RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 GOLGA6L19H0YKK7 550 aa16.65■□□□□ 0.26
SMCO4-206ENST00000596676 ADAM12O43184 909 aa16.65■□□□□ 0.26
SMCO4-206ENST00000596676 LILRB3O75022 631 aa16.65■□□□□ 0.26
SMCO4-206ENST00000596676 CAVIN2O95810 425 aa16.65■□□□□ 0.26
SMCO4-206ENST00000596676 ATICP31939 592 aa16.65■□□□□ 0.26
SMCO4-206ENST00000596676 PNPLA4P41247 253 aa16.65■□□□□ 0.26
SMCO4-206ENST00000596676 KCNMA1Q12791 1236 aa16.65■□□□□ 0.26
SMCO4-206ENST00000596676 MYO1EQ12965 1108 aa16.65■□□□□ 0.26
SMCO4-206ENST00000596676 SGSM1Q2NKQ1 1148 aa16.65■□□□□ 0.26
SMCO4-206ENST00000596676 USP41Q3LFD5 358 aa16.65■□□□□ 0.26
SMCO4-206ENST00000596676 GLYCTKQ8IVS8 523 aa16.65■□□□□ 0.26
SMCO4-206ENST00000596676 ARHGEF19Q8IW93 802 aa16.65■□□□□ 0.26
SMCO4-206ENST00000596676 PDCL2Q8N4E4 241 aa16.65■□□□□ 0.26
SMCO4-206ENST00000596676 DEFB123Q8N688 67 aa16.65■□□□□ 0.26
SMCO4-206ENST00000596676 EHBP1Q8NDI1 1231 aa16.65■□□□□ 0.26
SMCO4-206ENST00000596676 LNX1Q8TBB1 728 aaPredicted RBP16.65■□□□□ 0.26
SMCO4-206ENST00000596676 MICAL1Q8TDZ2 1067 aa16.65■□□□□ 0.26
SMCO4-206ENST00000596676 MYLIPQ8WY64 445 aa16.65■□□□□ 0.26
SMCO4-206ENST00000596676 KAT5Q92993 513 aa16.65■□□□□ 0.26
SMCO4-206ENST00000596676 GUCD1Q96NT3 240 aa16.65■□□□□ 0.26
SMCO4-206ENST00000596676 TMEM209Q96SK2 561 aa16.65■□□□□ 0.26
SMCO4-206ENST00000596676 MMS19Q96T76 1030 aa16.65■□□□□ 0.26
SMCO4-206ENST00000596676 RTP3Q9BQQ7 232 aa16.65■□□□□ 0.26
SMCO4-206ENST00000596676 MRPL45Q9BRJ2 306 aaKnown RBP16.65■□□□□ 0.26
SMCO4-206ENST00000596676 TTPALQ9BTX7 342 aa16.65■□□□□ 0.26
SMCO4-206ENST00000596676 ENTPD7Q9NQZ7 604 aa16.65■□□□□ 0.26
SMCO4-206ENST00000596676 GDAP2Q9NXN4 497 aa16.65■□□□□ 0.26
SMCO4-206ENST00000596676 LZTS1Q9Y250 596 aa16.65■□□□□ 0.26
SMCO4-206ENST00000596676 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.65■□□□□ 0.26
SMCO4-206ENST00000596676 LRRC10BA6NIK2 292 aa16.64■□□□□ 0.25
SMCO4-206ENST00000596676 PMM2O15305 246 aa16.64■□□□□ 0.25
SMCO4-206ENST00000596676 AP5Z1O43299 807 aa16.64■□□□□ 0.25
SMCO4-206ENST00000596676 TRAPPC3O43617 180 aa16.64■□□□□ 0.25
SMCO4-206ENST00000596676 STAU1O95793 577 aaKnown RBP16.64■□□□□ 0.25
SMCO4-206ENST00000596676 WEE2P0C1S8 567 aa16.64■□□□□ 0.25
SMCO4-206ENST00000596676 CTSAP10619 480 aa16.64■□□□□ 0.25
SMCO4-206ENST00000596676 GLUD2P49448 558 aa16.64■□□□□ 0.25
SMCO4-206ENST00000596676 NOP14P78316 857 aaKnown RBP16.64■□□□□ 0.25
SMCO4-206ENST00000596676 FANCCQ00597 558 aa16.64■□□□□ 0.25
SMCO4-206ENST00000596676 UBE3AQ05086 875 aa16.64■□□□□ 0.25
SMCO4-206ENST00000596676 PTPN14Q15678 1187 aa16.64■□□□□ 0.25
SMCO4-206ENST00000596676 ZNF667Q5HYK9 610 aa16.64■□□□□ 0.25
SMCO4-206ENST00000596676 VARS2Q5ST30 1063 aaKnown RBP16.64■□□□□ 0.25
SMCO4-206ENST00000596676 KIAA1841Q6NSI8 718 aa16.64■□□□□ 0.25
SMCO4-206ENST00000596676 DPY19L2P1Q6NXN4 242 aa16.64■□□□□ 0.25
SMCO4-206ENST00000596676 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.64■□□□□ 0.25
SMCO4-206ENST00000596676 LIMS2Q7Z4I7 341 aa16.64■□□□□ 0.25
SMCO4-206ENST00000596676 RBM23Q86U06 439 aaKnown RBP16.64■□□□□ 0.25
SMCO4-206ENST00000596676 KBTBD7Q8WVZ9 684 aa16.64■□□□□ 0.25
SMCO4-206ENST00000596676 CDX2Q99626 313 aaPredicted RBP16.64■□□□□ 0.25
SMCO4-206ENST00000596676 ARID3AQ99856 593 aa16.64■□□□□ 0.25
SMCO4-206ENST00000596676 LPIN3Q9BQK8 851 aa16.64■□□□□ 0.25
SMCO4-206ENST00000596676 GCNT4Q9P109 453 aa16.64■□□□□ 0.25
SMCO4-206ENST00000596676 AJAP1Q9UKB5 411 aaPredicted RBP16.64■□□□□ 0.25
SMCO4-206ENST00000596676 CDH23Q9H251 3354 aa16.64■□□□□ 0.25
SMCO4-206ENST00000596676 TSC2P49815 1807 aa16.63■□□□□ 0.25
SMCO4-206ENST00000596676 C2orf71A6NGG8 1288 aa16.63■□□□□ 0.25
SMCO4-206ENST00000596676 PER2O15055 1255 aa16.63■□□□□ 0.25
SMCO4-206ENST00000596676 ODC1P11926 461 aa16.63■□□□□ 0.25
SMCO4-206ENST00000596676 IGFBP4P22692 258 aa16.63■□□□□ 0.25
SMCO4-206ENST00000596676 ACAT1P24752 427 aaKnown RBP16.63■□□□□ 0.25
SMCO4-206ENST00000596676 LMO2P25791 158 aa16.63■□□□□ 0.25
SMCO4-206ENST00000596676 GTF2F1P35269 517 aaKnown RBP eCLIP16.63■□□□□ 0.25
SMCO4-206ENST00000596676 ASPAP45381 313 aa16.63■□□□□ 0.25
SMCO4-206ENST00000596676 DSG1Q02413 1049 aa16.63■□□□□ 0.25
SMCO4-206ENST00000596676 MRPL58Q14197 206 aaKnown RBP16.63■□□□□ 0.25
SMCO4-206ENST00000596676 CCDC142Q17RM4 750 aa16.63■□□□□ 0.25
SMCO4-206ENST00000596676 PHLDB3Q6NSJ2 640 aa16.63■□□□□ 0.25
SMCO4-206ENST00000596676 MRPL38Q96DV4 380 aaKnown RBP16.63■□□□□ 0.25
SMCO4-206ENST00000596676 VRTNQ9H8Y1 702 aa16.63■□□□□ 0.25
SMCO4-206ENST00000596676 SIX2Q9NPC8 291 aa16.63■□□□□ 0.25
SMCO4-206ENST00000596676 MTCH2Q9Y6C9 303 aa16.63■□□□□ 0.25
SMCO4-206ENST00000596676 PRRC2BQ5JSZ5 2229 aaKnown RBP16.62■□□□□ 0.25
SMCO4-206ENST00000596676 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.62■□□□□ 0.25
SMCO4-206ENST00000596676 CARNS1A5YM72 827 aa16.62■□□□□ 0.25
SMCO4-206ENST00000596676 LGALS16A8MUM7 142 aa16.62■□□□□ 0.25
SMCO4-206ENST00000596676 P4HA2O15460 535 aa16.62■□□□□ 0.25
SMCO4-206ENST00000596676 HUS1O60921 280 aa16.62■□□□□ 0.25
SMCO4-206ENST00000596676 N4BP1O75113 896 aaKnown RBP16.62■□□□□ 0.25
SMCO4-206ENST00000596676 CYP11A1P05108 521 aa16.62■□□□□ 0.25
SMCO4-206ENST00000596676 URODP06132 367 aa16.62■□□□□ 0.25
SMCO4-206ENST00000596676 CNPP09543 421 aaKnown RBP16.62■□□□□ 0.25
SMCO4-206ENST00000596676 PDGFRBP09619 1106 aa16.62■□□□□ 0.25
SMCO4-206ENST00000596676 OR4Q2P0C623 313 aa16.62■□□□□ 0.25
SMCO4-206ENST00000596676 PON1P27169 355 aa16.62■□□□□ 0.25
SMCO4-206ENST00000596676 TNNC1P63316 161 aa16.62■□□□□ 0.25
SMCO4-206ENST00000596676 ELAVL2Q12926 359 aaKnown RBP16.62■□□□□ 0.25
SMCO4-206ENST00000596676 ORC1Q13415 861 aa16.62■□□□□ 0.25
SMCO4-206ENST00000596676 PSMD5Q16401 504 aa16.62■□□□□ 0.25
SMCO4-206ENST00000596676 OVOS1Q6IE37 1185 aa16.62■□□□□ 0.25
SMCO4-206ENST00000596676 GBP6Q6ZN66 633 aa16.62■□□□□ 0.25
SMCO4-206ENST00000596676 RRAGAQ7L523 313 aa16.62■□□□□ 0.25
SMCO4-206ENST00000596676 ADGRF2Q8IZF7 708 aa16.62■□□□□ 0.25
SMCO4-206ENST00000596676 MRPL43Q8N983 215 aaKnown RBP16.62■□□□□ 0.25
SMCO4-206ENST00000596676 APPL2Q8NEU8 664 aa16.62■□□□□ 0.25
SMCO4-206ENST00000596676 PIK3R5Q8WYR1 880 aa16.62■□□□□ 0.25
SMCO4-206ENST00000596676 TAF4BQ92750 862 aa16.62■□□□□ 0.25
SMCO4-206ENST00000596676 CLSTN3Q9BQT9 956 aa16.62■□□□□ 0.25
SMCO4-206ENST00000596676 RTN4Q9NQC3 1192 aaKnown RBP16.62■□□□□ 0.25
SMCO4-206ENST00000596676 MRPL17Q9NRX2 175 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms