIM1P1-201ENST00000604187 DUSP4Q13115 394 aa12.86□□□□□ -0.35
PDLIM1P1-201ENST00000604187 TMEM196Q5HYL7 178 aa12.86□□□□□ -0.35
PDLIM1P1-201ENST00000604187 KIAA1211LQ6NV74 962 aa12.86□□□□□ -0.35
PDLIM1P1-201ENST00000604187 MTMR9Q96QG7 549 aa12.86□□□□□ -0.35
PDLIM1P1-201ENST00000604187 CNTN3Q9P232 1028 aa12.86□□□□□ -0.35
PDLIM1P1-201ENST00000604187 DAXXQ9UER7 740 aaPredicted RBP12.86□□□□□ -0.35
PDLIM1P1-201ENST00000604187 TUBGCP4Q9UGJ1 667 aa12.86□□□□□ -0.35
PDLIM1P1-201ENST00000604187 SLC27A5Q9Y2P5 690 aa12.86□□□□□ -0.35
PDLIM1P1-201ENST00000604187 TIMM13Q9Y5L4 95 aaPredicted RBP12.86□□□□□ -0.35
PDLIM1P1-201ENST00000604187 CYP46A1Q9Y6A2 500 aa12.86□□□□□ -0.35
PDLIM1P1-201ENST00000604187 WDFY3Q8IZQ1 3526 aa12.85□□□□□ -0.35
PDLIM1P1-201ENST00000604187 SMG1Q96Q15 3661 aaKnown RBP12.85□□□□□ -0.35
PDLIM1P1-201ENST00000604187 IGSF10Q6WRI0 2623 aa12.85□□□□□ -0.35
PDLIM1P1-201ENST00000604187 BCLAF3A2AJT9 711 aaKnown RBP12.85□□□□□ -0.35
PDLIM1P1-201ENST00000604187 K7ERI5 159 aa12.85□□□□□ -0.35
PDLIM1P1-201ENST00000604187 MEFVO15553 781 aaPredicted RBP12.85□□□□□ -0.35
PDLIM1P1-201ENST00000604187 RNF40O75150 1001 aa12.85□□□□□ -0.35
PDLIM1P1-201ENST00000604187 RHOBTB1O94844 696 aa12.85□□□□□ -0.35
PDLIM1P1-201ENST00000604187 HARSP12081 509 aaKnown RBP12.85□□□□□ -0.35
PDLIM1P1-201ENST00000604187 GABRR2P28476 465 aa12.85□□□□□ -0.35
PDLIM1P1-201ENST00000604187 CYP4F8P98187 520 aa12.85□□□□□ -0.35
PDLIM1P1-201ENST00000604187 PTPAQ15257 358 aa12.85□□□□□ -0.35
PDLIM1P1-201ENST00000604187 ARHGAP15Q53QZ3 475 aa12.85□□□□□ -0.35
PDLIM1P1-201ENST00000604187 CAMKK1Q8N5S9 505 aa12.85□□□□□ -0.35
PDLIM1P1-201ENST00000604187 TTC9BQ8N6N2 239 aa12.85□□□□□ -0.35
PDLIM1P1-201ENST00000604187 PSMG2Q969U7 264 aa12.85□□□□□ -0.35
PDLIM1P1-201ENST00000604187 ACAP3Q96P50 834 aa12.85□□□□□ -0.35
PDLIM1P1-201ENST00000604187 ACO2Q99798 780 aaKnown RBP12.85□□□□□ -0.35
PDLIM1P1-201ENST00000604187 BRMS1Q9HCU9 246 aa12.85□□□□□ -0.35
PDLIM1P1-201ENST00000604187 PTPRHQ9HD43 1115 aa12.85□□□□□ -0.35
PDLIM1P1-201ENST00000604187 TMEM9BQ9NQ34 198 aa12.85□□□□□ -0.35
PDLIM1P1-201ENST00000604187 THG1LQ9NWX6 298 aaKnown RBP12.85□□□□□ -0.35
PDLIM1P1-201ENST00000604187 TICRRQ7Z2Z1 1910 aa12.85□□□□□ -0.35
PDLIM1P1-201ENST00000604187 ARID2Q68CP9 1835 aa12.85□□□□□ -0.35
PDLIM1P1-201ENST00000604187 PHLPP2Q6ZVD8 1323 aa12.85□□□□□ -0.35
PDLIM1P1-201ENST00000604187 OAZ2O95190 189 aa12.84□□□□□ -0.35
PDLIM1P1-201ENST00000604187 FGF19O95750 216 aa12.84□□□□□ -0.35
PDLIM1P1-201ENST00000604187 EGFP01133 1207 aa12.84□□□□□ -0.35
PDLIM1P1-201ENST00000604187 MCF2P10911 925 aa12.84□□□□□ -0.35
PDLIM1P1-201ENST00000604187 CEACAM1P13688 526 aa12.84□□□□□ -0.35
PDLIM1P1-201ENST00000604187 CSRP1P21291 193 aaKnown RBP12.84□□□□□ -0.35
PDLIM1P1-201ENST00000604187 GBP1P32455 592 aa12.84□□□□□ -0.35
PDLIM1P1-201ENST00000604187 KARSQ15046 597 aaKnown RBP12.84□□□□□ -0.35
PDLIM1P1-201ENST00000604187 CENPPQ6IPU0 288 aa12.84□□□□□ -0.35
PDLIM1P1-201ENST00000604187 DNAJB7Q7Z6W7 309 aaPredicted RBP12.84□□□□□ -0.35
PDLIM1P1-201ENST00000604187 TMEM130Q8N3G9 435 aa12.84□□□□□ -0.35
PDLIM1P1-201ENST00000604187 ATAD1Q8NBU5 361 aa12.84□□□□□ -0.35
PDLIM1P1-201ENST00000604187 KIFAP3Q92845 792 aa12.84□□□□□ -0.35
PDLIM1P1-201ENST00000604187 CHFRQ96EP1 664 aa12.84□□□□□ -0.35
PDLIM1P1-201ENST00000604187 TCHPQ9BT92 498 aa12.84□□□□□ -0.35
PDLIM1P1-201ENST00000604187 POLR3CQ9BUI4 534 aaPredicted RBP12.84□□□□□ -0.35
PDLIM1P1-201ENST00000604187 TARS2Q9BW92 718 aaKnown RBP12.84□□□□□ -0.35
PDLIM1P1-201ENST00000604187 MRPL4Q9BYD3 311 aaKnown RBP12.84□□□□□ -0.35
PDLIM1P1-201ENST00000604187 TMEM60Q9H2L4 133 aa12.84□□□□□ -0.35
PDLIM1P1-201ENST00000604187 TASP1Q9H6P5 420 aa12.84□□□□□ -0.35
PDLIM1P1-201ENST00000604187 GKN1Q9NS71 199 aa12.84□□□□□ -0.35
PDLIM1P1-201ENST00000604187 ORC3Q9UBD5 711 aaPredicted RBP12.84□□□□□ -0.35
PDLIM1P1-201ENST00000604187 TPCN1Q9ULQ1 816 aa12.84□□□□□ -0.35
PDLIM1P1-201ENST00000604187 FARP1Q9Y4F1 1045 aaPredicted RBP12.84□□□□□ -0.35
PDLIM1P1-201ENST00000604187 ASB3Q9Y575 518 aa12.84□□□□□ -0.35
PDLIM1P1-201ENST00000604187 FREM2Q5SZK8 3169 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms