RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 OXCT2Q9BYC2 517 aaPredicted RBP17.77■□□□□ 0.44
LIG1-205ENST00000593425 FAM126AQ9BYI3 521 aaPredicted RBP17.77■□□□□ 0.44
LIG1-205ENST00000593425 GPR88Q9GZN0 384 aa17.77■□□□□ 0.44
LIG1-205ENST00000593425 ODF2LQ9ULJ1 636 aa17.77■□□□□ 0.44
LIG1-205ENST00000593425 TBX20Q9UMR3 447 aa17.77■□□□□ 0.44
LIG1-205ENST00000593425 SLC27A5Q9Y2P5 690 aa17.77■□□□□ 0.44
LIG1-205ENST00000593425 KIF3AQ9Y496 699 aa17.77■□□□□ 0.44
LIG1-205ENST00000593425 GPR179Q6PRD1 2367 aa17.77■□□□□ 0.44
LIG1-205ENST00000593425 KIF26AQ9ULI4 1882 aaPredicted RBP17.76■□□□□ 0.43
LIG1-205ENST00000593425 OGTO15294 1046 aa17.76■□□□□ 0.43
LIG1-205ENST00000593425 SOAT2O75908 522 aa17.76■□□□□ 0.43
LIG1-205ENST00000593425 PIGRP01833 764 aa17.76■□□□□ 0.43
LIG1-205ENST00000593425 ADRB2P07550 413 aa17.76■□□□□ 0.43
LIG1-205ENST00000593425 TYMPP19971 482 aa17.76■□□□□ 0.43
LIG1-205ENST00000593425 TGM1P22735 817 aa17.76■□□□□ 0.43
LIG1-205ENST00000593425 SOX9P48436 509 aa17.76■□□□□ 0.43
LIG1-205ENST00000593425 DHX8Q14562 1220 aaKnown RBP17.76■□□□□ 0.43
LIG1-205ENST00000593425 WDR44Q5JSH3 913 aa17.76■□□□□ 0.43
LIG1-205ENST00000593425 SPATA1Q5VX52 437 aa17.76■□□□□ 0.43
LIG1-205ENST00000593425 ARL6IP4Q66PJ3 421 aaKnown RBP17.76■□□□□ 0.43
LIG1-205ENST00000593425 OVOS1Q6IE37 1185 aa17.76■□□□□ 0.43
LIG1-205ENST00000593425 JADE1Q6IE81 842 aa17.76■□□□□ 0.43
LIG1-205ENST00000593425 MAMSTRQ6ZN01 415 aa17.76■□□□□ 0.43
LIG1-205ENST00000593425 ATAD1Q8NBU5 361 aa17.76■□□□□ 0.43
LIG1-205ENST00000593425 IER2Q9BTL4 223 aa17.76■□□□□ 0.43
LIG1-205ENST00000593425 RPF1Q9H9Y2 349 aaKnown RBP17.76■□□□□ 0.43
LIG1-205ENST00000593425 PARD6AQ9NPB6 346 aa17.76■□□□□ 0.43
LIG1-205ENST00000593425 BLOC1S4Q9NUP1 217 aa17.76■□□□□ 0.43
LIG1-205ENST00000593425 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.76■□□□□ 0.43
LIG1-205ENST00000593425 TCHHQ07283 1943 aa17.75■□□□□ 0.43
LIG1-205ENST00000593425 SLC38A8A6NNN8 435 aa17.75■□□□□ 0.43
LIG1-205ENST00000593425 XPOTO43592 962 aaKnown RBP17.75■□□□□ 0.43
LIG1-205ENST00000593425 FAM13AO94988 1023 aa17.75■□□□□ 0.43
LIG1-205ENST00000593425 NFICP08651 508 aa17.75■□□□□ 0.43
LIG1-205ENST00000593425 GJB2P29033 226 aa17.75■□□□□ 0.43
LIG1-205ENST00000593425 CCR3P51677 355 aa17.75■□□□□ 0.43
LIG1-205ENST00000593425 ZNF131P52739 623 aa17.75■□□□□ 0.43
LIG1-205ENST00000593425 EPHB3P54753 998 aa17.75■□□□□ 0.43
LIG1-205ENST00000593425 LILRA4P59901 499 aa17.75■□□□□ 0.43
LIG1-205ENST00000593425 SATB1Q01826 763 aa17.75■□□□□ 0.43
LIG1-205ENST00000593425 FCHO2Q0JRZ9 810 aa17.75■□□□□ 0.43
LIG1-205ENST00000593425 MYBPC2Q14324 1141 aa17.75■□□□□ 0.43
LIG1-205ENST00000593425 LPAL2Q16609 132 aa17.75■□□□□ 0.43
LIG1-205ENST00000593425 GAREM2Q75VX8 874 aa17.75■□□□□ 0.43
LIG1-205ENST00000593425 YAF2Q8IY57 180 aa17.75■□□□□ 0.43
LIG1-205ENST00000593425 MYCT1Q8N699 235 aa17.75■□□□□ 0.43
LIG1-205ENST00000593425 GPR161Q8N6U8 529 aaKnown RBP17.75■□□□□ 0.43
LIG1-205ENST00000593425 OR10T2Q8NGX3 314 aa17.75■□□□□ 0.43
LIG1-205ENST00000593425 CSGALNACT1Q8TDX6 532 aa17.75■□□□□ 0.43
LIG1-205ENST00000593425 SECISBP2LQ93073 1101 aaKnown RBP17.75■□□□□ 0.43
LIG1-205ENST00000593425 E2F7Q96AV8 911 aa17.75■□□□□ 0.43
LIG1-205ENST00000593425 FAM212AQ96EL1 285 aa17.75■□□□□ 0.43
LIG1-205ENST00000593425 LRRC3BQ96PB8 259 aa17.75■□□□□ 0.43
LIG1-205ENST00000593425 FIZ1Q96SL8 496 aa17.75■□□□□ 0.43
LIG1-205ENST00000593425 RBM12Q9NTZ6 932 aaKnown RBP17.75■□□□□ 0.43
LIG1-205ENST00000593425 CPSF3Q9UKF6 684 aaKnown RBP17.75■□□□□ 0.43
LIG1-205ENST00000593425 SCN1AP35498 2009 aa17.74■□□□□ 0.43
LIG1-205ENST00000593425 A0A0B4J269 797 aa17.74■□□□□ 0.43
LIG1-205ENST00000593425 CHADO15335 359 aa17.74■□□□□ 0.43
LIG1-205ENST00000593425 CD2BP2O95400 341 aaKnown RBP17.74■□□□□ 0.43
LIG1-205ENST00000593425 ODC1P11926 461 aa17.74■□□□□ 0.43
LIG1-205ENST00000593425 ALDH1A3P47895 512 aa17.74■□□□□ 0.43
LIG1-205ENST00000593425 CDR1P51861 262 aa17.74■□□□□ 0.43
LIG1-205ENST00000593425 GRIN1Q05586 938 aa17.74■□□□□ 0.43
LIG1-205ENST00000593425 KYAT1Q16773 422 aa17.74■□□□□ 0.43
LIG1-205ENST00000593425 C9orf57Q5W0N0 161 aa17.74■□□□□ 0.43
LIG1-205ENST00000593425 DNAJB7Q7Z6W7 309 aaPredicted RBP17.74■□□□□ 0.43
LIG1-205ENST00000593425 ARID3BQ8IVW6 561 aaPredicted RBP17.74■□□□□ 0.43
LIG1-205ENST00000593425 PSMG2Q969U7 264 aa17.74■□□□□ 0.43
LIG1-205ENST00000593425 TMX3Q96JJ7 454 aa17.74■□□□□ 0.43
LIG1-205ENST00000593425 ZFYVE19Q96K21 471 aa17.74■□□□□ 0.43
LIG1-205ENST00000593425 SENP8Q96LD8 212 aa17.74■□□□□ 0.43
LIG1-205ENST00000593425 LPIN3Q9BQK8 851 aa17.74■□□□□ 0.43
LIG1-205ENST00000593425 MSTO1Q9BUK6 570 aa17.74■□□□□ 0.43
LIG1-205ENST00000593425 GMEB2Q9UKD1 530 aa17.74■□□□□ 0.43
LIG1-205ENST00000593425 USP18Q9UMW8 372 aa17.74■□□□□ 0.43
LIG1-205ENST00000593425 TISP43B9A030 160 aa17.73■□□□□ 0.43
LIG1-205ENST00000593425 H3BQV1 296 aa17.73■□□□□ 0.43
LIG1-205ENST00000593425 PIRO00625 290 aa17.73■□□□□ 0.43
LIG1-205ENST00000593425 TRAK2O60296 914 aa17.73■□□□□ 0.43
LIG1-205ENST00000593425 GABRR2P28476 465 aa17.73■□□□□ 0.43
LIG1-205ENST00000593425 ATXN1P54253 815 aaKnown RBP17.73■□□□□ 0.43
LIG1-205ENST00000593425 NRLP54845 237 aa17.73■□□□□ 0.43
LIG1-205ENST00000593425 MLLT6P55198 1093 aaPredicted RBP17.73■□□□□ 0.43
LIG1-205ENST00000593425 DMWDQ09019 674 aa17.73■□□□□ 0.43
LIG1-205ENST00000593425 MCM6Q14566 821 aa17.73■□□□□ 0.43
LIG1-205ENST00000593425 PPP2R5DQ14738 602 aa17.73■□□□□ 0.43
LIG1-205ENST00000593425 RABEP1Q15276 862 aa17.73■□□□□ 0.43
LIG1-205ENST00000593425 TXNDC11Q6PKC3 985 aa17.73■□□□□ 0.43
LIG1-205ENST00000593425 Q6ZS52 159 aa17.73■□□□□ 0.43
LIG1-205ENST00000593425 TTC8Q8TAM2 541 aa17.73■□□□□ 0.43
LIG1-205ENST00000593425 CALML4Q96GE6 196 aa17.73■□□□□ 0.43
LIG1-205ENST00000593425 MSANTD3Q96H12 275 aa17.73■□□□□ 0.43
LIG1-205ENST00000593425 AK8Q96MA6 479 aa17.73■□□□□ 0.43
LIG1-205ENST00000593425 TSPAN18Q96SJ8 248 aa17.73■□□□□ 0.43
LIG1-205ENST00000593425 ATXN3LQ9H3M9 355 aa17.73■□□□□ 0.43
LIG1-205ENST00000593425 PARVGQ9HBI0 331 aa17.73■□□□□ 0.43
LIG1-205ENST00000593425 ASB3Q9Y575 518 aa17.73■□□□□ 0.43
LIG1-205ENST00000593425 F5P12259 2224 aa17.73■□□□□ 0.43
LIG1-205ENST00000593425 CEP250Q9BV73 2442 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms