RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 PPM1AP35813 382 aa12.38□□□□□ -0.43
ZNF548-211ENST00000600927 EIF4A3P38919 411 aaKnown RBP12.38□□□□□ -0.43
ZNF548-211ENST00000600927 PBX3P40426 434 aa12.38□□□□□ -0.43
ZNF548-211ENST00000600927 GCLMP48507 274 aa12.38□□□□□ -0.43
ZNF548-211ENST00000600927 KIF11P52732 1056 aa12.38□□□□□ -0.43
ZNF548-211ENST00000600927 VAV2P52735 878 aa12.38□□□□□ -0.43
ZNF548-211ENST00000600927 MFAP3P55082 362 aa12.38□□□□□ -0.43
ZNF548-211ENST00000600927 RAPGEF1Q13905 1077 aa12.38□□□□□ -0.43
ZNF548-211ENST00000600927 BMS1Q14692 1282 aaKnown RBP12.38□□□□□ -0.43
ZNF548-211ENST00000600927 SLC18A3Q16572 532 aa12.38□□□□□ -0.43
ZNF548-211ENST00000600927 ARHGAP29Q52LW3 1261 aa12.38□□□□□ -0.43
ZNF548-211ENST00000600927 TCEAL5Q5H9L2 206 aa12.38□□□□□ -0.43
ZNF548-211ENST00000600927 IQCEQ6IPM2 695 aa12.38□□□□□ -0.43
ZNF548-211ENST00000600927 SV2AQ7L0J3 742 aa12.38□□□□□ -0.43
ZNF548-211ENST00000600927 NT5DC4Q86YG4 428 aa12.38□□□□□ -0.43
ZNF548-211ENST00000600927 WDR49Q8IV35 697 aa12.38□□□□□ -0.43
ZNF548-211ENST00000600927 CD302Q8IX05 232 aa12.38□□□□□ -0.43
ZNF548-211ENST00000600927 GSTCDQ8NEC7 633 aa12.38□□□□□ -0.43
ZNF548-211ENST00000600927 ZNF558Q96NG5 402 aa12.38□□□□□ -0.43
ZNF548-211ENST00000600927 CGRRF1Q99675 332 aa12.38□□□□□ -0.43
ZNF548-211ENST00000600927 TCHPQ9BT92 498 aa12.38□□□□□ -0.43
ZNF548-211ENST00000600927 HAPLN2Q9GZV7 340 aa12.38□□□□□ -0.43
ZNF548-211ENST00000600927 NXF3Q9H4D5 531 aaKnown RBP12.38□□□□□ -0.43
ZNF548-211ENST00000600927 NRDE2Q9H7Z3 1164 aa12.38□□□□□ -0.43
ZNF548-211ENST00000600927 UBN1Q9NPG3 1134 aa12.38□□□□□ -0.43
ZNF548-211ENST00000600927 RBAKQ9NYW8 714 aaPredicted RBP12.38□□□□□ -0.43
ZNF548-211ENST00000600927 INTUQ9ULD6 942 aa12.38□□□□□ -0.43
ZNF548-211ENST00000600927 HES2Q9Y543 173 aa12.38□□□□□ -0.43
ZNF548-211ENST00000600927 FHOD1Q9Y613 1164 aa12.38□□□□□ -0.43
ZNF548-211ENST00000600927 CARNS1A5YM72 827 aa12.37□□□□□ -0.43
ZNF548-211ENST00000600927 BTNL10A8MVZ5 291 aa12.37□□□□□ -0.43
ZNF548-211ENST00000600927 CLTAP09496 248 aa12.37□□□□□ -0.43
ZNF548-211ENST00000600927 MATR3P43243 847 aaKnown RBP eCLIP12.37□□□□□ -0.43
ZNF548-211ENST00000600927 BCAR1P56945 870 aa12.37□□□□□ -0.43
ZNF548-211ENST00000600927 DSC1Q08554 894 aa12.37□□□□□ -0.43
ZNF548-211ENST00000600927 KIF5AQ12840 1032 aa12.37□□□□□ -0.43
ZNF548-211ENST00000600927 DRAP1Q14919 205 aaPredicted RBP12.37□□□□□ -0.43
ZNF548-211ENST00000600927 CTC1Q2NKJ3 1217 aa12.37□□□□□ -0.43
ZNF548-211ENST00000600927 WDR44Q5JSH3 913 aa12.37□□□□□ -0.43
ZNF548-211ENST00000600927 SPOUT1Q5T280 376 aaKnown RBP12.37□□□□□ -0.43
ZNF548-211ENST00000600927 EEF1DP3Q658K8 133 aa12.37□□□□□ -0.43
ZNF548-211ENST00000600927 PHLDB3Q6NSJ2 640 aa12.37□□□□□ -0.43
ZNF548-211ENST00000600927 TMEM173Q86WV6 379 aaPredicted RBP12.37□□□□□ -0.43
ZNF548-211ENST00000600927 CDR2LQ86X02 465 aaPredicted RBP12.37□□□□□ -0.43
ZNF548-211ENST00000600927 RNF10Q8N5U6 811 aaKnown RBP12.37□□□□□ -0.43
ZNF548-211ENST00000600927 ZSWIM2Q8NEG5 633 aa12.37□□□□□ -0.43
ZNF548-211ENST00000600927 HLA-CQ95604 372 aa12.37□□□□□ -0.43
ZNF548-211ENST00000600927 CCDC127Q96BQ5 260 aa12.37□□□□□ -0.43
ZNF548-211ENST00000600927 ZBTB45Q96K62 511 aaPredicted RBP12.37□□□□□ -0.43
ZNF548-211ENST00000600927 CALR3Q96L12 384 aaKnown RBP12.37□□□□□ -0.43
ZNF548-211ENST00000600927 NT5C1BQ96P26 610 aa12.37□□□□□ -0.43
ZNF548-211ENST00000600927 FAM124BQ9H5Z6 455 aaPredicted RBP12.37□□□□□ -0.43
ZNF548-211ENST00000600927 ASB7Q9H672 318 aa12.37□□□□□ -0.43
ZNF548-211ENST00000600927 UBE2ZQ9H832 354 aaPredicted RBP12.37□□□□□ -0.43
ZNF548-211ENST00000600927 GIT1Q9Y2X7 761 aa12.37□□□□□ -0.43
ZNF548-211ENST00000600927 ARL5CA6NH57 179 aa12.36□□□□□ -0.43
ZNF548-211ENST00000600927 F8VZ95 297 aa12.36□□□□□ -0.43
ZNF548-211ENST00000600927 DDHD2O94830 711 aa12.36□□□□□ -0.43
ZNF548-211ENST00000600927 NPTXRO95502 500 aa12.36□□□□□ -0.43
ZNF548-211ENST00000600927 EFEMP2O95967 443 aa12.36□□□□□ -0.43
ZNF548-211ENST00000600927 GALTP07902 379 aa12.36□□□□□ -0.43
ZNF548-211ENST00000600927 ITGA4P13612 1032 aa12.36□□□□□ -0.43
ZNF548-211ENST00000600927 TNNI1P19237 187 aa12.36□□□□□ -0.43
ZNF548-211ENST00000600927 MLH1P40692 756 aa12.36□□□□□ -0.43
ZNF548-211ENST00000600927 ACOT2P49753 483 aa12.36□□□□□ -0.43
ZNF548-211ENST00000600927 ERVFC1P60507 584 aa12.36□□□□□ -0.43
ZNF548-211ENST00000600927 MRPS5P82675 430 aaKnown RBP12.36□□□□□ -0.43
ZNF548-211ENST00000600927 TFF2Q03403 129 aa12.36□□□□□ -0.43
ZNF548-211ENST00000600927 HYAL1Q12794 435 aa12.36□□□□□ -0.43
ZNF548-211ENST00000600927 DUOXA2Q1HG44 320 aa12.36□□□□□ -0.43
ZNF548-211ENST00000600927 DCAF4L1Q3SXM0 396 aa12.36□□□□□ -0.43
ZNF548-211ENST00000600927 TDRD12Q587J7 1177 aaKnown RBP12.36□□□□□ -0.43
ZNF548-211ENST00000600927 TJAP1Q5JTD0 557 aa12.36□□□□□ -0.43
ZNF548-211ENST00000600927 ZNF280BQ86YH2 543 aa12.36□□□□□ -0.43
ZNF548-211ENST00000600927 THNSL1Q8IYQ7 743 aa12.36□□□□□ -0.43
ZNF548-211ENST00000600927 BCL7CQ8WUZ0 217 aaPredicted RBP12.36□□□□□ -0.43
ZNF548-211ENST00000600927 TAF4BQ92750 862 aa12.36□□□□□ -0.43
ZNF548-211ENST00000600927 PABPC5Q96DU9 382 aaKnown RBP12.36□□□□□ -0.43
ZNF548-211ENST00000600927 ASB2Q96Q27 587 aa12.36□□□□□ -0.43
ZNF548-211ENST00000600927 ADPGKQ9BRR6 497 aa12.36□□□□□ -0.43
ZNF548-211ENST00000600927 TMEM175Q9BSA9 504 aa12.36□□□□□ -0.43
ZNF548-211ENST00000600927 DESI2Q9BSY9 194 aa12.36□□□□□ -0.43
ZNF548-211ENST00000600927 UBE2TQ9NPD8 197 aaPredicted RBP12.36□□□□□ -0.43
ZNF548-211ENST00000600927 TLR9Q9NR96 1032 aa12.36□□□□□ -0.43
ZNF548-211ENST00000600927 SPG21Q9NZD8 308 aa12.36□□□□□ -0.43
ZNF548-211ENST00000600927 KANSL3Q9P2N6 904 aa12.36□□□□□ -0.43
ZNF548-211ENST00000600927 DNAJB4Q9UDY4 337 aa12.36□□□□□ -0.43
ZNF548-211ENST00000600927 INPP5FQ9Y2H2 1132 aa12.36□□□□□ -0.43
ZNF548-211ENST00000600927 REXO2Q9Y3B8 237 aaKnown RBP12.36□□□□□ -0.43
ZNF548-211ENST00000600927 PCDHA13Q9Y5I0 950 aa12.36□□□□□ -0.43
ZNF548-211ENST00000600927 BRWD1Q9NSI6 2320 aa12.36□□□□□ -0.43
ZNF548-211ENST00000600927 DLATP10515 647 aaKnown RBP12.35□□□□□ -0.43
ZNF548-211ENST00000600927 TBXAS1P24557 533 aaPredicted RBP12.35□□□□□ -0.43
ZNF548-211ENST00000600927 LTBRP36941 435 aa12.35□□□□□ -0.43
ZNF548-211ENST00000600927 ARHGAP25P42331 645 aa12.35□□□□□ -0.43
ZNF548-211ENST00000600927 MAGEA1P43355 309 aa12.35□□□□□ -0.43
ZNF548-211ENST00000600927 SLC11A1P49279 550 aa12.35□□□□□ -0.43
ZNF548-211ENST00000600927 BPIFB4P59827 614 aa12.35□□□□□ -0.43
ZNF548-211ENST00000600927 ZNF568Q3ZCX4 644 aa12.35□□□□□ -0.43
ZNF548-211ENST00000600927 PDE12Q6L8Q7 609 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms