RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 CCDC189A1A4V9 331 aa14□□□□□ -0.17
VRK3-209ENST00000594948 C2CD2LO14523 706 aa14□□□□□ -0.17
VRK3-209ENST00000594948 EXTL3O43909 919 aa14□□□□□ -0.17
VRK3-209ENST00000594948 ACO1P21399 889 aaKnown RBP14□□□□□ -0.17
VRK3-209ENST00000594948 IRX1P78414 480 aaPredicted RBP14□□□□□ -0.17
VRK3-209ENST00000594948 DNAJC3Q13217 504 aa14□□□□□ -0.17
VRK3-209ENST00000594948 TAF11Q15544 211 aa14□□□□□ -0.17
VRK3-209ENST00000594948 EFHC2Q5JST6 749 aa14□□□□□ -0.17
VRK3-209ENST00000594948 CDCA2Q69YH5 1023 aaPredicted RBP14□□□□□ -0.17
VRK3-209ENST00000594948 STYK1Q6J9G0 422 aa14□□□□□ -0.17
VRK3-209ENST00000594948 CYP4F22Q6NT55 531 aa14□□□□□ -0.17
VRK3-209ENST00000594948 CENPUQ71F23 418 aa14□□□□□ -0.17
VRK3-209ENST00000594948 PCGF5Q86SE9 256 aa14□□□□□ -0.17
VRK3-209ENST00000594948 SLC7A6OSQ96CW6 309 aaPredicted RBP14□□□□□ -0.17
VRK3-209ENST00000594948 NAF1Q96HR8 494 aaKnown RBP14□□□□□ -0.17
VRK3-209ENST00000594948 TUBB6Q9BUF5 446 aa14□□□□□ -0.17
VRK3-209ENST00000594948 PARVAQ9NVD7 372 aa14□□□□□ -0.17
VRK3-209ENST00000594948 PSMC3IPQ9P2W1 217 aaPredicted RBP14□□□□□ -0.17
VRK3-209ENST00000594948 A6NHS1 94 aa13.99□□□□□ -0.17
VRK3-209ENST00000594948 SPAG7O75391 227 aa13.99□□□□□ -0.17
VRK3-209ENST00000594948 NEBLO76041 1014 aa13.99□□□□□ -0.17
VRK3-209ENST00000594948 C4BPAP04003 597 aaKnown RBP13.99□□□□□ -0.17
VRK3-209ENST00000594948 GRIK3Q13003 919 aa13.99□□□□□ -0.17
VRK3-209ENST00000594948 PKN2Q16513 984 aaKnown RBP13.99□□□□□ -0.17
VRK3-209ENST00000594948 XRRA1Q6P2D8 792 aa13.99□□□□□ -0.17
VRK3-209ENST00000594948 MCPH1Q8NEM0 835 aa13.99□□□□□ -0.17
VRK3-209ENST00000594948 SYTL5Q8TDW5 730 aaPredicted RBP13.99□□□□□ -0.17
VRK3-209ENST00000594948 ZNF516Q92618 1163 aa13.99□□□□□ -0.17
VRK3-209ENST00000594948 NKD2Q969F2 451 aaPredicted RBP13.99□□□□□ -0.17
VRK3-209ENST00000594948 AGBL1Q96MI9 1066 aa13.99□□□□□ -0.17
VRK3-209ENST00000594948 SLITRK1Q96PX8 696 aa13.99□□□□□ -0.17
VRK3-209ENST00000594948 C11orf70Q9BRQ4 267 aa13.99□□□□□ -0.17
VRK3-209ENST00000594948 FRMD8P1Q9BZ68 369 aaPredicted RBP13.99□□□□□ -0.17
VRK3-209ENST00000594948 PCDH9Q9HC56 1237 aa13.99□□□□□ -0.17
VRK3-209ENST00000594948 PARP14Q460N5 1801 aa13.99□□□□□ -0.17
VRK3-209ENST00000594948 KIF3CO14782 793 aa13.99□□□□□ -0.17
VRK3-209ENST00000594948 TLR3O15455 904 aaKnown RBP13.99□□□□□ -0.17
VRK3-209ENST00000594948 HLA-DRAP01903 254 aa13.99□□□□□ -0.17
VRK3-209ENST00000594948 ITGAVP06756 1048 aa13.99□□□□□ -0.17
VRK3-209ENST00000594948 T-ENOLP0DO92 83 aa13.99□□□□□ -0.17
VRK3-209ENST00000594948 PECAM1P16284 738 aaPredicted RBP13.99□□□□□ -0.17
VRK3-209ENST00000594948 TSHRP16473 764 aa13.99□□□□□ -0.17
VRK3-209ENST00000594948 KRT15P19012 456 aa13.99□□□□□ -0.17
VRK3-209ENST00000594948 TBXAS1P24557 533 aaPredicted RBP13.99□□□□□ -0.17
VRK3-209ENST00000594948 PTPN4P29074 926 aa13.99□□□□□ -0.17
VRK3-209ENST00000594948 GCKP35557 465 aa13.99□□□□□ -0.17
VRK3-209ENST00000594948 VCPP55072 806 aaKnown RBP13.99□□□□□ -0.17
VRK3-209ENST00000594948 RNASEH2BQ5TBB1 312 aaKnown RBP13.99□□□□□ -0.17
VRK3-209ENST00000594948 HHATQ5VTY9 493 aa13.99□□□□□ -0.17
VRK3-209ENST00000594948 PLA2G4FQ68DD2 849 aa13.99□□□□□ -0.17
VRK3-209ENST00000594948 CAPRIN2Q6IMN6 1127 aaKnown RBP13.99□□□□□ -0.17
VRK3-209ENST00000594948 FAM13CQ8NE31 585 aa13.99□□□□□ -0.17
VRK3-209ENST00000594948 BSNDQ8WZ55 320 aa13.99□□□□□ -0.17
VRK3-209ENST00000594948 PAIP2Q9BPZ3 127 aaKnown RBP13.99□□□□□ -0.17
VRK3-209ENST00000594948 PI4K2AQ9BTU6 479 aa13.99□□□□□ -0.17
VRK3-209ENST00000594948 KIAA1683Q9H0B3 1180 aa13.99□□□□□ -0.17
VRK3-209ENST00000594948 FBXO28Q9NVF7 368 aa13.99□□□□□ -0.17
VRK3-209ENST00000594948 STYXL1Q9Y6J8 313 aa13.99□□□□□ -0.17
VRK3-209ENST00000594948 TMEM150BA6NC51 233 aa13.98□□□□□ -0.17
VRK3-209ENST00000594948 POC1B-GALNT4F8VUJ3 575 aa13.98□□□□□ -0.17
VRK3-209ENST00000594948 NFIBO00712 420 aa13.98□□□□□ -0.17
VRK3-209ENST00000594948 PPP1R12AO14974 1030 aaPredicted RBP13.98□□□□□ -0.17
VRK3-209ENST00000594948 CCNE2O96020 404 aa13.98□□□□□ -0.17
VRK3-209ENST00000594948 TPBGLP0DKB5 382 aa13.98□□□□□ -0.17
VRK3-209ENST00000594948 CD58P19256 250 aa13.98□□□□□ -0.17
VRK3-209ENST00000594948 CA4P22748 312 aa13.98□□□□□ -0.17
VRK3-209ENST00000594948 TARSP26639 723 aaKnown RBP13.98□□□□□ -0.17
VRK3-209ENST00000594948 DSG3P32926 999 aa13.98□□□□□ -0.17
VRK3-209ENST00000594948 PHBP35232 272 aa13.98□□□□□ -0.17
VRK3-209ENST00000594948 ARSEP51690 589 aa13.98□□□□□ -0.17
VRK3-209ENST00000594948 TAP1Q03518 808 aa13.98□□□□□ -0.17
VRK3-209ENST00000594948 CUL2Q13617 745 aa13.98□□□□□ -0.17
VRK3-209ENST00000594948 PGM5Q15124 567 aa13.98□□□□□ -0.17
VRK3-209ENST00000594948 OASLQ15646 514 aaKnown RBP13.98□□□□□ -0.17
VRK3-209ENST00000594948 FKBP1CQ5VVH2 108 aa13.98□□□□□ -0.17
VRK3-209ENST00000594948 FYB2Q5VWT5 728 aa13.98□□□□□ -0.17
VRK3-209ENST00000594948 ANO5Q75V66 913 aa13.98□□□□□ -0.17
VRK3-209ENST00000594948 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.98□□□□□ -0.17
VRK3-209ENST00000594948 ALKBH8Q96BT7 664 aaKnown RBP13.98□□□□□ -0.17
VRK3-209ENST00000594948 FAM213AQ9BRX8 229 aa13.98□□□□□ -0.17
VRK3-209ENST00000594948 TBC1D10AQ9BXI6 508 aa13.98□□□□□ -0.17
VRK3-209ENST00000594948 PDLIM7Q9NR12 457 aa13.98□□□□□ -0.17
VRK3-209ENST00000594948 DDX56Q9NY93 547 aaKnown RBP13.98□□□□□ -0.17
VRK3-209ENST00000594948 ARHGAP28Q9P2N2 729 aa13.98□□□□□ -0.17
VRK3-209ENST00000594948 HAO1Q9UJM8 370 aa13.98□□□□□ -0.17
VRK3-209ENST00000594948 DNPEPQ9ULA0 475 aa13.98□□□□□ -0.17
VRK3-209ENST00000594948 ZNF148Q9UQR1 794 aa13.98□□□□□ -0.17
VRK3-209ENST00000594948 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.98□□□□□ -0.17
VRK3-209ENST00000594948 CNTNAP1P78357 1384 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 TMEM191CA6NGB0 347 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 SPDYE2BA6NHP3 402 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 SMAPO00193 183 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 CLGNO14967 610 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 HNRNPDLO14979 420 aaKnown RBP13.97□□□□□ -0.17
VRK3-209ENST00000594948 WDR46O15213 610 aaKnown RBP13.97□□□□□ -0.17
VRK3-209ENST00000594948 TM9SF1O15321 606 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 TMEM191BP0C7N4 346 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 SPDYE6P0CI01 402 aa13.97□□□□□ -0.17
VRK3-209ENST00000594948 TROVE2P10155 538 aaKnown RBP eCLIP13.97□□□□□ -0.17
VRK3-209ENST00000594948 GNA15P30679 374 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms