RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 BORCS6Q96GS4 357 aa18.42■□□□□ 0.54
SCAF1-204ENST00000601038 SENP8Q96LD8 212 aa18.42■□□□□ 0.54
SCAF1-204ENST00000601038 LRRC3Q9BY71 257 aa18.42■□□□□ 0.54
SCAF1-204ENST00000601038 CRISPLD1Q9H336 500 aa18.42■□□□□ 0.54
SCAF1-204ENST00000601038 TRPV4Q9HBA0 871 aa18.42■□□□□ 0.54
SCAF1-204ENST00000601038 TRPV5Q9NQA5 729 aa18.42■□□□□ 0.54
SCAF1-204ENST00000601038 STK17AQ9UEE5 414 aa18.42■□□□□ 0.54
SCAF1-204ENST00000601038 CCDC39Q9UFE4 941 aa18.42■□□□□ 0.54
SCAF1-204ENST00000601038 C2CD2Q9Y426 696 aa18.42■□□□□ 0.54
SCAF1-204ENST00000601038 MYO15AQ9UKN7 3530 aa18.42■□□□□ 0.54
SCAF1-204ENST00000601038 CFAP54Q96N23 3096 aa18.41■□□□□ 0.54
SCAF1-204ENST00000601038 FANCMQ8IYD8 2048 aa18.41■□□□□ 0.54
SCAF1-204ENST00000601038 ANO9A1A5B4 782 aa18.41■□□□□ 0.54
SCAF1-204ENST00000601038 SHISA7A6NL88 538 aa18.41■□□□□ 0.54
SCAF1-204ENST00000601038 SPTLC1O15269 473 aa18.41■□□□□ 0.54
SCAF1-204ENST00000601038 ODC1P11926 461 aa18.41■□□□□ 0.54
SCAF1-204ENST00000601038 GJA1P17302 382 aa18.41■□□□□ 0.54
SCAF1-204ENST00000601038 ALDH1A3P47895 512 aa18.41■□□□□ 0.54
SCAF1-204ENST00000601038 FZD5Q13467 585 aa18.41■□□□□ 0.54
SCAF1-204ENST00000601038 TEAD2Q15562 447 aa18.41■□□□□ 0.54
SCAF1-204ENST00000601038 ARMCX5Q6P1M9 558 aa18.41■□□□□ 0.54
SCAF1-204ENST00000601038 VITQ6UXI7 678 aa18.41■□□□□ 0.54
SCAF1-204ENST00000601038 DYMQ7RTS9 669 aa18.41■□□□□ 0.54
SCAF1-204ENST00000601038 ATAD1Q8NBU5 361 aa18.41■□□□□ 0.54
SCAF1-204ENST00000601038 SHKBP1Q8TBC3 707 aa18.41■□□□□ 0.54
SCAF1-204ENST00000601038 ZSCAN18Q8TBC5 510 aaPredicted RBP18.41■□□□□ 0.54
SCAF1-204ENST00000601038 DEPDC1BQ8WUY9 529 aa18.41■□□□□ 0.54
SCAF1-204ENST00000601038 DNAJC25Q9H1X3 360 aa18.41■□□□□ 0.54
SCAF1-204ENST00000601038 HSFX1Q9UBD0 423 aa18.41■□□□□ 0.54
SCAF1-204ENST00000601038 FBXO2Q9UK22 296 aaPredicted RBP18.41■□□□□ 0.54
SCAF1-204ENST00000601038 AGO2Q9UKV8 859 aaKnown RBP18.41■□□□□ 0.54
SCAF1-204ENST00000601038 SRPRBQ9Y5M8 271 aaKnown RBP18.41■□□□□ 0.54
SCAF1-204ENST00000601038 MTMR11A4FU01 709 aa18.4■□□□□ 0.54
SCAF1-204ENST00000601038 TISP43B9A030 160 aa18.4■□□□□ 0.54
SCAF1-204ENST00000601038 MAN2B1O00754 1011 aa18.4■□□□□ 0.54
SCAF1-204ENST00000601038 CYP11A1P05108 521 aa18.4■□□□□ 0.54
SCAF1-204ENST00000601038 VIPR2P41587 438 aa18.4■□□□□ 0.54
SCAF1-204ENST00000601038 POSTNQ15063 836 aa18.4■□□□□ 0.54
SCAF1-204ENST00000601038 SFR1Q86XK3 245 aa18.4■□□□□ 0.54
SCAF1-204ENST00000601038 E2F7Q96AV8 911 aa18.4■□□□□ 0.54
SCAF1-204ENST00000601038 HVCN1Q96D96 273 aa18.4■□□□□ 0.54
SCAF1-204ENST00000601038 STRA6Q9BX79 667 aa18.4■□□□□ 0.54
SCAF1-204ENST00000601038 ZNF334Q9HCZ1 680 aaPredicted RBP18.4■□□□□ 0.54
SCAF1-204ENST00000601038 SEL1LQ9UBV2 794 aa18.4■□□□□ 0.54
SCAF1-204ENST00000601038 DSEQ9UL01 958 aa18.4■□□□□ 0.54
SCAF1-204ENST00000601038 SLC27A5Q9Y2P5 690 aa18.4■□□□□ 0.54
SCAF1-204ENST00000601038 ASB3Q9Y575 518 aa18.4■□□□□ 0.54
SCAF1-204ENST00000601038 PPP1R37O75864 691 aa18.39■□□□□ 0.53
SCAF1-204ENST00000601038 GDI1P31150 447 aa18.39■□□□□ 0.53
SCAF1-204ENST00000601038 RRAGBQ5VZM2 374 aa18.39■□□□□ 0.53
SCAF1-204ENST00000601038 DNAJB7Q7Z6W7 309 aaPredicted RBP18.39■□□□□ 0.53
SCAF1-204ENST00000601038 TMC8Q8IU68 726 aa18.39■□□□□ 0.53
SCAF1-204ENST00000601038 MFSD6LQ8IWD5 586 aa18.39■□□□□ 0.53
SCAF1-204ENST00000601038 TMEM209Q96SK2 561 aa18.39■□□□□ 0.53
SCAF1-204ENST00000601038 SLITRK6Q9H5Y7 841 aa18.39■□□□□ 0.53
SCAF1-204ENST00000601038 DPP3Q9NY33 737 aa18.39■□□□□ 0.53
SCAF1-204ENST00000601038 VPS13AQ96RL7 3174 aa18.38■□□□□ 0.53
SCAF1-204ENST00000601038 F5P12259 2224 aa18.38■□□□□ 0.53
SCAF1-204ENST00000601038 A0A1W2PRU2 124 aa18.38■□□□□ 0.53
SCAF1-204ENST00000601038 HEPACAM2A8MVW5 462 aa18.38■□□□□ 0.53
SCAF1-204ENST00000601038 ZNF263O14978 683 aa18.38■□□□□ 0.53
SCAF1-204ENST00000601038 KINO60870 393 aaKnown RBP18.38■□□□□ 0.53
SCAF1-204ENST00000601038 GAP43P17677 238 aa18.38■□□□□ 0.53
SCAF1-204ENST00000601038 SYT1P21579 422 aa18.38■□□□□ 0.53
SCAF1-204ENST00000601038 ADSSP30520 456 aa18.38■□□□□ 0.53
SCAF1-204ENST00000601038 TXLNAP40222 546 aa18.38■□□□□ 0.53
SCAF1-204ENST00000601038 CSTF1Q05048 431 aaKnown RBP18.38■□□□□ 0.53
SCAF1-204ENST00000601038 RESTQ13127 1097 aa18.38■□□□□ 0.53
SCAF1-204ENST00000601038 CRELD2Q6UXH1 353 aaPredicted RBP18.38■□□□□ 0.53
SCAF1-204ENST00000601038 SV2BQ7L1I2 683 aa18.38■□□□□ 0.53
SCAF1-204ENST00000601038 ZNF687Q8N1G0 1237 aa18.38■□□□□ 0.53
SCAF1-204ENST00000601038 OR10T2Q8NGX3 314 aa18.38■□□□□ 0.53
SCAF1-204ENST00000601038 POMGNT1Q8WZA1 660 aa18.38■□□□□ 0.53
SCAF1-204ENST00000601038 PSMG2Q969U7 264 aa18.38■□□□□ 0.53
SCAF1-204ENST00000601038 CLIC6Q96NY7 704 aa18.38■□□□□ 0.53
SCAF1-204ENST00000601038 MRPL44Q9H9J2 332 aaKnown RBP18.38■□□□□ 0.53
SCAF1-204ENST00000601038 EXOC7Q9UPT5 735 aa18.38■□□□□ 0.53
SCAF1-204ENST00000601038 SCN1AP35498 2009 aa18.37■□□□□ 0.53
SCAF1-204ENST00000601038 MYMKA6NI61 221 aa18.37■□□□□ 0.53
SCAF1-204ENST00000601038 CYB561D2O14569 222 aa18.37■□□□□ 0.53
SCAF1-204ENST00000601038 IL18RAPO95256 599 aa18.37■□□□□ 0.53
SCAF1-204ENST00000601038 FGF19O95750 216 aa18.37■□□□□ 0.53
SCAF1-204ENST00000601038 TUFMP49411 452 aaKnown RBP18.37■□□□□ 0.53
SCAF1-204ENST00000601038 TAF6P49848 677 aa18.37■□□□□ 0.53
SCAF1-204ENST00000601038 MLLT6P55198 1093 aaPredicted RBP18.37■□□□□ 0.53
SCAF1-204ENST00000601038 FOXK2Q01167 660 aa18.37■□□□□ 0.53
SCAF1-204ENST00000601038 FAM173BQ6P4H8 233 aa18.37■□□□□ 0.53
SCAF1-204ENST00000601038 GAREM2Q75VX8 874 aa18.37■□□□□ 0.53
SCAF1-204ENST00000601038 ITIH5Q86UX2 942 aa18.37■□□□□ 0.53
SCAF1-204ENST00000601038 METTL23Q86XA0 190 aa18.37■□□□□ 0.53
SCAF1-204ENST00000601038 NT5DC4Q86YG4 428 aa18.37■□□□□ 0.53
SCAF1-204ENST00000601038 TTC9BQ8N6N2 239 aa18.37■□□□□ 0.53
SCAF1-204ENST00000601038 SUMF1Q8NBK3 374 aa18.37■□□□□ 0.53
SCAF1-204ENST00000601038 FAM3CQ92520 227 aa18.37■□□□□ 0.53
SCAF1-204ENST00000601038 DNAJC19Q96DA6 116 aa18.37■□□□□ 0.53
SCAF1-204ENST00000601038 PYM1Q9BRP8 204 aaKnown RBP18.37■□□□□ 0.53
SCAF1-204ENST00000601038 ZCWPW1Q9H0M4 648 aa18.37■□□□□ 0.53
SCAF1-204ENST00000601038 IKZF4Q9H2S9 585 aa18.37■□□□□ 0.53
SCAF1-204ENST00000601038 NDRG2Q9UN36 371 aaKnown RBP18.37■□□□□ 0.53
SCAF1-204ENST00000601038 PCDHGA2Q9Y5H1 932 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms