RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 MCCD1P59942 119 aaPredicted RBP12.82□□□□□ -0.36
DDX39A-219ENST00000592927 TBX2Q13207 712 aaPredicted RBP12.82□□□□□ -0.36
DDX39A-219ENST00000592927 SURF1Q15526 300 aa12.82□□□□□ -0.36
DDX39A-219ENST00000592927 INTS8Q75QN2 995 aaKnown RBP12.82□□□□□ -0.36
DDX39A-219ENST00000592927 CCDC186Q7Z3E2 898 aa12.82□□□□□ -0.36
DDX39A-219ENST00000592927 ZNF280BQ86YH2 543 aa12.82□□□□□ -0.36
DDX39A-219ENST00000592927 CCDC150Q8NCX0 1101 aa12.82□□□□□ -0.36
DDX39A-219ENST00000592927 CLP1Q92989 425 aaKnown RBP12.82□□□□□ -0.36
DDX39A-219ENST00000592927 BORCS6Q96GS4 357 aa12.82□□□□□ -0.36
DDX39A-219ENST00000592927 ZMAT2Q96NC0 199 aaKnown RBP12.82□□□□□ -0.36
DDX39A-219ENST00000592927 PPP1R10Q96QC0 940 aaKnown RBP12.82□□□□□ -0.36
DDX39A-219ENST00000592927 NUP58Q9BVL2 599 aa12.82□□□□□ -0.36
DDX39A-219ENST00000592927 MFSD1Q9H3U5 465 aa12.82□□□□□ -0.36
DDX39A-219ENST00000592927 CWH43Q9H720 699 aa12.82□□□□□ -0.36
DDX39A-219ENST00000592927 NRDE2Q9H7Z3 1164 aa12.82□□□□□ -0.36
DDX39A-219ENST00000592927 HCSTQ9UBK5 93 aa12.82□□□□□ -0.36
DDX39A-219ENST00000592927 DERAQ9Y315 318 aa12.82□□□□□ -0.36
DDX39A-219ENST00000592927 CFAP47Q6ZTR5 3102 aa12.82□□□□□ -0.36
DDX39A-219ENST00000592927 ZNF292O60281 2723 aa12.82□□□□□ -0.36
DDX39A-219ENST00000592927 WDR87Q6ZQQ6 2873 aa12.81□□□□□ -0.36
DDX39A-219ENST00000592927 CARNS1A5YM72 827 aa12.81□□□□□ -0.36
DDX39A-219ENST00000592927 XPOTO43592 962 aaKnown RBP12.81□□□□□ -0.36
DDX39A-219ENST00000592927 ZC3H11AO75152 810 aaKnown RBP eCLIP12.81□□□□□ -0.36
DDX39A-219ENST00000592927 DDHD2O94830 711 aa12.81□□□□□ -0.36
DDX39A-219ENST00000592927 ALDH2P05091 517 aa12.81□□□□□ -0.36
DDX39A-219ENST00000592927 KRT13P13646 458 aa12.81□□□□□ -0.36
DDX39A-219ENST00000592927 LAG3P18627 525 aa12.81□□□□□ -0.36
DDX39A-219ENST00000592927 ALDH7A1P49419 539 aaKnown RBP12.81□□□□□ -0.36
DDX39A-219ENST00000592927 CASP4P49662 377 aa12.81□□□□□ -0.36
DDX39A-219ENST00000592927 CLCN5P51795 746 aa12.81□□□□□ -0.36
DDX39A-219ENST00000592927 RBM10P98175 930 aaKnown RBP12.81□□□□□ -0.36
DDX39A-219ENST00000592927 CYP24A1Q07973 514 aa12.81□□□□□ -0.36
DDX39A-219ENST00000592927 TUSC3Q13454 348 aa12.81□□□□□ -0.36
DDX39A-219ENST00000592927 MTMR3Q13615 1198 aa12.81□□□□□ -0.36
DDX39A-219ENST00000592927 TMEM132DQ14C87 1099 aa12.81□□□□□ -0.36
DDX39A-219ENST00000592927 PSMD6Q15008 389 aa12.81□□□□□ -0.36
DDX39A-219ENST00000592927 ANGPT1Q15389 498 aa12.81□□□□□ -0.36
DDX39A-219ENST00000592927 JADE1Q6IE81 842 aa12.81□□□□□ -0.36
DDX39A-219ENST00000592927 USP37Q86T82 979 aa12.81□□□□□ -0.36
DDX39A-219ENST00000592927 SPPL3Q8TCT6 385 aa12.81□□□□□ -0.36
DDX39A-219ENST00000592927 CCDC127Q96BQ5 260 aa12.81□□□□□ -0.36
DDX39A-219ENST00000592927 ZNF558Q96NG5 402 aa12.81□□□□□ -0.36
DDX39A-219ENST00000592927 FNBP1Q96RU3 617 aa12.81□□□□□ -0.36
DDX39A-219ENST00000592927 PLVAPQ9BX97 442 aa12.81□□□□□ -0.36
DDX39A-219ENST00000592927 SMOC2Q9H3U7 446 aa12.81□□□□□ -0.36
DDX39A-219ENST00000592927 PDE11AQ9HCR9 933 aa12.81□□□□□ -0.36
DDX39A-219ENST00000592927 SORCS3Q9UPU3 1222 aa12.81□□□□□ -0.36
DDX39A-219ENST00000592927 C2CD2Q9Y426 696 aa12.81□□□□□ -0.36
DDX39A-219ENST00000592927 PCDHB12Q9Y5F1 795 aa12.81□□□□□ -0.36
DDX39A-219ENST00000592927 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.81□□□□□ -0.36
DDX39A-219ENST00000592927 CASTOR2A6NHX0 329 aa12.8□□□□□ -0.36
DDX39A-219ENST00000592927 NRDCO43847 1150 aa12.8□□□□□ -0.36
DDX39A-219ENST00000592927 AFPP02771 609 aaKnown RBP12.8□□□□□ -0.36
DDX39A-219ENST00000592927 NFICP08651 508 aa12.8□□□□□ -0.36
DDX39A-219ENST00000592927 DLATP10515 647 aaKnown RBP12.8□□□□□ -0.36
DDX39A-219ENST00000592927 OR1G1P47890 313 aa12.8□□□□□ -0.36
DDX39A-219ENST00000592927 BCAR1P56945 870 aa12.8□□□□□ -0.36
DDX39A-219ENST00000592927 TFAMQ00059 246 aaKnown RBP12.8□□□□□ -0.36
DDX39A-219ENST00000592927 DSC1Q08554 894 aa12.8□□□□□ -0.36
DDX39A-219ENST00000592927 KCNH2Q12809 1159 aa12.8□□□□□ -0.36
DDX39A-219ENST00000592927 BFSP1Q12934 665 aa12.8□□□□□ -0.36
DDX39A-219ENST00000592927 RSPO4Q2I0M5 234 aaPredicted RBP12.8□□□□□ -0.36
DDX39A-219ENST00000592927 FIGNQ5HY92 759 aa12.8□□□□□ -0.36
DDX39A-219ENST00000592927 KCNT2Q6UVM3 1135 aa12.8□□□□□ -0.36
DDX39A-219ENST00000592927 PPFIBP1Q86W92 1011 aa12.8□□□□□ -0.36
DDX39A-219ENST00000592927 NT5DC4Q86YG4 428 aa12.8□□□□□ -0.36
DDX39A-219ENST00000592927 COLGALT2Q8IYK4 626 aa12.8□□□□□ -0.36
DDX39A-219ENST00000592927 COLGALT1Q8NBJ5 622 aa12.8□□□□□ -0.36
DDX39A-219ENST00000592927 BEST2Q8NFU1 509 aa12.8□□□□□ -0.36
DDX39A-219ENST00000592927 CACTINQ8WUQ7 758 aaKnown RBP12.8□□□□□ -0.36
DDX39A-219ENST00000592927 C18orf25Q96B23 403 aaPredicted RBP12.8□□□□□ -0.36
DDX39A-219ENST00000592927 HINFPQ9BQA5 517 aa12.8□□□□□ -0.36
DDX39A-219ENST00000592927 TMEM175Q9BSA9 504 aa12.8□□□□□ -0.36
DDX39A-219ENST00000592927 SEMA4AQ9H3S1 761 aa12.8□□□□□ -0.36
DDX39A-219ENST00000592927 TLE6Q9H808 572 aa12.8□□□□□ -0.36
DDX39A-219ENST00000592927 DNAJB4Q9UDY4 337 aa12.8□□□□□ -0.36
DDX39A-219ENST00000592927 UBQLN1Q9UMX0 589 aaKnown RBP12.8□□□□□ -0.36
DDX39A-219ENST00000592927 FAN1Q9Y2M0 1017 aa12.8□□□□□ -0.36
DDX39A-219ENST00000592927 GTPBP10A4D1E9 387 aaKnown RBP12.79□□□□□ -0.36
DDX39A-219ENST00000592927 PER2O15055 1255 aa12.79□□□□□ -0.36
DDX39A-219ENST00000592927 PI15O43692 258 aa12.79□□□□□ -0.36
DDX39A-219ENST00000592927 STX10O60499 249 aa12.79□□□□□ -0.36
DDX39A-219ENST00000592927 B4GALT3O60512 393 aa12.79□□□□□ -0.36
DDX39A-219ENST00000592927 ITGB1P05556 798 aa12.79□□□□□ -0.36
DDX39A-219ENST00000592927 GALTP07902 379 aa12.79□□□□□ -0.36
DDX39A-219ENST00000592927 TNNI1P19237 187 aa12.79□□□□□ -0.36
DDX39A-219ENST00000592927 CYP3A5P20815 502 aa12.79□□□□□ -0.36
DDX39A-219ENST00000592927 SLC11A1P49279 550 aa12.79□□□□□ -0.36
DDX39A-219ENST00000592927 WNT7BP56706 349 aa12.79□□□□□ -0.36
DDX39A-219ENST00000592927 NAB2Q15742 525 aa12.79□□□□□ -0.36
DDX39A-219ENST00000592927 ZBTB6Q15916 424 aa12.79□□□□□ -0.36
DDX39A-219ENST00000592927 WDR49Q8IV35 697 aa12.79□□□□□ -0.36
DDX39A-219ENST00000592927 CNGA4Q8IV77 575 aa12.79□□□□□ -0.36
DDX39A-219ENST00000592927 LRRC8AQ8IWT6 810 aa12.79□□□□□ -0.36
DDX39A-219ENST00000592927 CCDC112Q8NEF3 446 aa12.79□□□□□ -0.36
DDX39A-219ENST00000592927 FLCNQ8NFG4 579 aa12.79□□□□□ -0.36
DDX39A-219ENST00000592927 SLC35C1Q96A29 364 aa12.79□□□□□ -0.36
DDX39A-219ENST00000592927 COL26A1Q96A83 441 aa12.79□□□□□ -0.36
DDX39A-219ENST00000592927 DDX27Q96GQ7 796 aaKnown RBP12.79□□□□□ -0.36
DDX39A-219ENST00000592927 UROC1Q96N76 676 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms