RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 C2orf16Q68DN1 1984 aa16.29■□□□□ 0.2
LIG1-215ENST00000597901 DENND4AQ7Z401 1863 aa16.29■□□□□ 0.2
LIG1-215ENST00000597901 ZNF197O14709 1029 aa16.29■□□□□ 0.2
LIG1-215ENST00000597901 MICAL2O94851 1124 aa16.29■□□□□ 0.2
LIG1-215ENST00000597901 HOXD13P35453 343 aa16.29■□□□□ 0.2
LIG1-215ENST00000597901 TAF6P49848 677 aa16.29■□□□□ 0.2
LIG1-215ENST00000597901 ASIC1P78348 528 aa16.29■□□□□ 0.2
LIG1-215ENST00000597901 TFAMQ00059 246 aaKnown RBP16.29■□□□□ 0.2
LIG1-215ENST00000597901 PRSS36Q5K4E3 855 aa16.29■□□□□ 0.2
LIG1-215ENST00000597901 CYP4A22Q5TCH4 519 aa16.29■□□□□ 0.2
LIG1-215ENST00000597901 IQCEQ6IPM2 695 aa16.29■□□□□ 0.2
LIG1-215ENST00000597901 CENPPQ6IPU0 288 aa16.29■□□□□ 0.2
LIG1-215ENST00000597901 MTSS1LQ765P7 747 aa16.29■□□□□ 0.2
LIG1-215ENST00000597901 BRSK2Q8IWQ3 736 aa16.29■□□□□ 0.2
LIG1-215ENST00000597901 HS6ST3Q8IZP7 471 aa16.29■□□□□ 0.2
LIG1-215ENST00000597901 ELMOD1Q8N336 334 aa16.29■□□□□ 0.2
LIG1-215ENST00000597901 ZNF507Q8TCN5 953 aa16.29■□□□□ 0.2
LIG1-215ENST00000597901 CACTINQ8WUQ7 758 aaKnown RBP16.29■□□□□ 0.2
LIG1-215ENST00000597901 TCEAL4Q96EI5 215 aa16.29■□□□□ 0.2
LIG1-215ENST00000597901 TMEM209Q96SK2 561 aa16.29■□□□□ 0.2
LIG1-215ENST00000597901 CRISPLD1Q9H336 500 aa16.29■□□□□ 0.2
LIG1-215ENST00000597901 SLC2A4RGQ9NR83 387 aa16.29■□□□□ 0.2
LIG1-215ENST00000597901 RBAKQ9NYW8 714 aaPredicted RBP16.29■□□□□ 0.2
LIG1-215ENST00000597901 SLC27A5Q9Y2P5 690 aa16.29■□□□□ 0.2
LIG1-215ENST00000597901 KPNA7A9QM74 516 aa16.28■□□□□ 0.2
LIG1-215ENST00000597901 STK25O00506 426 aa16.28■□□□□ 0.2
LIG1-215ENST00000597901 GALR2O43603 387 aaPredicted RBP16.28■□□□□ 0.2
LIG1-215ENST00000597901 AOC1P19801 751 aa16.28■□□□□ 0.2
LIG1-215ENST00000597901 CWF19L1Q69YN2 538 aaKnown RBP16.28■□□□□ 0.2
LIG1-215ENST00000597901 EPM2AIP1Q7L775 607 aaPredicted RBP16.28■□□□□ 0.2
LIG1-215ENST00000597901 METTL23Q86XA0 190 aa16.28■□□□□ 0.2
LIG1-215ENST00000597901 THEM5Q8N1Q8 247 aa16.28■□□□□ 0.2
LIG1-215ENST00000597901 GPD1LQ8N335 351 aa16.28■□□□□ 0.2
LIG1-215ENST00000597901 ATAD1Q8NBU5 361 aa16.28■□□□□ 0.2
LIG1-215ENST00000597901 NOC3LQ8WTT2 800 aaKnown RBP16.28■□□□□ 0.2
LIG1-215ENST00000597901 ATOH1Q92858 354 aaPredicted RBP16.28■□□□□ 0.2
LIG1-215ENST00000597901 PYM1Q9BRP8 204 aaKnown RBP16.28■□□□□ 0.2
LIG1-215ENST00000597901 BLZF1Q9H2G9 400 aa16.28■□□□□ 0.2
LIG1-215ENST00000597901 MAGEF1Q9HAY2 307 aa16.28■□□□□ 0.2
LIG1-215ENST00000597901 PDE11AQ9HCR9 933 aa16.28■□□□□ 0.2
LIG1-215ENST00000597901 DSEQ9UL01 958 aa16.28■□□□□ 0.2
LIG1-215ENST00000597901 CA14Q9ULX7 337 aa16.28■□□□□ 0.2
LIG1-215ENST00000597901 AGAP1Q9UPQ3 857 aa16.28■□□□□ 0.2
LIG1-215ENST00000597901 ZDHHC9Q9Y397 364 aa16.28■□□□□ 0.2
LIG1-215ENST00000597901 MUC6Q6W4X9 2439 aa16.28■□□□□ 0.2
LIG1-215ENST00000597901 KIAA0391O15091 583 aaKnown RBP16.27■□□□□ 0.2
LIG1-215ENST00000597901 CEBPBP17676 345 aa16.27■□□□□ 0.2
LIG1-215ENST00000597901 CASP1P29466 404 aa16.27■□□□□ 0.2
LIG1-215ENST00000597901 CCR2P41597 374 aa16.27■□□□□ 0.2
LIG1-215ENST00000597901 AFMP43652 599 aa16.27■□□□□ 0.2
LIG1-215ENST00000597901 FAM26FQ5R3K3 315 aa16.27■□□□□ 0.2
LIG1-215ENST00000597901 WSCD1Q658N2 575 aa16.27■□□□□ 0.2
LIG1-215ENST00000597901 SCARA3Q6AZY7 606 aa16.27■□□□□ 0.2
LIG1-215ENST00000597901 UNC13DQ70J99 1090 aa16.27■□□□□ 0.2
LIG1-215ENST00000597901 PDZD4Q76G19 769 aaPredicted RBP16.27■□□□□ 0.2
LIG1-215ENST00000597901 CSGALNACT2Q8N6G5 542 aa16.27■□□□□ 0.2
LIG1-215ENST00000597901 OR10T2Q8NGX3 314 aa16.27■□□□□ 0.2
LIG1-215ENST00000597901 KXD1Q9BQD3 176 aa16.27■□□□□ 0.2
LIG1-215ENST00000597901 RTP3Q9BQQ7 232 aa16.27■□□□□ 0.2
LIG1-215ENST00000597901 PLA2G2FQ9BZM2 168 aa16.27■□□□□ 0.2
LIG1-215ENST00000597901 ZCWPW1Q9H0M4 648 aa16.27■□□□□ 0.2
LIG1-215ENST00000597901 YIPF1Q9Y548 306 aa16.27■□□□□ 0.2
LIG1-215ENST00000597901 CITO14578 2027 aa16.27■□□□□ 0.2
LIG1-215ENST00000597901 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.26■□□□□ 0.19
LIG1-215ENST00000597901 PVALEFA0A1B0GWK0 134 aa16.26■□□□□ 0.19
LIG1-215ENST00000597901 MTMR11A4FU01 709 aa16.26■□□□□ 0.19
LIG1-215ENST00000597901 ZNF233A6NK53 670 aa16.26■□□□□ 0.19
LIG1-215ENST00000597901 H0Y858 1186 aa16.26■□□□□ 0.19
LIG1-215ENST00000597901 NRG2O14511 850 aaPredicted RBP16.26■□□□□ 0.19
LIG1-215ENST00000597901 EIF3DO15371 548 aaKnown RBP eCLIP16.26■□□□□ 0.19
LIG1-215ENST00000597901 TGFB1I1O43294 461 aa16.26■□□□□ 0.19
LIG1-215ENST00000597901 MOSPD3O75425 235 aa16.26■□□□□ 0.19
LIG1-215ENST00000597901 ECI2O75521 394 aa16.26■□□□□ 0.19
LIG1-215ENST00000597901 MYL4P12829 197 aa16.26■□□□□ 0.19
LIG1-215ENST00000597901 RFX1P22670 979 aa16.26■□□□□ 0.19
LIG1-215ENST00000597901 PNPLA4P41247 253 aa16.26■□□□□ 0.19
LIG1-215ENST00000597901 ALDH1A3P47895 512 aa16.26■□□□□ 0.19
LIG1-215ENST00000597901 EPHB3P54753 998 aa16.26■□□□□ 0.19
LIG1-215ENST00000597901 EPHA5P54756 1037 aa16.26■□□□□ 0.19
LIG1-215ENST00000597901 EHHADHQ08426 723 aa16.26■□□□□ 0.19
LIG1-215ENST00000597901 CUL4BQ13620 913 aa16.26■□□□□ 0.19
LIG1-215ENST00000597901 SV2CQ496J9 727 aa16.26■□□□□ 0.19
LIG1-215ENST00000597901 TANGO2Q6ICL3 276 aa16.26■□□□□ 0.19
LIG1-215ENST00000597901 LRRTM3Q86VH5 581 aa16.26■□□□□ 0.19
LIG1-215ENST00000597901 C1orf127Q8N9H9 656 aa16.26■□□□□ 0.19
LIG1-215ENST00000597901 CXorf38Q8TB03 319 aa16.26■□□□□ 0.19
LIG1-215ENST00000597901 ZSWIM3Q96MP5 696 aa16.26■□□□□ 0.19
LIG1-215ENST00000597901 LRRC3Q9BY71 257 aa16.26■□□□□ 0.19
LIG1-215ENST00000597901 SERTAD1Q9UHV2 236 aa16.26■□□□□ 0.19
LIG1-215ENST00000597901 ITGB3P05106 788 aa16.25■□□□□ 0.19
LIG1-215ENST00000597901 SLFN14P0C7P3 912 aa16.25■□□□□ 0.19
LIG1-215ENST00000597901 GJA1P17302 382 aa16.25■□□□□ 0.19
LIG1-215ENST00000597901 CMA1P23946 247 aa16.25■□□□□ 0.19
LIG1-215ENST00000597901 POLR2BP30876 1174 aaKnown RBP16.25■□□□□ 0.19
LIG1-215ENST00000597901 TUFMP49411 452 aaKnown RBP16.25■□□□□ 0.19
LIG1-215ENST00000597901 RBP5P82980 135 aa16.25■□□□□ 0.19
LIG1-215ENST00000597901 PLD1Q13393 1074 aa16.25■□□□□ 0.19
LIG1-215ENST00000597901 SLC39A12Q504Y0 691 aa16.25■□□□□ 0.19
LIG1-215ENST00000597901 SLC44A4Q53GD3 710 aa16.25■□□□□ 0.19
LIG1-215ENST00000597901 FAM78AQ5JUQ0 283 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms