RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 C1QTNF12Q5T7M4 302 aa16.98■□□□□ 0.31
SYDE1-204ENST00000600440 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.98■□□□□ 0.312e-8■■□□□ 12.1
SYDE1-204ENST00000600440 PRPF31Q8WWY3 499 aaKnown RBP16.98■□□□□ 0.31
SYDE1-204ENST00000600440 FAM111AQ96PZ2 611 aa16.98■□□□□ 0.31
SYDE1-204ENST00000600440 SLIT2O94813 1529 aa16.98■□□□□ 0.31
SYDE1-204ENST00000600440 PRPF4O43172 522 aaKnown RBP eCLIP16.98■□□□□ 0.313e-6■■■■□ 20.9
SYDE1-204ENST00000600440 TCEA3O75764 348 aa16.98■□□□□ 0.31
SYDE1-204ENST00000600440 SPATA31C1P0DKV0 1188 aa16.98■□□□□ 0.31
SYDE1-204ENST00000600440 KRT5P13647 590 aa16.98■□□□□ 0.31
SYDE1-204ENST00000600440 HOXA7P31268 230 aaPredicted RBP16.98■□□□□ 0.31
SYDE1-204ENST00000600440 DLG1Q12959 904 aa16.98■□□□□ 0.31
SYDE1-204ENST00000600440 RBM44Q6ZP01 1051 aaKnown RBP16.98■□□□□ 0.31
SYDE1-204ENST00000600440 NEDD1Q8NHV4 660 aa16.98■□□□□ 0.31
SYDE1-204ENST00000600440 CYP2W1Q8TAV3 490 aa16.98■□□□□ 0.31
SYDE1-204ENST00000600440 PSPC1Q8WXF1 523 aaKnown RBP16.98■□□□□ 0.31
SYDE1-204ENST00000600440 PPP2R3CQ969Q6 453 aa16.98■□□□□ 0.31
SYDE1-204ENST00000600440 C1orf167Q5SNV9 1468 aa16.98■□□□□ 0.31
SYDE1-204ENST00000600440 GOLGA8IPA6NC78 632 aa16.98■□□□□ 0.31
SYDE1-204ENST00000600440 GOLGA8JA6NMD2 632 aa16.98■□□□□ 0.31
SYDE1-204ENST00000600440 ZNF862O60290 1169 aa16.98■□□□□ 0.31
SYDE1-204ENST00000600440 HNRNPCL1O60812 293 aaKnown RBP16.98■□□□□ 0.31
SYDE1-204ENST00000600440 TMCC1O94876 653 aa16.98■□□□□ 0.31
SYDE1-204ENST00000600440 SLURP2P0DP57 97 aa16.98■□□□□ 0.31
SYDE1-204ENST00000600440 AQP4P55087 323 aa16.98■□□□□ 0.31
SYDE1-204ENST00000600440 CDK16Q00536 496 aa16.98■□□□□ 0.31
SYDE1-204ENST00000600440 CAV1Q03135 178 aa16.98■□□□□ 0.31
SYDE1-204ENST00000600440 ASPHQ12797 758 aa16.98■□□□□ 0.31
SYDE1-204ENST00000600440 USH1GQ495M9 461 aa16.98■□□□□ 0.31
SYDE1-204ENST00000600440 ODR4Q5SWX8 454 aa16.98■□□□□ 0.31
SYDE1-204ENST00000600440 DPP8Q6V1X1 898 aaPredicted RBP16.98■□□□□ 0.31
SYDE1-204ENST00000600440 C12orf50Q8NA57 414 aaPredicted RBP16.98■□□□□ 0.31
SYDE1-204ENST00000600440 EPS8L1Q8TE68 723 aa16.98■□□□□ 0.31
SYDE1-204ENST00000600440 DHX38Q92620 1227 aaKnown RBP16.98■□□□□ 0.31
SYDE1-204ENST00000600440 CCDC127Q96BQ5 260 aa16.98■□□□□ 0.31
SYDE1-204ENST00000600440 RILPQ96NA2 401 aa16.98■□□□□ 0.31
SYDE1-204ENST00000600440 ANO3Q9BYT9 981 aa16.98■□□□□ 0.31
SYDE1-204ENST00000600440 MYOCOSA0A1B0GUC4 107 aa16.97■□□□□ 0.31
SYDE1-204ENST00000600440 ZNF189O75820 626 aaPredicted RBP16.97■□□□□ 0.31
SYDE1-204ENST00000600440 POTEJP0CG39 1038 aa16.97■□□□□ 0.31
SYDE1-204ENST00000600440 SERPINB6P35237 376 aa16.97■□□□□ 0.31
SYDE1-204ENST00000600440 ZNF76P36508 570 aa16.97■□□□□ 0.31
SYDE1-204ENST00000600440 BFSP1Q12934 665 aa16.97■□□□□ 0.31
SYDE1-204ENST00000600440 NCOA4Q13772 614 aa16.97■□□□□ 0.31
SYDE1-204ENST00000600440 SFT2D3Q587I9 215 aa16.97■□□□□ 0.31
SYDE1-204ENST00000600440 HYIQ5T013 277 aa16.97■□□□□ 0.31
SYDE1-204ENST00000600440 OR6Y1Q8NGX8 325 aa16.97■□□□□ 0.31
SYDE1-204ENST00000600440 WDR66Q8TBY9 1149 aa16.97■□□□□ 0.31
SYDE1-204ENST00000600440 OXNAD1Q96HP4 312 aaPredicted RBP16.97■□□□□ 0.31
SYDE1-204ENST00000600440 FAM84AQ96KN4 292 aa16.97■□□□□ 0.31
SYDE1-204ENST00000600440 MIS12Q9H081 205 aa16.97■□□□□ 0.31
SYDE1-204ENST00000600440 C10orf88Q9H8K7 445 aa16.97■□□□□ 0.31
SYDE1-204ENST00000600440 RARBP10826 455 aa16.97■□□□□ 0.31
SYDE1-204ENST00000600440 ABCD1P33897 745 aa16.97■□□□□ 0.31
SYDE1-204ENST00000600440 ARSEP51690 589 aa16.97■□□□□ 0.31
SYDE1-204ENST00000600440 TFDP1Q14186 410 aa16.97■□□□□ 0.31
SYDE1-204ENST00000600440 TREML1Q86YW5 311 aa16.97■□□□□ 0.31
SYDE1-204ENST00000600440 ULK2Q8IYT8 1036 aa16.97■□□□□ 0.31
SYDE1-204ENST00000600440 ZSWIM2Q8NEG5 633 aa16.97■□□□□ 0.31
SYDE1-204ENST00000600440 CNKSR2Q8WXI2 1034 aa16.97■□□□□ 0.31
SYDE1-204ENST00000600440 ACSF2Q96CM8 615 aaPredicted RBP16.97■□□□□ 0.31
SYDE1-204ENST00000600440 TTC25Q96NG3 672 aa16.97■□□□□ 0.31
SYDE1-204ENST00000600440 HAPLN3Q96S86 360 aa16.97■□□□□ 0.31
SYDE1-204ENST00000600440 IWS1Q96ST2 819 aa16.97■□□□□ 0.31
SYDE1-204ENST00000600440 ZNF395Q9H8N7 513 aaPredicted RBP16.97■□□□□ 0.31
SYDE1-204ENST00000600440 CYP4F11Q9HBI6 524 aa16.97■□□□□ 0.31
SYDE1-204ENST00000600440 CYLDQ9NQC7 956 aa16.97■□□□□ 0.31
SYDE1-204ENST00000600440 AGPAT3Q9NRZ7 376 aa16.97■□□□□ 0.31
SYDE1-204ENST00000600440 EURLQ9NYK6 297 aa16.97■□□□□ 0.31
SYDE1-204ENST00000600440 SLC7A8Q9UHI5 535 aa16.97■□□□□ 0.31
SYDE1-204ENST00000600440 PNMA6FA0A0J9YX94 578 aa16.96■□□□□ 0.31
SYDE1-204ENST00000600440 BTDP43251 543 aa16.96■□□□□ 0.31
SYDE1-204ENST00000600440 GAD2Q05329 585 aa16.96■□□□□ 0.31
SYDE1-204ENST00000600440 PPP3CAQ08209 521 aa16.96■□□□□ 0.31
SYDE1-204ENST00000600440 CETN1Q12798 172 aa16.96■□□□□ 0.31
SYDE1-204ENST00000600440 SH2D4BQ5SQS7 431 aa16.96■□□□□ 0.31
SYDE1-204ENST00000600440 PSMC3IPQ9P2W1 217 aaPredicted RBP16.96■□□□□ 0.31
SYDE1-204ENST00000600440 HSFX1Q9UBD0 423 aa16.96■□□□□ 0.31
SYDE1-204ENST00000600440 TYROBPO43914 113 aa16.96■□□□□ 0.31
SYDE1-204ENST00000600440 PDE5AO76074 875 aa16.96■□□□□ 0.31
SYDE1-204ENST00000600440 TRIP10Q15642 601 aa16.96■□□□□ 0.31
SYDE1-204ENST00000600440 PIP4K2CQ8TBX8 421 aa16.96■□□□□ 0.31
SYDE1-204ENST00000600440 CPA5Q8WXQ8 436 aa16.96■□□□□ 0.31
SYDE1-204ENST00000600440 ARHGEF38Q9NXL2 777 aa16.96■□□□□ 0.31
SYDE1-204ENST00000600440 PCDHA1Q9Y5I3 950 aa16.96■□□□□ 0.31
SYDE1-204ENST00000600440 NUP98P52948 1817 aa16.96■□□□□ 0.31
SYDE1-204ENST00000600440 ATP8B3O60423 1300 aa16.96■□□□□ 0.31
SYDE1-204ENST00000600440 SORBS2O94875 1100 aaKnown RBP16.95■□□□□ 0.3
SYDE1-204ENST00000600440 PEX2P28328 305 aa16.95■□□□□ 0.3
SYDE1-204ENST00000600440 TBC1D9BQ66K14 1250 aa16.95■□□□□ 0.3
SYDE1-204ENST00000600440 RINT1Q6NUQ1 792 aa16.95■□□□□ 0.3
SYDE1-204ENST00000600440 PRPF39Q86UA1 669 aaKnown RBP16.95■□□□□ 0.3
SYDE1-204ENST00000600440 SMC1BQ8NDV3 1235 aa16.95■□□□□ 0.3
SYDE1-204ENST00000600440 GRIP2Q9C0E4 1043 aa16.95■□□□□ 0.3
SYDE1-204ENST00000600440 A0A0J9YVX5 310 aa16.95■□□□□ 0.3
SYDE1-204ENST00000600440 PENKP01210 267 aaPredicted RBP16.95■□□□□ 0.3
SYDE1-204ENST00000600440 ADARP55265 1226 aaKnown RBP16.95■□□□□ 0.3
SYDE1-204ENST00000600440 IKQ13123 557 aaPredicted RBP16.95■□□□□ 0.3
SYDE1-204ENST00000600440 RASA3Q14644 834 aa16.95■□□□□ 0.3
SYDE1-204ENST00000600440 ACAP1Q15027 740 aa16.95■□□□□ 0.3
SYDE1-204ENST00000600440 POU5F2Q8N7G0 328 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms