RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 TRIM49P0CI25 452 aa16.56■□□□□ 0.24
USE1-206ENST00000595101 TRIM49CP0CI26 452 aa16.56■□□□□ 0.24
USE1-206ENST00000595101 ODC1P11926 461 aa16.56■□□□□ 0.24
USE1-206ENST00000595101 CLDN10P78369 228 aa16.56■□□□□ 0.24
USE1-206ENST00000595101 CREMQ03060 361 aa16.56■□□□□ 0.24
USE1-206ENST00000595101 MYBPC2Q14324 1141 aa16.56■□□□□ 0.24
USE1-206ENST00000595101 OVOS1Q6IE37 1185 aa16.56■□□□□ 0.24
USE1-206ENST00000595101 PDXDC1Q6P996 788 aa16.56■□□□□ 0.24
USE1-206ENST00000595101 OR10T2Q8NGX3 314 aa16.56■□□□□ 0.24
USE1-206ENST00000595101 ZNF707Q96C28 371 aaPredicted RBP16.56■□□□□ 0.24
USE1-206ENST00000595101 UHRF1Q96T88 793 aaPredicted RBP16.56■□□□□ 0.24
USE1-206ENST00000595101 POMKQ9H5K3 350 aa16.56■□□□□ 0.24
USE1-206ENST00000595101 L1RE1Q9UN81 338 aa16.56■□□□□ 0.24
USE1-206ENST00000595101 SNX9Q9Y5X1 595 aa16.56■□□□□ 0.24
USE1-206ENST00000595101 H7C4K7 107 aa16.55■□□□□ 0.24
USE1-206ENST00000595101 SEC24AO95486 1093 aa16.55■□□□□ 0.24
USE1-206ENST00000595101 VNN1O95497 513 aa16.55■□□□□ 0.24
USE1-206ENST00000595101 VNN2O95498 520 aa16.55■□□□□ 0.24
USE1-206ENST00000595101 C4BPAP04003 597 aaKnown RBP16.55■□□□□ 0.24
USE1-206ENST00000595101 TYMPP19971 482 aa16.55■□□□□ 0.24
USE1-206ENST00000595101 STX17P56962 302 aa16.55■□□□□ 0.24
USE1-206ENST00000595101 MYL6P60660 151 aa16.55■□□□□ 0.24
USE1-206ENST00000595101 EDRF1Q3B7T1 1238 aa16.55■□□□□ 0.24
USE1-206ENST00000595101 SV2CQ496J9 727 aa16.55■□□□□ 0.24
USE1-206ENST00000595101 ZNF280DQ6N043 979 aa16.55■□□□□ 0.24
USE1-206ENST00000595101 RNF19BQ6ZMZ0 732 aa16.55■□□□□ 0.24
USE1-206ENST00000595101 USP37Q86T82 979 aa16.55■□□□□ 0.24
USE1-206ENST00000595101 LRRC52Q8N7C0 313 aa16.55■□□□□ 0.24
USE1-206ENST00000595101 HPDLQ96IR7 371 aa16.55■□□□□ 0.24
USE1-206ENST00000595101 PGLYRP2Q96PD5 576 aa16.55■□□□□ 0.24
USE1-206ENST00000595101 SFXN1Q9H9B4 322 aa16.55■□□□□ 0.24
USE1-206ENST00000595101 DZANK1Q9NVP4 752 aa16.55■□□□□ 0.24
USE1-206ENST00000595101 LRRN2O75325 713 aa16.54■□□□□ 0.24
USE1-206ENST00000595101 ABLIM3O94929 683 aa16.54■□□□□ 0.24
USE1-206ENST00000595101 CYP11A1P05108 521 aa16.54■□□□□ 0.24
USE1-206ENST00000595101 CBX2Q14781 532 aaPredicted RBP16.54■□□□□ 0.24
USE1-206ENST00000595101 CCDC142Q17RM4 750 aa16.54■□□□□ 0.24
USE1-206ENST00000595101 PUS10Q3MIT2 529 aaKnown RBP16.54■□□□□ 0.24
USE1-206ENST00000595101 FAM186BQ8IYM0 893 aa16.54■□□□□ 0.24
USE1-206ENST00000595101 PDCL2Q8N4E4 241 aa16.54■□□□□ 0.24
USE1-206ENST00000595101 ZNF461Q8TAF7 563 aa16.54■□□□□ 0.24
USE1-206ENST00000595101 SLC7A14Q8TBB6 771 aa16.54■□□□□ 0.24
USE1-206ENST00000595101 ZNF560Q96MR9 790 aa16.54■□□□□ 0.24
USE1-206ENST00000595101 DUSP9Q99956 384 aaKnown RBP16.54■□□□□ 0.24
USE1-206ENST00000595101 CRISPLD1Q9H336 500 aa16.54■□□□□ 0.24
USE1-206ENST00000595101 PLEKHA4Q9H4M7 779 aa16.54■□□□□ 0.24
USE1-206ENST00000595101 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.54■□□□□ 0.245e-8■■■■■ 188.3
USE1-206ENST00000595101 C8AP07357 584 aa16.54■□□□□ 0.24
USE1-206ENST00000595101 CCNE1P24864 410 aa16.54■□□□□ 0.24
USE1-206ENST00000595101 PSMC2P35998 433 aaKnown RBP16.54■□□□□ 0.24
USE1-206ENST00000595101 PNPLA4P41247 253 aa16.54■□□□□ 0.24
USE1-206ENST00000595101 VAMP7P51809 220 aa16.54■□□□□ 0.24
USE1-206ENST00000595101 ITIH3Q06033 890 aa16.54■□□□□ 0.24
USE1-206ENST00000595101 PPP3CAQ08209 521 aa16.54■□□□□ 0.24
USE1-206ENST00000595101 SOWAHAQ2M3V2 549 aa16.54■□□□□ 0.24
USE1-206ENST00000595101 GPR149Q86SP6 731 aa16.54■□□□□ 0.24
USE1-206ENST00000595101 LRRTM3Q86VH5 581 aa16.54■□□□□ 0.24
USE1-206ENST00000595101 OSTM1Q86WC4 334 aa16.54■□□□□ 0.24
USE1-206ENST00000595101 NELFBQ8WX92 580 aa16.54■□□□□ 0.24
USE1-206ENST00000595101 MED15Q96RN5 788 aa16.54■□□□□ 0.24
USE1-206ENST00000595101 XYLT2Q9H1B5 865 aa16.54■□□□□ 0.24
USE1-206ENST00000595101 CTNND2Q9UQB3 1225 aa16.54■□□□□ 0.24
USE1-206ENST00000595101 ZMYND10O75800 440 aa16.53■□□□□ 0.24
USE1-206ENST00000595101 CPB1P15086 417 aa16.53■□□□□ 0.24
USE1-206ENST00000595101 RPL13P26373 211 aaKnown RBP16.53■□□□□ 0.24
USE1-206ENST00000595101 GCLMP48507 274 aa16.53■□□□□ 0.24
USE1-206ENST00000595101 ZP2Q05996 745 aa16.53■□□□□ 0.24
USE1-206ENST00000595101 ADCY1Q08828 1119 aa16.53■□□□□ 0.24
USE1-206ENST00000595101 BIRC3Q13489 604 aa16.53■□□□□ 0.24
USE1-206ENST00000595101 CES5AQ6NT32 575 aa16.53■□□□□ 0.24
USE1-206ENST00000595101 TTI2Q6NXR4 508 aa16.53■□□□□ 0.24
USE1-206ENST00000595101 SV2AQ7L0J3 742 aa16.53■□□□□ 0.24
USE1-206ENST00000595101 ZC3H3Q8IXZ2 948 aaKnown RBP16.53■□□□□ 0.24
USE1-206ENST00000595101 TMC2Q8TDI7 906 aa16.53■□□□□ 0.24
USE1-206ENST00000595101 KHSRPQ92945 711 aaKnown RBP eCLIP16.53■□□□□ 0.24
USE1-206ENST00000595101 DHTKD1Q96HY7 919 aaPredicted RBP16.53■□□□□ 0.24
USE1-206ENST00000595101 RPGRIP1Q96KN7 1286 aa16.53■□□□□ 0.24
USE1-206ENST00000595101 MMRN2Q9H8L6 949 aa16.53■□□□□ 0.24
USE1-206ENST00000595101 GDAP2Q9NXN4 497 aa16.53■□□□□ 0.24
USE1-206ENST00000595101 PSMA7O14818 248 aa16.52■□□□□ 0.24
USE1-206ENST00000595101 CETN3O15182 167 aa16.52■□□□□ 0.24
USE1-206ENST00000595101 CCL16O15467 120 aa16.52■□□□□ 0.24
USE1-206ENST00000595101 ATF2P15336 505 aa16.52■□□□□ 0.24
USE1-206ENST00000595101 TTC9BQ8N6N2 239 aa16.52■□□□□ 0.24
USE1-206ENST00000595101 ATAD1Q8NBU5 361 aa16.52■□□□□ 0.24
USE1-206ENST00000595101 NUP62CLQ9H1M0 184 aa16.52■□□□□ 0.24
USE1-206ENST00000595101 POLIQ9UNA4 740 aa16.52■□□□□ 0.24
USE1-206ENST00000595101 NME7Q9Y5B8 376 aa16.52■□□□□ 0.24
USE1-206ENST00000595101 TRIOO75962 3097 aa16.52■□□□□ 0.23
USE1-206ENST00000595101 MAPK13O15264 365 aa16.51■□□□□ 0.23
USE1-206ENST00000595101 PHACTR2O75167 634 aa16.51■□□□□ 0.23
USE1-206ENST00000595101 ACAT1P24752 427 aaKnown RBP16.51■□□□□ 0.23
USE1-206ENST00000595101 LMO2P25791 158 aa16.51■□□□□ 0.23
USE1-206ENST00000595101 NTHL1P78549 312 aa16.51■□□□□ 0.23
USE1-206ENST00000595101 FKBP3Q00688 224 aaKnown RBP16.51■□□□□ 0.23
USE1-206ENST00000595101 MYO1EQ12965 1108 aa16.51■□□□□ 0.23
USE1-206ENST00000595101 WDR72Q3MJ13 1102 aa16.51■□□□□ 0.23
USE1-206ENST00000595101 ZACNQ401N2 412 aa16.51■□□□□ 0.23
USE1-206ENST00000595101 ATAT1Q5SQI0 421 aa16.51■□□□□ 0.23
USE1-206ENST00000595101 C15orf39Q6ZRI6 1047 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms