RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 ZNF677Q86XU0 584 aa24.13■■□□□ 1.45
IRF3-228ENST00000601291 TRMT1Q9NXH9 659 aaKnown RBP24.13■■□□□ 1.45
IRF3-228ENST00000601291 NOCTQ9UK39 431 aaKnown RBP24.13■■□□□ 1.45
IRF3-228ENST00000601291 GOLGA6L9A6NEM1 432 aa24.12■■□□□ 1.45
IRF3-228ENST00000601291 EFCAB14O75071 495 aa24.12■■□□□ 1.45
IRF3-228ENST00000601291 ZNF132P52740 706 aa24.12■■□□□ 1.45
IRF3-228ENST00000601291 CDH8P55286 799 aa24.12■■□□□ 1.45
IRF3-228ENST00000601291 LILRA4P59901 499 aa24.12■■□□□ 1.45
IRF3-228ENST00000601291 RNASELQ05823 741 aaKnown RBP24.12■■□□□ 1.45
IRF3-228ENST00000601291 NOP9Q86U38 636 aaKnown RBP24.12■■□□□ 1.45
IRF3-228ENST00000601291 TXLNBQ8N3L3 684 aa24.12■■□□□ 1.45
IRF3-228ENST00000601291 SYT11Q9BT88 431 aa24.12■■□□□ 1.45
IRF3-228ENST00000601291 SDCBP2Q9H190 292 aa24.12■■□□□ 1.45
IRF3-228ENST00000601291 SEPT11Q9NVA2 429 aaKnown RBP24.12■■□□□ 1.45
IRF3-228ENST00000601291 A0A087X0T9 212 aa24.12■■□□□ 1.45
IRF3-228ENST00000601291 FAM228BP0C875 321 aa24.12■■□□□ 1.45
IRF3-228ENST00000601291 PAX3P23760 479 aa24.12■■□□□ 1.45
IRF3-228ENST00000601291 GNA15P30679 374 aa24.12■■□□□ 1.45
IRF3-228ENST00000601291 CDR2Q01850 454 aa24.12■■□□□ 1.45
IRF3-228ENST00000601291 UPP1Q16831 310 aa24.12■■□□□ 1.45
IRF3-228ENST00000601291 GLYCTKQ8IVS8 523 aa24.12■■□□□ 1.45
IRF3-228ENST00000601291 SLC20A1Q8WUM9 679 aa24.12■■□□□ 1.45
IRF3-228ENST00000601291 FAM193BQ96PV7 902 aaPredicted RBP24.12■■□□□ 1.45
IRF3-228ENST00000601291 MRPL9Q9BYD2 267 aaKnown RBP24.12■■□□□ 1.45
IRF3-228ENST00000601291 TBC1D13Q9NVG8 400 aa24.12■■□□□ 1.45
IRF3-228ENST00000601291 SPTLC1O15269 473 aa24.11■■□□□ 1.45
IRF3-228ENST00000601291 ZNF500O60304 480 aaPredicted RBP24.11■■□□□ 1.45
IRF3-228ENST00000601291 HUS1O60921 280 aa24.11■■□□□ 1.45
IRF3-228ENST00000601291 CILPO75339 1184 aa24.11■■□□□ 1.45
IRF3-228ENST00000601291 CYP27A1Q02318 531 aa24.11■■□□□ 1.45
IRF3-228ENST00000601291 INCA1Q0VD86 236 aa24.11■■□□□ 1.45
IRF3-228ENST00000601291 TAF3Q5VWG9 929 aa24.11■■□□□ 1.45
IRF3-228ENST00000601291 KIAA1328Q86T90 577 aa24.11■■□□□ 1.45
IRF3-228ENST00000601291 CRIPAKQ8N1N5 446 aa24.11■■□□□ 1.45
IRF3-228ENST00000601291 APPL2Q8NEU8 664 aa24.11■■□□□ 1.45
IRF3-228ENST00000601291 VWCEQ96DN2 955 aa24.11■■□□□ 1.45
IRF3-228ENST00000601291 PPP1R13BQ96KQ4 1090 aa24.11■■□□□ 1.45
IRF3-228ENST00000601291 ACP6Q9NPH0 428 aa24.11■■□□□ 1.45
IRF3-228ENST00000601291 BARX2Q9UMQ3 279 aaPredicted RBP24.11■■□□□ 1.45
IRF3-228ENST00000601291 REXO2Q9Y3B8 237 aaKnown RBP24.11■■□□□ 1.45
IRF3-228ENST00000601291 TDRD15B5MCY1 1934 aaKnown RBP24.11■■□□□ 1.45
IRF3-228ENST00000601291 USP27XA6NNY8 438 aa24.1■■□□□ 1.45
IRF3-228ENST00000601291 ZNF394Q53GI3 561 aa24.1■■□□□ 1.45
IRF3-228ENST00000601291 C10orf76Q5T2E6 689 aa24.1■■□□□ 1.45
IRF3-228ENST00000601291 DPH6Q7L8W6 267 aa24.1■■□□□ 1.45
IRF3-228ENST00000601291 TOP6BLQ8N6T0 577 aa24.1■■□□□ 1.45
IRF3-228ENST00000601291 DNAI2Q9GZS0 605 aa24.1■■□□□ 1.45
IRF3-228ENST00000601291 CACNG4Q9UBN1 327 aa24.1■■□□□ 1.45
IRF3-228ENST00000601291 PCDHA13Q9Y5I0 950 aa24.1■■□□□ 1.45
IRF3-228ENST00000601291 TET1Q8NFU7 2136 aa24.1■■□□□ 1.45
IRF3-228ENST00000601291 DDX3XO00571 662 aaKnown RBP eCLIP24.09■■□□□ 1.459e-11■□□□□ 9.6
IRF3-228ENST00000601291 ZNF263O14978 683 aa24.09■■□□□ 1.45
IRF3-228ENST00000601291 TACC1O75410 805 aa24.09■■□□□ 1.45
IRF3-228ENST00000601291 AMHP03971 560 aa24.09■■□□□ 1.45
IRF3-228ENST00000601291 PAEPP09466 180 aa24.09■■□□□ 1.45
IRF3-228ENST00000601291 MAGEA1P43355 309 aa24.09■■□□□ 1.45
IRF3-228ENST00000601291 DSC1Q08554 894 aa24.09■■□□□ 1.45
IRF3-228ENST00000601291 PPIGQ13427 754 aaKnown RBP eCLIP24.09■■□□□ 1.453e-8■■■■□ 19.9
IRF3-228ENST00000601291 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.09■■□□□ 1.45
IRF3-228ENST00000601291 SLC30A5Q8TAD4 765 aa24.09■■□□□ 1.45
IRF3-228ENST00000601291 LNX1Q8TBB1 728 aaPredicted RBP24.09■■□□□ 1.45
IRF3-228ENST00000601291 CASD1Q96PB1 797 aa24.09■■□□□ 1.45
IRF3-228ENST00000601291 HTATIP2Q9BUP3 242 aa24.09■■□□□ 1.45
IRF3-228ENST00000601291 IL23AQ9NPF7 189 aa24.09■■□□□ 1.45
IRF3-228ENST00000601291 PUF60Q9UHX1 559 aaKnown RBP24.09■■□□□ 1.45
IRF3-228ENST00000601291 NAGPAQ9UK23 515 aa24.09■■□□□ 1.45
IRF3-228ENST00000601291 MICAL3Q7RTP6 2002 aa24.09■■□□□ 1.45
IRF3-228ENST00000601291 THAP12O43422 761 aa24.08■■□□□ 1.45
IRF3-228ENST00000601291 BAIAP3O94812 1187 aa24.08■■□□□ 1.45
IRF3-228ENST00000601291 VAV2P52735 878 aa24.08■■□□□ 1.45
IRF3-228ENST00000601291 SOWAHAQ2M3V2 549 aa24.08■■□□□ 1.45
IRF3-228ENST00000601291 CCDC122Q5T0U0 273 aa24.08■■□□□ 1.45
IRF3-228ENST00000601291 ALKBH5Q6P6C2 394 aaKnown RBP24.08■■□□□ 1.45
IRF3-228ENST00000601291 DCLRE1AQ6PJP8 1040 aa24.08■■□□□ 1.45
IRF3-228ENST00000601291 C7orf61Q8IZ16 206 aa24.08■■□□□ 1.45
IRF3-228ENST00000601291 DDX1Q92499 740 aaKnown RBP24.08■■□□□ 1.45
IRF3-228ENST00000601291 PAAF1Q9BRP4 392 aa24.08■■□□□ 1.45
IRF3-228ENST00000601291 PDCL3Q9H2J4 239 aa24.08■■□□□ 1.45
IRF3-228ENST00000601291 SCN1AP35498 2009 aa24.08■■□□□ 1.45
IRF3-228ENST00000601291 CYB561D2O14569 222 aa24.08■■□□□ 1.44
IRF3-228ENST00000601291 B3GAT3O94766 335 aa24.08■■□□□ 1.44
IRF3-228ENST00000601291 MMEP08473 750 aa24.08■■□□□ 1.44
IRF3-228ENST00000601291 FAM163BP0C2L3 166 aa24.08■■□□□ 1.44
IRF3-228ENST00000601291 NDST1P52848 882 aa24.08■■□□□ 1.44
IRF3-228ENST00000601291 FMO1Q01740 532 aa24.08■■□□□ 1.44
IRF3-228ENST00000601291 ARHGAP29Q52LW3 1261 aa24.08■■□□□ 1.44
IRF3-228ENST00000601291 DSTYKQ6XUX3 929 aa24.08■■□□□ 1.44
IRF3-228ENST00000601291 ZNF280BQ86YH2 543 aa24.08■■□□□ 1.44
IRF3-228ENST00000601291 REXO1L1PQ8IX06 675 aa24.08■■□□□ 1.44
IRF3-228ENST00000601291 C3orf58Q8NDZ4 430 aa24.08■■□□□ 1.44
IRF3-228ENST00000601291 OLIG1Q8TAK6 271 aa24.08■■□□□ 1.44
IRF3-228ENST00000601291 WHAMMQ8TF30 809 aa24.08■■□□□ 1.44
IRF3-228ENST00000601291 TMEM176AQ96HP8 235 aa24.08■■□□□ 1.44
IRF3-228ENST00000601291 MRPL45Q9BRJ2 306 aaKnown RBP24.08■■□□□ 1.44
IRF3-228ENST00000601291 NT5C1AQ9BXI3 368 aa24.08■■□□□ 1.44
IRF3-228ENST00000601291 SNX25Q9H3E2 840 aa24.08■■□□□ 1.44
IRF3-228ENST00000601291 LTBP2Q14767 1821 aa24.07■■□□□ 1.44
IRF3-228ENST00000601291 TBKBP1A7MCY6 615 aa24.07■■□□□ 1.44
IRF3-228ENST00000601291 DDHD2O94830 711 aa24.07■■□□□ 1.44
IRF3-228ENST00000601291 CHRNB2P17787 502 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms