RNA–Protein interactions for RNA: ENST00000600689.1

UPF1-210, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-210ENST00000600689 HAUS6Q7Z4H7 955 aa19.4■□□□□ 0.7
UPF1-210ENST00000600689 LRRC6Q86X45 466 aa19.4■□□□□ 0.7
UPF1-210ENST00000600689 C10orf82Q8WW14 230 aa19.4■□□□□ 0.7
UPF1-210ENST00000600689 SCG3Q8WXD2 468 aaKnown RBP19.4■□□□□ 0.7
UPF1-210ENST00000600689 OSBPL8Q9BZF1 889 aa19.4■□□□□ 0.7
UPF1-210ENST00000600689 LARSQ9P2J5 1176 aaKnown RBP19.4■□□□□ 0.7
UPF1-210ENST00000600689 SAE1Q9UBE0 346 aaPredicted RBP19.4■□□□□ 0.7
UPF1-210ENST00000600689 HEY2Q9UBP5 337 aa19.4■□□□□ 0.7
UPF1-210ENST00000600689 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.4■□□□□ 0.7
UPF1-210ENST00000600689 CETN2P41208 172 aa19.39■□□□□ 0.69
UPF1-210ENST00000600689 SKIV2L2P42285 1042 aaKnown RBP19.39■□□□□ 0.69
UPF1-210ENST00000600689 C11orf91Q3C1V1 193 aa19.39■□□□□ 0.69
UPF1-210ENST00000600689 CCDC89Q8N998 374 aa19.39■□□□□ 0.69
UPF1-210ENST00000600689 ZNF75CPQ92670 426 aaPredicted RBP19.39■□□□□ 0.69
UPF1-210ENST00000600689 GLIS2Q9BZE0 524 aaPredicted RBP19.39■□□□□ 0.69
UPF1-210ENST00000600689 TUFT1Q9NNX1 390 aa19.39■□□□□ 0.69
UPF1-210ENST00000600689 UVRAGQ9P2Y5 699 aa19.39■□□□□ 0.69
UPF1-210ENST00000600689 COL4A5P29400 1685 aa19.39■□□□□ 0.69
UPF1-210ENST00000600689 MROH7Q68CQ1 1323 aa19.39■□□□□ 0.69
UPF1-210ENST00000600689 SSTR1P30872 391 aa19.39■□□□□ 0.69
UPF1-210ENST00000600689 ACVR2BQ13705 512 aa19.39■□□□□ 0.69
UPF1-210ENST00000600689 PARP6Q2NL67 630 aa19.39■□□□□ 0.69
UPF1-210ENST00000600689 FAM102BQ5T8I3 360 aa19.39■□□□□ 0.69
UPF1-210ENST00000600689 TTC7BQ86TV6 843 aa19.39■□□□□ 0.69
UPF1-210ENST00000600689 CCNJLQ8IV13 435 aa19.39■□□□□ 0.69
UPF1-210ENST00000600689 NT5C1BQ96P26 610 aa19.39■□□□□ 0.69
UPF1-210ENST00000600689 CYTH2Q99418 400 aa19.39■□□□□ 0.69
UPF1-210ENST00000600689 CADM1Q9BY67 442 aaKnown RBP19.39■□□□□ 0.69
UPF1-210ENST00000600689 TNS1Q9HBL0 1735 aaKnown RBP19.39■□□□□ 0.69
UPF1-210ENST00000600689 MYH11P35749 1972 aa19.39■□□□□ 0.69
UPF1-210ENST00000600689 GYG2O15488 501 aa19.38■□□□□ 0.69
UPF1-210ENST00000600689 STAT2P52630 851 aa19.38■□□□□ 0.69
UPF1-210ENST00000600689 SPOPLQ6IQ16 392 aa19.38■□□□□ 0.69
UPF1-210ENST00000600689 EGFL6Q8IUX8 553 aa19.38■□□□□ 0.69
UPF1-210ENST00000600689 LARGE2Q8N3Y3 721 aa19.38■□□□□ 0.69
UPF1-210ENST00000600689 CFAP57Q96MR6 1250 aa19.38■□□□□ 0.69
UPF1-210ENST00000600689 ZNF70Q9UC06 446 aaPredicted RBP19.38■□□□□ 0.69
UPF1-210ENST00000600689 IPO5O00410 1097 aaKnown RBP19.38■□□□□ 0.69
UPF1-210ENST00000600689 SORBS3O60504 671 aa19.38■□□□□ 0.69
UPF1-210ENST00000600689 FDX1P10109 184 aa19.38■□□□□ 0.69
UPF1-210ENST00000600689 SNRNP35Q16560 246 aaKnown RBP19.38■□□□□ 0.69
UPF1-210ENST00000600689 PLA2G4FQ68DD2 849 aa19.38■□□□□ 0.69
UPF1-210ENST00000600689 RSBN1LQ6PCB5 846 aaPredicted RBP19.38■□□□□ 0.69
UPF1-210ENST00000600689 TEX9Q8N6V9 391 aa19.38■□□□□ 0.69
UPF1-210ENST00000600689 WDR60Q8WVS4 1066 aa19.38■□□□□ 0.69
UPF1-210ENST00000600689 NRG4Q8WWG1 115 aa19.38■□□□□ 0.69
UPF1-210ENST00000600689 ACCSQ96QU6 501 aa19.38■□□□□ 0.69
UPF1-210ENST00000600689 SLC17A7Q9P2U7 560 aa19.38■□□□□ 0.69
UPF1-210ENST00000600689 LGALS13Q9UHV8 139 aa19.38■□□□□ 0.69
UPF1-210ENST00000600689 WASF2Q9Y6W5 498 aa19.38■□□□□ 0.69
UPF1-210ENST00000600689 MRPS35P82673 323 aaKnown RBP19.38■□□□□ 0.69
UPF1-210ENST00000600689 DLGAP5Q15398 846 aa19.38■□□□□ 0.69
UPF1-210ENST00000600689 ACSBG2Q5FVE4 666 aa19.38■□□□□ 0.69
UPF1-210ENST00000600689 FYB2Q5VWT5 728 aa19.38■□□□□ 0.69
UPF1-210ENST00000600689 MIER3Q7Z3K6 550 aa19.38■□□□□ 0.69
UPF1-210ENST00000600689 SHC3Q92529 594 aa19.38■□□□□ 0.69
UPF1-210ENST00000600689 DDX27Q96GQ7 796 aaKnown RBP19.38■□□□□ 0.69
UPF1-210ENST00000600689 WFS1O76024 890 aa19.37■□□□□ 0.69
UPF1-210ENST00000600689 SERPINB3P29508 390 aa19.37■□□□□ 0.69
UPF1-210ENST00000600689 CLNKQ7Z7G1 428 aa19.37■□□□□ 0.69
UPF1-210ENST00000600689 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.37■□□□□ 0.691e-6■■■■■ 32.6
UPF1-210ENST00000600689 MORC4Q8TE76 937 aa19.37■□□□□ 0.69
UPF1-210ENST00000600689 TMOD2Q9NZR1 351 aa19.37■□□□□ 0.69
UPF1-210ENST00000600689 SEL1LQ9UBV2 794 aa19.37■□□□□ 0.69
UPF1-210ENST00000600689 ATAD5Q96QE3 1844 aa19.37■□□□□ 0.69
UPF1-210ENST00000600689 ATP5HO75947 161 aa19.37■□□□□ 0.69
UPF1-210ENST00000600689 KCNA3P22001 575 aa19.37■□□□□ 0.69
UPF1-210ENST00000600689 PTPN4P29074 926 aa19.37■□□□□ 0.69
UPF1-210ENST00000600689 CIITAP33076 1130 aa19.37■□□□□ 0.69
UPF1-210ENST00000600689 NSFP46459 744 aaKnown RBP19.37■□□□□ 0.69
UPF1-210ENST00000600689 PDK4Q16654 411 aa19.37■□□□□ 0.69
UPF1-210ENST00000600689 PDCD7Q8N8D1 485 aaKnown RBP19.37■□□□□ 0.69
UPF1-210ENST00000600689 RBBP8NLQ8NC74 664 aaPredicted RBP19.37■□□□□ 0.69
UPF1-210ENST00000600689 KIFAP3Q92845 792 aa19.37■□□□□ 0.69
UPF1-210ENST00000600689 TTC17Q96AE7 1141 aa19.37■□□□□ 0.69
UPF1-210ENST00000600689 TRIM4Q9C037 500 aa19.37■□□□□ 0.69
UPF1-210ENST00000600689 FBXO28Q9NVF7 368 aa19.37■□□□□ 0.69
UPF1-210ENST00000600689 STK32BQ9NY57 414 aa19.37■□□□□ 0.69
UPF1-210ENST00000600689 CCDC15Q0P6D6 951 aa19.36■□□□□ 0.69
UPF1-210ENST00000600689 CEP55Q53EZ4 464 aa19.36■□□□□ 0.69
UPF1-210ENST00000600689 C4orf50Q6ZRC1 276 aa19.36■□□□□ 0.69
UPF1-210ENST00000600689 HELQQ8TDG4 1101 aa19.36■□□□□ 0.69
UPF1-210ENST00000600689 STMN2Q93045 179 aa19.36■□□□□ 0.69
UPF1-210ENST00000600689 CAMKK2Q96RR4 588 aa19.36■□□□□ 0.69
UPF1-210ENST00000600689 TMEM121Q9BTD3 319 aa19.36■□□□□ 0.69
UPF1-210ENST00000600689 CNTNAP1P78357 1384 aa19.36■□□□□ 0.69
UPF1-210ENST00000600689 BAG2O95816 211 aa19.36■□□□□ 0.69
UPF1-210ENST00000600689 RFX1P22670 979 aa19.36■□□□□ 0.69
UPF1-210ENST00000600689 RAB27AP51159 221 aa19.36■□□□□ 0.69
UPF1-210ENST00000600689 THOC5Q13769 683 aaKnown RBP19.36■□□□□ 0.69
UPF1-210ENST00000600689 TFDP1Q14186 410 aa19.36■□□□□ 0.69
UPF1-210ENST00000600689 CLEC16AQ2KHT3 1053 aa19.36■□□□□ 0.69
UPF1-210ENST00000600689 MCOLN2Q8IZK6 566 aa19.36■□□□□ 0.69
UPF1-210ENST00000600689 STOML1Q9UBI4 398 aa19.36■□□□□ 0.69
UPF1-210ENST00000600689 SGK1O00141 431 aa19.36■□□□□ 0.69
UPF1-210ENST00000600689 HAUS5O94927 633 aa19.36■□□□□ 0.69
UPF1-210ENST00000600689 CCNG1P51959 295 aa19.36■□□□□ 0.69
UPF1-210ENST00000600689 SP4Q02446 784 aa19.36■□□□□ 0.69
UPF1-210ENST00000600689 LRRC36Q1X8D7 754 aa19.36■□□□□ 0.69
UPF1-210ENST00000600689 KRT39Q6A163 491 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms