RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 TIMP1P01033 207 aa13.63□□□□□ -0.23
ZNF548-210ENST00000600442 THP07101 528 aa13.63□□□□□ -0.23
ZNF548-210ENST00000600442 CYP11B1P15538 503 aa13.63□□□□□ -0.23
ZNF548-210ENST00000600442 RPL9P32969 192 aaKnown RBP13.63□□□□□ -0.23
ZNF548-210ENST00000600442 CYP27A1Q02318 531 aa13.63□□□□□ -0.23
ZNF548-210ENST00000600442 SV2CQ496J9 727 aa13.63□□□□□ -0.23
ZNF548-210ENST00000600442 TJAP1Q5JTD0 557 aa13.63□□□□□ -0.23
ZNF548-210ENST00000600442 TMEM270Q6UE05 265 aa13.63□□□□□ -0.23
ZNF548-210ENST00000600442 SLC24A5Q71RS6 500 aa13.63□□□□□ -0.23
ZNF548-210ENST00000600442 URGCPQ8TCY9 931 aa13.63□□□□□ -0.23
ZNF548-210ENST00000600442 UBE2Q2Q8WVN8 375 aa13.63□□□□□ -0.23
ZNF548-210ENST00000600442 SECISBP2LQ93073 1101 aaKnown RBP13.63□□□□□ -0.23
ZNF548-210ENST00000600442 WNT8BQ93098 351 aa13.63□□□□□ -0.23
ZNF548-210ENST00000600442 DDX27Q96GQ7 796 aaKnown RBP13.63□□□□□ -0.23
ZNF548-210ENST00000600442 NOX5Q96PH1 765 aa13.63□□□□□ -0.23
ZNF548-210ENST00000600442 MMS19Q96T76 1030 aa13.63□□□□□ -0.23
ZNF548-210ENST00000600442 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.63□□□□□ -0.231e-8■□□□□ 10.6
ZNF548-210ENST00000600442 GPR88Q9GZN0 384 aa13.63□□□□□ -0.23
ZNF548-210ENST00000600442 RRAGDQ9NQL2 400 aaPredicted RBP13.63□□□□□ -0.23
ZNF548-210ENST00000600442 KANSL3Q9P2N6 904 aa13.63□□□□□ -0.23
ZNF548-210ENST00000600442 PUF60Q9UHX1 559 aaKnown RBP13.63□□□□□ -0.23
ZNF548-210ENST00000600442 GUCA1BQ9UMX6 200 aa13.63□□□□□ -0.23
ZNF548-210ENST00000600442 CNTN6Q9UQ52 1028 aa13.63□□□□□ -0.23
ZNF548-210ENST00000600442 HES2Q9Y543 173 aa13.63□□□□□ -0.23
ZNF548-210ENST00000600442 NUB1Q9Y5A7 615 aa13.63□□□□□ -0.23
ZNF548-210ENST00000600442 CHD9Q3L8U1 2897 aa13.62□□□□□ -0.23
ZNF548-210ENST00000600442 A0A087X0T9 212 aa13.62□□□□□ -0.23
ZNF548-210ENST00000600442 USP27XA6NNY8 438 aa13.62□□□□□ -0.23
ZNF548-210ENST00000600442 PAEPP09466 180 aa13.62□□□□□ -0.23
ZNF548-210ENST00000600442 FAM163BP0C2L3 166 aa13.62□□□□□ -0.23
ZNF548-210ENST00000600442 FAM228BP0C875 321 aa13.62□□□□□ -0.23
ZNF548-210ENST00000600442 GZMAP12544 262 aa13.62□□□□□ -0.23
ZNF548-210ENST00000600442 ZBTB6Q15916 424 aa13.62□□□□□ -0.23
ZNF548-210ENST00000600442 SPOPLQ6IQ16 392 aa13.62□□□□□ -0.23
ZNF548-210ENST00000600442 GLB1LQ6UWU2 654 aa13.62□□□□□ -0.23
ZNF548-210ENST00000600442 C16orf59Q7L2K0 433 aa13.62□□□□□ -0.23
ZNF548-210ENST00000600442 GLYCTKQ8IVS8 523 aa13.62□□□□□ -0.23
ZNF548-210ENST00000600442 RPUSD2Q8IZ73 545 aaKnown RBP13.62□□□□□ -0.23
ZNF548-210ENST00000600442 RBBP8NLQ8NC74 664 aaPredicted RBP13.62□□□□□ -0.23
ZNF548-210ENST00000600442 RNF169Q8NCN4 708 aa13.62□□□□□ -0.23
ZNF548-210ENST00000600442 MSANTD4Q8NCY6 345 aa13.62□□□□□ -0.23
ZNF548-210ENST00000600442 SMG8Q8ND04 991 aaKnown RBP13.62□□□□□ -0.23
ZNF548-210ENST00000600442 TRIM58Q8NG06 486 aa13.62□□□□□ -0.23
ZNF548-210ENST00000600442 TIFAQ96CG3 184 aa13.62□□□□□ -0.23
ZNF548-210ENST00000600442 UROC1Q96N76 676 aa13.62□□□□□ -0.23
ZNF548-210ENST00000600442 XYLT2Q9H1B5 865 aa13.62□□□□□ -0.23
ZNF548-210ENST00000600442 HIPK3Q9H422 1215 aa13.62□□□□□ -0.23
ZNF548-210ENST00000600442 AGO3Q9H9G7 860 aaKnown RBP13.62□□□□□ -0.23
ZNF548-210ENST00000600442 RGS18Q9NS28 235 aa13.62□□□□□ -0.23
ZNF548-210ENST00000600442 CISHQ9NSE2 258 aa13.62□□□□□ -0.23
ZNF548-210ENST00000600442 KLK14Q9P0G3 267 aa13.62□□□□□ -0.23
ZNF548-210ENST00000600442 AJAP1Q9UKB5 411 aaPredicted RBP13.62□□□□□ -0.23
ZNF548-210ENST00000600442 CTAGE9A4FU28 777 aa13.61□□□□□ -0.23
ZNF548-210ENST00000600442 BTNL10A8MVZ5 291 aa13.61□□□□□ -0.23
ZNF548-210ENST00000600442 GRXCR1A8MXD5 290 aa13.61□□□□□ -0.23
ZNF548-210ENST00000600442 TNFRSF10AO00220 468 aa13.61□□□□□ -0.23
ZNF548-210ENST00000600442 PJA2O43164 708 aa13.61□□□□□ -0.23
ZNF548-210ENST00000600442 HOXA2O43364 376 aa13.61□□□□□ -0.23
ZNF548-210ENST00000600442 HUS1O60921 280 aa13.61□□□□□ -0.23
ZNF548-210ENST00000600442 RTN2O75298 545 aa13.61□□□□□ -0.23
ZNF548-210ENST00000600442 CD58P19256 250 aa13.61□□□□□ -0.23
ZNF548-210ENST00000600442 GNA15P30679 374 aa13.61□□□□□ -0.23
ZNF548-210ENST00000600442 RFC2P35250 354 aa13.61□□□□□ -0.23
ZNF548-210ENST00000600442 TAF6P49848 677 aa13.61□□□□□ -0.23
ZNF548-210ENST00000600442 SNX16P57768 344 aa13.61□□□□□ -0.23
ZNF548-210ENST00000600442 DSC3Q14574 896 aa13.61□□□□□ -0.23
ZNF548-210ENST00000600442 STILQ15468 1287 aa13.61□□□□□ -0.23
ZNF548-210ENST00000600442 ZNF569Q5MCW4 686 aa13.61□□□□□ -0.23
ZNF548-210ENST00000600442 C9orf57Q5W0N0 161 aa13.61□□□□□ -0.23
ZNF548-210ENST00000600442 MFSD5Q6N075 450 aa13.61□□□□□ -0.23
ZNF548-210ENST00000600442 ABI1Q8IZP0 508 aa13.61□□□□□ -0.23
ZNF548-210ENST00000600442 EPS8L1Q8TE68 723 aa13.61□□□□□ -0.23
ZNF548-210ENST00000600442 PPM1EQ8WY54 764 aa13.61□□□□□ -0.23
ZNF548-210ENST00000600442 KAT5Q92993 513 aa13.61□□□□□ -0.23
ZNF548-210ENST00000600442 BCO2Q9BYV7 579 aa13.61□□□□□ -0.23
ZNF548-210ENST00000600442 RSAD1Q9HA92 442 aa13.61□□□□□ -0.23
ZNF548-210ENST00000600442 APOBEC3GQ9HC16 384 aaKnown RBP13.61□□□□□ -0.23
ZNF548-210ENST00000600442 DNAI1Q9UI46 699 aa13.61□□□□□ -0.23
ZNF548-210ENST00000600442 SIX4Q9UIU6 781 aa13.61□□□□□ -0.23
ZNF548-210ENST00000600442 TBX21Q9UL17 535 aa13.61□□□□□ -0.23
ZNF548-210ENST00000600442 TCF20Q9UGU0 1960 aaKnown RBP13.61□□□□□ -0.23
ZNF548-210ENST00000600442 UMODL1Q5DID0 1318 aa13.61□□□□□ -0.23
ZNF548-210ENST00000600442 A0A0A6YYK5 440 aaPredicted RBP13.6□□□□□ -0.23
ZNF548-210ENST00000600442 ANKRD62A6NC57 917 aa13.6□□□□□ -0.23
ZNF548-210ENST00000600442 ARL5CA6NH57 179 aa13.6□□□□□ -0.23
ZNF548-210ENST00000600442 DDX3XO00571 662 aaKnown RBP eCLIP13.6□□□□□ -0.23
ZNF548-210ENST00000600442 THAP12O43422 761 aa13.6□□□□□ -0.23
ZNF548-210ENST00000600442 LSM8O95777 96 aaKnown RBP13.6□□□□□ -0.23
ZNF548-210ENST00000600442 PNMA6AP0CW24 399 aaPredicted RBP13.6□□□□□ -0.23
ZNF548-210ENST00000600442 MYBL1P10243 752 aa13.6□□□□□ -0.23
ZNF548-210ENST00000600442 ACO1P21399 889 aaKnown RBP13.6□□□□□ -0.23
ZNF548-210ENST00000600442 LRPAP1P30533 357 aa13.6□□□□□ -0.23
ZNF548-210ENST00000600442 PBX2P40425 430 aa13.6□□□□□ -0.23
ZNF548-210ENST00000600442 NOP2P46087 812 aaKnown RBP13.6□□□□□ -0.23
ZNF548-210ENST00000600442 NSFP46459 744 aaKnown RBP13.6□□□□□ -0.23
ZNF548-210ENST00000600442 TMEM240Q5SV17 173 aa13.6□□□□□ -0.23
ZNF548-210ENST00000600442 LIN9Q5TKA1 542 aa13.6□□□□□ -0.23
ZNF548-210ENST00000600442 SYT10Q6XYQ8 523 aa13.6□□□□□ -0.23
ZNF548-210ENST00000600442 DPH6Q7L8W6 267 aa13.6□□□□□ -0.23
ZNF548-210ENST00000600442 SLC47A2Q86VL8 602 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms