RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 SRGAP2BP0DMP2 458 aa13.01□□□□□ -0.33
SHKBP1-213ENST00000597325 ITGA4P13612 1032 aa13.01□□□□□ -0.33
SHKBP1-213ENST00000597325 TNNI1P19237 187 aa13.01□□□□□ -0.33
SHKBP1-213ENST00000597325 TGM1P22735 817 aa13.01□□□□□ -0.33
SHKBP1-213ENST00000597325 ENOX2Q16206 610 aaKnown RBP13.01□□□□□ -0.33
SHKBP1-213ENST00000597325 VWA3BQ502W6 1294 aa13.01□□□□□ -0.33
SHKBP1-213ENST00000597325 CRELD2Q6UXH1 353 aaPredicted RBP13.01□□□□□ -0.33
SHKBP1-213ENST00000597325 CD302Q8IX05 232 aa13.01□□□□□ -0.33
SHKBP1-213ENST00000597325 GPR161Q8N6U8 529 aaKnown RBP13.01□□□□□ -0.33
SHKBP1-213ENST00000597325 RNF169Q8NCN4 708 aa13.01□□□□□ -0.33
SHKBP1-213ENST00000597325 MICAL1Q8TDZ2 1067 aa13.01□□□□□ -0.33
SHKBP1-213ENST00000597325 SLC35C1Q96A29 364 aa13.01□□□□□ -0.33
SHKBP1-213ENST00000597325 CGRRF1Q99675 332 aa13.01□□□□□ -0.33
SHKBP1-213ENST00000597325 TRAIPQ9BWF2 469 aa13.01□□□□□ -0.33
SHKBP1-213ENST00000597325 ADAM7Q9H2U9 754 aa13.01□□□□□ -0.33
SHKBP1-213ENST00000597325 NDST4Q9H3R1 872 aa13.01□□□□□ -0.33
SHKBP1-213ENST00000597325 MMRN2Q9H8L6 949 aa13.01□□□□□ -0.33
SHKBP1-213ENST00000597325 RNF216Q9NWF9 866 aaPredicted RBP13.01□□□□□ -0.33
SHKBP1-213ENST00000597325 SNTG2Q9NY99 539 aa13.01□□□□□ -0.33
SHKBP1-213ENST00000597325 HES2Q9Y543 173 aa13.01□□□□□ -0.33
SHKBP1-213ENST00000597325 A0A0U1RQF3 1178 aa13□□□□□ -0.33
SHKBP1-213ENST00000597325 A0A1B0GTH6 734 aa13□□□□□ -0.33
SHKBP1-213ENST00000597325 AP3M2P53677 418 aa13□□□□□ -0.33
SHKBP1-213ENST00000597325 MYL7Q01449 175 aa13□□□□□ -0.33
SHKBP1-213ENST00000597325 UBXN1Q04323 297 aa13□□□□□ -0.33
SHKBP1-213ENST00000597325 ITIH3Q06033 890 aa13□□□□□ -0.33
SHKBP1-213ENST00000597325 CETN1Q12798 172 aa13□□□□□ -0.33
SHKBP1-213ENST00000597325 KCNH2Q12809 1159 aa13□□□□□ -0.33
SHKBP1-213ENST00000597325 MIIPQ5JXC2 388 aa13□□□□□ -0.33
SHKBP1-213ENST00000597325 VARS2Q5ST30 1063 aaKnown RBP13□□□□□ -0.33
SHKBP1-213ENST00000597325 SLC24A5Q71RS6 500 aa13□□□□□ -0.33
SHKBP1-213ENST00000597325 WDR49Q8IV35 697 aa13□□□□□ -0.33
SHKBP1-213ENST00000597325 SIX5Q8N196 739 aa13□□□□□ -0.33
SHKBP1-213ENST00000597325 PLCD3Q8N3E9 789 aa13□□□□□ -0.33
SHKBP1-213ENST00000597325 SMG8Q8ND04 991 aaKnown RBP13□□□□□ -0.33
SHKBP1-213ENST00000597325 PARD3BQ8TEW8 1205 aa13□□□□□ -0.33
SHKBP1-213ENST00000597325 BORCS6Q96GS4 357 aa13□□□□□ -0.33
SHKBP1-213ENST00000597325 RPS6KC1Q96S38 1066 aa13□□□□□ -0.33
SHKBP1-213ENST00000597325 XPO4Q9C0E2 1151 aaKnown RBP13□□□□□ -0.33
SHKBP1-213ENST00000597325 PLEKHA5Q9HAU0 1116 aa13□□□□□ -0.33
SHKBP1-213ENST00000597325 PDE11AQ9HCR9 933 aa13□□□□□ -0.33
SHKBP1-213ENST00000597325 UBN1Q9NPG3 1134 aa13□□□□□ -0.33
SHKBP1-213ENST00000597325 RGS18Q9NS28 235 aa13□□□□□ -0.33
SHKBP1-213ENST00000597325 DLGAP2Q9P1A6 1054 aa13□□□□□ -0.33
SHKBP1-213ENST00000597325 DUSP12Q9UNI6 340 aa13□□□□□ -0.33
SHKBP1-213ENST00000597325 USTQ9Y2C2 406 aa13□□□□□ -0.33
SHKBP1-213ENST00000597325 LAMA1P25391 3075 aa12.99□□□□□ -0.33
SHKBP1-213ENST00000597325 LRRC10BA6NIK2 292 aa12.99□□□□□ -0.33
SHKBP1-213ENST00000597325 LRRIQ3A6PVS8 624 aaPredicted RBP12.99□□□□□ -0.33
SHKBP1-213ENST00000597325 ZNF623O75123 536 aa12.99□□□□□ -0.33
SHKBP1-213ENST00000597325 TNNC2P02585 160 aa12.99□□□□□ -0.33
SHKBP1-213ENST00000597325 TMEM191BP0C7N4 346 aa12.99□□□□□ -0.33
SHKBP1-213ENST00000597325 AKAP5P24588 427 aa12.99□□□□□ -0.33
SHKBP1-213ENST00000597325 GTF2H1P32780 548 aa12.99□□□□□ -0.33
SHKBP1-213ENST00000597325 MXI1P50539 228 aa12.99□□□□□ -0.33
SHKBP1-213ENST00000597325 LMNB2Q03252 620 aa12.99□□□□□ -0.33
SHKBP1-213ENST00000597325 TMEM132DQ14C87 1099 aa12.99□□□□□ -0.33
SHKBP1-213ENST00000597325 PAN2Q504Q3 1202 aaKnown RBP12.99□□□□□ -0.33
SHKBP1-213ENST00000597325 PDE12Q6L8Q7 609 aaKnown RBP12.99□□□□□ -0.33
SHKBP1-213ENST00000597325 LLGL2Q6P1M3 1020 aa12.99□□□□□ -0.33
SHKBP1-213ENST00000597325 APTXQ7Z2E3 356 aaKnown RBP12.99□□□□□ -0.33
SHKBP1-213ENST00000597325 RTN4RL1Q86UN2 441 aaPredicted RBP12.99□□□□□ -0.33
SHKBP1-213ENST00000597325 ECHDC2Q86YB7 292 aa12.99□□□□□ -0.33
SHKBP1-213ENST00000597325 TDRD5Q8NAT2 981 aaKnown RBP12.99□□□□□ -0.33
SHKBP1-213ENST00000597325 ANKRD36BP1Q96IX9 119 aa12.99□□□□□ -0.33
SHKBP1-213ENST00000597325 ASB7Q9H672 318 aa12.99□□□□□ -0.33
SHKBP1-213ENST00000597325 RTN4Q9NQC3 1192 aaKnown RBP12.99□□□□□ -0.33
SHKBP1-213ENST00000597325 LRFN2Q9ULH4 789 aa12.99□□□□□ -0.33
SHKBP1-213ENST00000597325 MAST4O15021 2626 aa12.99□□□□□ -0.33
SHKBP1-213ENST00000597325 DENND4AQ7Z401 1863 aa12.99□□□□□ -0.33
SHKBP1-213ENST00000597325 ITPR1Q14643 2758 aa12.98□□□□□ -0.33
SHKBP1-213ENST00000597325 TTC26A0AVF1 554 aa12.98□□□□□ -0.33
SHKBP1-213ENST00000597325 KRBA1A5PL33 1030 aa12.98□□□□□ -0.33
SHKBP1-213ENST00000597325 LACTBL1A8MY62 500 aa12.98□□□□□ -0.33
SHKBP1-213ENST00000597325 C9IYK1 514 aa12.98□□□□□ -0.33
SHKBP1-213ENST00000597325 XPOTO43592 962 aaKnown RBP12.98□□□□□ -0.33
SHKBP1-213ENST00000597325 PHACTR2O75167 634 aa12.98□□□□□ -0.33
SHKBP1-213ENST00000597325 CLSTN1O94985 981 aa12.98□□□□□ -0.33
SHKBP1-213ENST00000597325 ADCY5O95622 1261 aa12.98□□□□□ -0.33
SHKBP1-213ENST00000597325 EOMESO95936 686 aa12.98□□□□□ -0.33
SHKBP1-213ENST00000597325 GCLMP48507 274 aa12.98□□□□□ -0.33
SHKBP1-213ENST00000597325 FMO5P49326 533 aa12.98□□□□□ -0.33
SHKBP1-213ENST00000597325 ZNF75DP51815 510 aa12.98□□□□□ -0.33
SHKBP1-213ENST00000597325 DLG4P78352 724 aa12.98□□□□□ -0.33
SHKBP1-213ENST00000597325 TFAMQ00059 246 aaKnown RBP12.98□□□□□ -0.33
SHKBP1-213ENST00000597325 BIRC3Q13489 604 aa12.98□□□□□ -0.33
SHKBP1-213ENST00000597325 SLC10A6Q3KNW5 377 aa12.98□□□□□ -0.33
SHKBP1-213ENST00000597325 PPM1JQ5JR12 505 aa12.98□□□□□ -0.33
SHKBP1-213ENST00000597325 MRPL10Q7Z7H8 261 aaKnown RBP12.98□□□□□ -0.33
SHKBP1-213ENST00000597325 NT5DC4Q86YG4 428 aa12.98□□□□□ -0.33
SHKBP1-213ENST00000597325 MAML2Q8IZL2 1156 aaPredicted RBP12.98□□□□□ -0.33
SHKBP1-213ENST00000597325 PLEKHO2Q8TD55 490 aa12.98□□□□□ -0.33
SHKBP1-213ENST00000597325 CACTINQ8WUQ7 758 aaKnown RBP12.98□□□□□ -0.33
SHKBP1-213ENST00000597325 KIF12Q96FN5 646 aa12.98□□□□□ -0.33
SHKBP1-213ENST00000597325 MRFAP1L1Q96HT8 127 aa12.98□□□□□ -0.33
SHKBP1-213ENST00000597325 PCMTD1Q96MG8 357 aaPredicted RBP12.98□□□□□ -0.33
SHKBP1-213ENST00000597325 NAP1L5Q96NT1 182 aaPredicted RBP12.98□□□□□ -0.33
SHKBP1-213ENST00000597325 TSPAN18Q96SJ8 248 aa12.98□□□□□ -0.33
SHKBP1-213ENST00000597325 RSAD1Q9HA92 442 aa12.98□□□□□ -0.33
SHKBP1-213ENST00000597325 TMEM8AQ9HCN3 771 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms