RNA–Protein interactions for RNA: ENST00000596644.5

IRF3-211, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-211ENST00000596644 CXorf38Q8TB03 319 aa16.14■□□□□ 0.17
IRF3-211ENST00000596644 PLEKHO2Q8TD55 490 aa16.14■□□□□ 0.17
IRF3-211ENST00000596644 PARD3BQ8TEW8 1205 aa16.14■□□□□ 0.17
IRF3-211ENST00000596644 DHTKD1Q96HY7 919 aaPredicted RBP16.14■□□□□ 0.17
IRF3-211ENST00000596644 OXCT2Q9BYC2 517 aaPredicted RBP16.14■□□□□ 0.17
IRF3-211ENST00000596644 NUP62CLQ9H1M0 184 aa16.14■□□□□ 0.17
IRF3-211ENST00000596644 KIAA1468Q9P260 1216 aa16.14■□□□□ 0.17
IRF3-211ENST00000596644 FBXW11Q9UKB1 542 aa16.14■□□□□ 0.17
IRF3-211ENST00000596644 UNC80Q8N2C7 3258 aa16.13■□□□□ 0.17
IRF3-211ENST00000596644 TRIM49BA6NDI0 452 aa16.13■□□□□ 0.17
IRF3-211ENST00000596644 TBC1D4O60343 1298 aa16.13■□□□□ 0.17
IRF3-211ENST00000596644 HUS1O60921 280 aa16.13■□□□□ 0.17
IRF3-211ENST00000596644 AKAP3O75969 853 aa16.13■□□□□ 0.17
IRF3-211ENST00000596644 CYP11A1P05108 521 aa16.13■□□□□ 0.17
IRF3-211ENST00000596644 EPB41P11171 864 aaKnown RBP16.13■□□□□ 0.17
IRF3-211ENST00000596644 CD44P16070 742 aaKnown RBP16.13■□□□□ 0.17
IRF3-211ENST00000596644 CCNE1P24864 410 aa16.13■□□□□ 0.17
IRF3-211ENST00000596644 VAMP7P51809 220 aa16.13■□□□□ 0.17
IRF3-211ENST00000596644 CBX2Q14781 532 aaPredicted RBP16.13■□□□□ 0.17
IRF3-211ENST00000596644 ANKRD40Q6AI12 368 aa16.13■□□□□ 0.17
IRF3-211ENST00000596644 INTS8Q75QN2 995 aaKnown RBP16.13■□□□□ 0.17
IRF3-211ENST00000596644 TMC2Q8TDI7 906 aa16.13■□□□□ 0.17
IRF3-211ENST00000596644 HPDLQ96IR7 371 aa16.13■□□□□ 0.17
IRF3-211ENST00000596644 RIPOR3Q96MK2 946 aa16.13■□□□□ 0.17
IRF3-211ENST00000596644 UHRF1Q96T88 793 aaPredicted RBP16.13■□□□□ 0.17
IRF3-211ENST00000596644 GZF1Q9H116 711 aaPredicted RBP16.13■□□□□ 0.17
IRF3-211ENST00000596644 SNX9Q9Y5X1 595 aa16.13■□□□□ 0.17
IRF3-211ENST00000596644 CCDC195A0A1B0GUA6 201 aa16.12■□□□□ 0.17
IRF3-211ENST00000596644 WDR27A2RRH5 827 aa16.12■□□□□ 0.17
IRF3-211ENST00000596644 OR6C75A6NL08 312 aa16.12■□□□□ 0.17
IRF3-211ENST00000596644 RFPL2O75678 378 aa16.12■□□□□ 0.17
IRF3-211ENST00000596644 C8AP07357 584 aa16.12■□□□□ 0.17
IRF3-211ENST00000596644 WEE2P0C1S8 567 aa16.12■□□□□ 0.17
IRF3-211ENST00000596644 BMP6P22004 513 aa16.12■□□□□ 0.17
IRF3-211ENST00000596644 ELF1P32519 619 aa16.12■□□□□ 0.17
IRF3-211ENST00000596644 MTHFRP42898 656 aa16.12■□□□□ 0.17
IRF3-211ENST00000596644 PMS1P54277 932 aaKnown RBP16.12■□□□□ 0.17
IRF3-211ENST00000596644 DLG4P78352 724 aa16.12■□□□□ 0.17
IRF3-211ENST00000596644 FKBP3Q00688 224 aaKnown RBP16.12■□□□□ 0.17
IRF3-211ENST00000596644 PPM1LQ5SGD2 360 aa16.12■□□□□ 0.17
IRF3-211ENST00000596644 ATAT1Q5SQI0 421 aa16.12■□□□□ 0.17
IRF3-211ENST00000596644 WSCD1Q658N2 575 aa16.12■□□□□ 0.17
IRF3-211ENST00000596644 SCARA3Q6AZY7 606 aa16.12■□□□□ 0.17
IRF3-211ENST00000596644 CCDC149Q6ZUS6 474 aa16.12■□□□□ 0.17
IRF3-211ENST00000596644 THEM5Q8N1Q8 247 aa16.12■□□□□ 0.17
IRF3-211ENST00000596644 CMASQ8NFW8 434 aaPredicted RBP16.12■□□□□ 0.17
IRF3-211ENST00000596644 ZNF461Q8TAF7 563 aa16.12■□□□□ 0.17
IRF3-211ENST00000596644 NELFBQ8WX92 580 aa16.12■□□□□ 0.17
IRF3-211ENST00000596644 SUSD6Q92537 303 aa16.12■□□□□ 0.17
IRF3-211ENST00000596644 ZNF516Q92618 1163 aa16.12■□□□□ 0.17
IRF3-211ENST00000596644 EEF2KMTQ96G04 330 aa16.12■□□□□ 0.17
IRF3-211ENST00000596644 BORCS6Q96GS4 357 aa16.12■□□□□ 0.17
IRF3-211ENST00000596644 NECTIN4Q96NY8 510 aa16.12■□□□□ 0.17
IRF3-211ENST00000596644 NECAB3Q96P71 396 aaPredicted RBP16.12■□□□□ 0.17
IRF3-211ENST00000596644 MKNK1Q9BUB5 465 aa16.12■□□□□ 0.17
IRF3-211ENST00000596644 ZDHHC7Q9NXF8 308 aa16.12■□□□□ 0.17
IRF3-211ENST00000596644 PRKAG3Q9UGI9 489 aa16.12■□□□□ 0.17
IRF3-211ENST00000596644 CDH22Q9UJ99 828 aa16.12■□□□□ 0.17
IRF3-211ENST00000596644 CTNND2Q9UQB3 1225 aa16.12■□□□□ 0.17
IRF3-211ENST00000596644 XIRP2A4UGR9 3374 aa16.11■□□□□ 0.17
IRF3-211ENST00000596644 BICDL2A1A5D9 508 aa16.11■□□□□ 0.17
IRF3-211ENST00000596644 PPP1R3GB7ZBB8 358 aa16.11■□□□□ 0.17
IRF3-211ENST00000596644 PRRG1O14668 218 aa16.11■□□□□ 0.17
IRF3-211ENST00000596644 ZMYND10O75800 440 aa16.11■□□□□ 0.17
IRF3-211ENST00000596644 CLDN10P78369 228 aa16.11■□□□□ 0.17
IRF3-211ENST00000596644 TDRD10Q5VZ19 366 aaKnown RBP16.11■□□□□ 0.17
IRF3-211ENST00000596644 TPGS2Q68CL5 300 aa16.11■□□□□ 0.17
IRF3-211ENST00000596644 C15orf39Q6ZRI6 1047 aa16.11■□□□□ 0.17
IRF3-211ENST00000596644 GPR149Q86SP6 731 aa16.11■□□□□ 0.17
IRF3-211ENST00000596644 SLC7A14Q8TBB6 771 aa16.11■□□□□ 0.17
IRF3-211ENST00000596644 COL25A1Q9BXS0 654 aaPredicted RBP16.11■□□□□ 0.17
IRF3-211ENST00000596644 PIDD1Q9HB75 910 aa16.11■□□□□ 0.17
IRF3-211ENST00000596644 GDAP2Q9NXN4 497 aa16.11■□□□□ 0.17
IRF3-211ENST00000596644 L1RE1Q9UN81 338 aa16.11■□□□□ 0.17
IRF3-211ENST00000596644 C2orf16Q68DN1 1984 aa16.11■□□□□ 0.17
IRF3-211ENST00000596644 SPTBN5Q9NRC6 3674 aaKnown RBP16.1■□□□□ 0.17
IRF3-211ENST00000596644 IKBKBO14920 756 aa16.1■□□□□ 0.17
IRF3-211ENST00000596644 SLC16A3O15427 465 aaKnown RBP16.1■□□□□ 0.17
IRF3-211ENST00000596644 ABLIM3O94929 683 aa16.1■□□□□ 0.17
IRF3-211ENST00000596644 CST3P01034 146 aaPredicted RBP16.1■□□□□ 0.17
IRF3-211ENST00000596644 OR4Q2P0C623 313 aa16.1■□□□□ 0.17
IRF3-211ENST00000596644 TRIM49P0CI25 452 aa16.1■□□□□ 0.17
IRF3-211ENST00000596644 TRIM49CP0CI26 452 aa16.1■□□□□ 0.17
IRF3-211ENST00000596644 ATF2P15336 505 aa16.1■□□□□ 0.17
IRF3-211ENST00000596644 SSTR3P32745 418 aaPredicted RBP16.1■□□□□ 0.17
IRF3-211ENST00000596644 MYL6P60660 151 aa16.1■□□□□ 0.17
IRF3-211ENST00000596644 TNNC1P63316 161 aa16.1■□□□□ 0.17
IRF3-211ENST00000596644 PAK1Q13153 545 aa16.1■□□□□ 0.17
IRF3-211ENST00000596644 ADHFE1Q8IWW8 467 aa16.1■□□□□ 0.17
IRF3-211ENST00000596644 TMEM86AQ8N2M4 240 aa16.1■□□□□ 0.17
IRF3-211ENST00000596644 PDCL2Q8N4E4 241 aa16.1■□□□□ 0.17
IRF3-211ENST00000596644 TOP6BLQ8N6T0 577 aa16.1■□□□□ 0.17
IRF3-211ENST00000596644 SMG7Q92540 1137 aaKnown RBP16.1■□□□□ 0.17
IRF3-211ENST00000596644 SYAP1Q96A49 352 aaPredicted RBP16.1■□□□□ 0.17
IRF3-211ENST00000596644 MMS19Q96T76 1030 aa16.1■□□□□ 0.17
IRF3-211ENST00000596644 PHF7Q9BWX1 381 aaPredicted RBP16.1■□□□□ 0.17
IRF3-211ENST00000596644 MMRN2Q9H8L6 949 aa16.1■□□□□ 0.17
IRF3-211ENST00000596644 CYP4F11Q9HBI6 524 aa16.1■□□□□ 0.17
IRF3-211ENST00000596644 AFF4Q9UHB7 1163 aaKnown RBP16.1■□□□□ 0.17
IRF3-211ENST00000596644 C4BPAP04003 597 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms