RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 LRRC52Q8N7C0 313 aa30.38■■■□□ 2.45
SSBP4-206ENST00000599699 MFSD14AQ96MC6 490 aa30.38■■■□□ 2.45
SSBP4-206ENST00000599699 GSDMAQ96QA5 445 aa30.38■■■□□ 2.45
SSBP4-206ENST00000599699 CGRRF1Q99675 332 aa30.38■■■□□ 2.45
SSBP4-206ENST00000599699 POLIQ9UNA4 740 aa30.38■■■□□ 2.45
SSBP4-206ENST00000599699 PCDHA5Q9Y5H7 936 aa30.38■■■□□ 2.45
SSBP4-206ENST00000599699 OR6C75A6NL08 312 aa30.37■■■□□ 2.45
SSBP4-206ENST00000599699 CCL16O15467 120 aa30.37■■■□□ 2.45
SSBP4-206ENST00000599699 ABLIM3O94929 683 aa30.37■■■□□ 2.45
SSBP4-206ENST00000599699 CEP135Q66GS9 1140 aa30.37■■■□□ 2.45
SSBP4-206ENST00000599699 TPGS2Q68CL5 300 aa30.37■■■□□ 2.45
SSBP4-206ENST00000599699 RNF135Q8IUD6 432 aa30.37■■■□□ 2.45
SSBP4-206ENST00000599699 CYP4F11Q9HBI6 524 aa30.37■■■□□ 2.45
SSBP4-206ENST00000599699 DMAC2Q9NW81 257 aa30.37■■■□□ 2.45
SSBP4-206ENST00000599699 SIX4Q9UIU6 781 aa30.37■■■□□ 2.45
SSBP4-206ENST00000599699 XYLBO75191 536 aa30.36■■■□□ 2.45
SSBP4-206ENST00000599699 CYP11A1P05108 521 aa30.36■■■□□ 2.45
SSBP4-206ENST00000599699 ATF2P15336 505 aa30.36■■■□□ 2.45
SSBP4-206ENST00000599699 TDRD5Q8NAT2 981 aaKnown RBP30.36■■■□□ 2.45
SSBP4-206ENST00000599699 KHSRPQ92945 711 aaKnown RBP eCLIP30.36■■■□□ 2.45
SSBP4-206ENST00000599699 RHOBTB2Q9BYZ6 727 aa30.36■■■□□ 2.45
SSBP4-206ENST00000599699 TRAF3IP3Q9Y228 551 aa30.36■■■□□ 2.45
SSBP4-206ENST00000599699 FRMD4BQ9Y2L6 1034 aa30.36■■■□□ 2.45
SSBP4-206ENST00000599699 MUC3AQ02505 3323 aa30.35■■■□□ 2.45
SSBP4-206ENST00000599699 C2CD4DB7Z1M9 353 aa30.35■■■□□ 2.45
SSBP4-206ENST00000599699 OR4Q2P0C623 313 aa30.35■■■□□ 2.45
SSBP4-206ENST00000599699 HOXA9P31269 272 aa30.35■■■□□ 2.45
SSBP4-206ENST00000599699 UBE2HP62256 183 aa30.35■■■□□ 2.45
SSBP4-206ENST00000599699 ADCY1Q08828 1119 aa30.35■■■□□ 2.45
SSBP4-206ENST00000599699 MYO1EQ12965 1108 aa30.35■■■□□ 2.45
SSBP4-206ENST00000599699 WSCD1Q658N2 575 aa30.35■■■□□ 2.45
SSBP4-206ENST00000599699 SCARA3Q6AZY7 606 aa30.35■■■□□ 2.45
SSBP4-206ENST00000599699 RTL10Q7L3V2 364 aa30.35■■■□□ 2.45
SSBP4-206ENST00000599699 TRAPPC11Q7Z392 1133 aa30.35■■■□□ 2.45
SSBP4-206ENST00000599699 THEM5Q8N1Q8 247 aa30.35■■■□□ 2.45
SSBP4-206ENST00000599699 CXorf38Q8TB03 319 aa30.35■■■□□ 2.45
SSBP4-206ENST00000599699 BORCS6Q96GS4 357 aa30.35■■■□□ 2.45
SSBP4-206ENST00000599699 WDR6Q9NNW5 1121 aaKnown RBP30.35■■■□□ 2.45
SSBP4-206ENST00000599699 AFF4Q9UHB7 1163 aaKnown RBP30.35■■■□□ 2.45
SSBP4-206ENST00000599699 MTCL1Q9Y4B5 1905 aaKnown RBP30.35■■■□□ 2.45
SSBP4-206ENST00000599699 SCN1AP35498 2009 aa30.35■■■□□ 2.45
SSBP4-206ENST00000599699 CLUHO75153 1309 aa30.34■■■□□ 2.45
SSBP4-206ENST00000599699 HUS1O60921 280 aa30.34■■■□□ 2.45
SSBP4-206ENST00000599699 MYBPC2Q14324 1141 aa30.34■■■□□ 2.45
SSBP4-206ENST00000599699 ZNF658Q5TYW1 1059 aaPredicted RBP30.34■■■□□ 2.45
SSBP4-206ENST00000599699 RNF19BQ6ZMZ0 732 aa30.34■■■□□ 2.45
SSBP4-206ENST00000599699 ELOA2Q8IYF1 753 aaPredicted RBP30.34■■■□□ 2.45
SSBP4-206ENST00000599699 TMEM174Q8WUU8 243 aa30.34■■■□□ 2.45
SSBP4-206ENST00000599699 ACSF2Q96CM8 615 aaPredicted RBP30.34■■■□□ 2.45
SSBP4-206ENST00000599699 HPDLQ96IR7 371 aa30.34■■■□□ 2.45
SSBP4-206ENST00000599699 PAPLNO95428 1278 aa30.33■■■□□ 2.45
SSBP4-206ENST00000599699 LRG1P02750 347 aa30.33■■■□□ 2.45
SSBP4-206ENST00000599699 NR2F2P24468 414 aa30.33■■■□□ 2.45
SSBP4-206ENST00000599699 CASP4P49662 377 aa30.33■■■□□ 2.45
SSBP4-206ENST00000599699 OTOP3Q7RTS5 596 aa30.33■■■□□ 2.45
SSBP4-206ENST00000599699 GRASPQ7Z6J2 395 aaPredicted RBP30.33■■■□□ 2.45
SSBP4-206ENST00000599699 TCEAL8Q8IYN2 117 aa30.33■■■□□ 2.45
SSBP4-206ENST00000599699 PGLYRP2Q96PD5 576 aa30.33■■■□□ 2.45
SSBP4-206ENST00000599699 USTQ9Y2C2 406 aa30.33■■■□□ 2.45
SSBP4-206ENST00000599699 SNX9Q9Y5X1 595 aa30.33■■■□□ 2.45
SSBP4-206ENST00000599699 PHACTR2O75167 634 aa30.32■■■□□ 2.44
SSBP4-206ENST00000599699 SEC24AO95486 1093 aa30.32■■■□□ 2.44
SSBP4-206ENST00000599699 RPL13P26373 211 aaKnown RBP30.32■■■□□ 2.44
SSBP4-206ENST00000599699 SPATA20Q8TB22 786 aa30.32■■■□□ 2.44
SSBP4-206ENST00000599699 GTPBP4Q9BZE4 634 aaKnown RBP30.32■■■□□ 2.44
SSBP4-206ENST00000599699 MUTYHQ9UIF7 546 aa30.32■■■□□ 2.44
SSBP4-206ENST00000599699 MAFFQ9ULX9 164 aa30.32■■■□□ 2.44
SSBP4-206ENST00000599699 ALADP13716 330 aa30.31■■■□□ 2.44
SSBP4-206ENST00000599699 PRCPP42785 496 aa30.31■■■□□ 2.44
SSBP4-206ENST00000599699 GPR17Q13304 367 aa30.31■■■□□ 2.44
SSBP4-206ENST00000599699 TRPC3Q13507 836 aa30.31■■■□□ 2.44
SSBP4-206ENST00000599699 ISM2Q6H9L7 571 aa30.31■■■□□ 2.44
SSBP4-206ENST00000599699 PDCL2Q8N4E4 241 aa30.31■■■□□ 2.44
SSBP4-206ENST00000599699 PARD3BQ8TEW8 1205 aa30.31■■■□□ 2.44
SSBP4-206ENST00000599699 ZNF516Q92618 1163 aa30.31■■■□□ 2.44
SSBP4-206ENST00000599699 TMEM209Q96SK2 561 aa30.31■■■□□ 2.44
SSBP4-206ENST00000599699 GZF1Q9H116 711 aaPredicted RBP30.31■■■□□ 2.44
SSBP4-206ENST00000599699 EPHX3Q9H6B9 360 aa30.31■■■□□ 2.44
SSBP4-206ENST00000599699 GDAP2Q9NXN4 497 aa30.31■■■□□ 2.44
SSBP4-206ENST00000599699 INSL5Q9Y5Q6 135 aa30.31■■■□□ 2.44
SSBP4-206ENST00000599699 DCXO43602 365 aa30.3■■■□□ 2.44
SSBP4-206ENST00000599699 GBP2P32456 591 aaPredicted RBP30.3■■■□□ 2.44
SSBP4-206ENST00000599699 BIRC3Q13489 604 aa30.3■■■□□ 2.44
SSBP4-206ENST00000599699 NFIL3Q16649 462 aa30.3■■■□□ 2.44
SSBP4-206ENST00000599699 PLCD3Q8N3E9 789 aa30.3■■■□□ 2.44
SSBP4-206ENST00000599699 OR10T2Q8NGX3 314 aa30.3■■■□□ 2.44
SSBP4-206ENST00000599699 PLEKHO2Q8TD55 490 aa30.3■■■□□ 2.44
SSBP4-206ENST00000599699 L1RE1Q9UN81 338 aa30.3■■■□□ 2.44
SSBP4-206ENST00000599699 C2orf16Q68DN1 1984 aa30.3■■■□□ 2.44
SSBP4-206ENST00000599699 LRRIQ3A6PVS8 624 aaPredicted RBP30.29■■■□□ 2.44
SSBP4-206ENST00000599699 PI4K2BG5E9Z4 385 aa30.29■■■□□ 2.44
SSBP4-206ENST00000599699 CLSTN1O94985 981 aa30.29■■■□□ 2.44
SSBP4-206ENST00000599699 AP3M2P53677 418 aa30.29■■■□□ 2.44
SSBP4-206ENST00000599699 NTHL1P78549 312 aa30.29■■■□□ 2.44
SSBP4-206ENST00000599699 ADAM9Q13443 819 aa30.29■■■□□ 2.44
SSBP4-206ENST00000599699 SLC39A12Q504Y0 691 aa30.29■■■□□ 2.44
SSBP4-206ENST00000599699 GET4Q7L5D6 327 aaPredicted RBP30.29■■■□□ 2.44
SSBP4-206ENST00000599699 RTP3Q9BQQ7 232 aa30.29■■■□□ 2.44
SSBP4-206ENST00000599699 CST3P01034 146 aaPredicted RBP30.28■■■□□ 2.44
SSBP4-206ENST00000599699 POU2F2P09086 479 aa30.28■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms