RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 TIGD1Q96MW7 591 aa15.13■□□□□ 0.01
SCAMP4-212ENST00000590266 PGLYRP2Q96PD5 576 aa15.13■□□□□ 0.01
SCAMP4-212ENST00000590266 PRKD2Q9BZL6 878 aa15.13■□□□□ 0.01
SCAMP4-212ENST00000590266 SIX4Q9UIU6 781 aa15.13■□□□□ 0.01
SCAMP4-212ENST00000590266 PCDHA5Q9Y5H7 936 aa15.13■□□□□ 0.01
SCAMP4-212ENST00000590266 ARHGEF37A1IGU5 675 aa15.12■□□□□ 0.01
SCAMP4-212ENST00000590266 C2CD4DB7Z1M9 353 aa15.12■□□□□ 0.01
SCAMP4-212ENST00000590266 LOC730098B7Z3J9 87 aa15.12■□□□□ 0.01
SCAMP4-212ENST00000590266 TBC1D4O60343 1298 aa15.12■□□□□ 0.01
SCAMP4-212ENST00000590266 PHACTR2O75167 634 aa15.12■□□□□ 0.01
SCAMP4-212ENST00000590266 TYMPP19971 482 aa15.12■□□□□ 0.01
SCAMP4-212ENST00000590266 PAX3P23760 479 aa15.12■□□□□ 0.01
SCAMP4-212ENST00000590266 NR2F2P24468 414 aa15.12■□□□□ 0.01
SCAMP4-212ENST00000590266 ADCY1Q08828 1119 aa15.12■□□□□ 0.01
SCAMP4-212ENST00000590266 MYO1EQ12965 1108 aa15.12■□□□□ 0.01
SCAMP4-212ENST00000590266 WSCD1Q658N2 575 aa15.12■□□□□ 0.01
SCAMP4-212ENST00000590266 RNF19BQ6ZMZ0 732 aa15.12■□□□□ 0.01
SCAMP4-212ENST00000590266 GET4Q7L5D6 327 aaPredicted RBP15.12■□□□□ 0.01
SCAMP4-212ENST00000590266 GRASPQ7Z6J2 395 aaPredicted RBP15.12■□□□□ 0.01
SCAMP4-212ENST00000590266 RNF135Q8IUD6 432 aa15.12■□□□□ 0.01
SCAMP4-212ENST00000590266 GUF1Q8N442 669 aaKnown RBP15.12■□□□□ 0.01
SCAMP4-212ENST00000590266 TDRD5Q8NAT2 981 aaKnown RBP15.12■□□□□ 0.01
SCAMP4-212ENST00000590266 ZNF461Q8TAF7 563 aa15.12■□□□□ 0.01
SCAMP4-212ENST00000590266 GSDMAQ96QA5 445 aa15.12■□□□□ 0.01
SCAMP4-212ENST00000590266 TMEM209Q96SK2 561 aa15.12■□□□□ 0.01
SCAMP4-212ENST00000590266 MUTYHQ9UIF7 546 aa15.12■□□□□ 0.01
SCAMP4-212ENST00000590266 DSEQ9UL01 958 aa15.12■□□□□ 0.01
SCAMP4-212ENST00000590266 FRMD4BQ9Y2L6 1034 aa15.12■□□□□ 0.01
SCAMP4-212ENST00000590266 SNX9Q9Y5X1 595 aa15.12■□□□□ 0.01
SCAMP4-212ENST00000590266 BRWD1Q9NSI6 2320 aa15.12■□□□□ 0.01
SCAMP4-212ENST00000590266 CLUHO75153 1309 aa15.12■□□□□ 0.01
SCAMP4-212ENST00000590266 OR6C75A6NL08 312 aa15.11■□□□□ 0.01
SCAMP4-212ENST00000590266 HUS1O60921 280 aa15.11■□□□□ 0.01
SCAMP4-212ENST00000590266 XYLBO75191 536 aa15.11■□□□□ 0.01
SCAMP4-212ENST00000590266 OAZ2O95190 189 aa15.11■□□□□ 0.01
SCAMP4-212ENST00000590266 SEC24AO95486 1093 aa15.11■□□□□ 0.01
SCAMP4-212ENST00000590266 C1RP00736 705 aa15.11■□□□□ 0.01
SCAMP4-212ENST00000590266 LRG1P02750 347 aa15.11■□□□□ 0.01
SCAMP4-212ENST00000590266 GBP2P32456 591 aaPredicted RBP15.11■□□□□ 0.01
SCAMP4-212ENST00000590266 UBE2HP62256 183 aa15.11■□□□□ 0.01
SCAMP4-212ENST00000590266 NTHL1P78549 312 aa15.11■□□□□ 0.01
SCAMP4-212ENST00000590266 BIRC3Q13489 604 aa15.11■□□□□ 0.01
SCAMP4-212ENST00000590266 ZNF658Q5TYW1 1059 aaPredicted RBP15.11■□□□□ 0.01
SCAMP4-212ENST00000590266 TRAPPC11Q7Z392 1133 aa15.11■□□□□ 0.01
SCAMP4-212ENST00000590266 THEM5Q8N1Q8 247 aa15.11■□□□□ 0.01
SCAMP4-212ENST00000590266 LRRC52Q8N7C0 313 aa15.11■□□□□ 0.01
SCAMP4-212ENST00000590266 EEF2KMTQ96G04 330 aa15.11■□□□□ 0.01
SCAMP4-212ENST00000590266 HPDLQ96IR7 371 aa15.11■□□□□ 0.01
SCAMP4-212ENST00000590266 MFSD14AQ96MC6 490 aa15.11■□□□□ 0.01
SCAMP4-212ENST00000590266 DMAC2Q9NW81 257 aa15.11■□□□□ 0.01
SCAMP4-212ENST00000590266 TRAF3IP3Q9Y228 551 aa15.11■□□□□ 0.01
SCAMP4-212ENST00000590266 LRRIQ3A6PVS8 624 aaPredicted RBP15.1■□□□□ 0.01
SCAMP4-212ENST00000590266 PRR33A8MZF0 331 aa15.1■□□□□ 0.01
SCAMP4-212ENST00000590266 BIN1O00499 593 aa15.1■□□□□ 0.01
SCAMP4-212ENST00000590266 ABLIM3O94929 683 aa15.1■□□□□ 0.01
SCAMP4-212ENST00000590266 CYP11A1P05108 521 aa15.1■□□□□ 0.01
SCAMP4-212ENST00000590266 HNRNPA1P09651 372 aaKnown RBP eCLIP15.1■□□□□ 0.01
SCAMP4-212ENST00000590266 ATF2P15336 505 aa15.1■□□□□ 0.01
SCAMP4-212ENST00000590266 PRCPP42785 496 aa15.1■□□□□ 0.01
SCAMP4-212ENST00000590266 TRPC3Q13507 836 aa15.1■□□□□ 0.01
SCAMP4-212ENST00000590266 CAMK4Q16566 473 aa15.1■□□□□ 0.01
SCAMP4-212ENST00000590266 SLC39A12Q504Y0 691 aa15.1■□□□□ 0.01
SCAMP4-212ENST00000590266 TPGS2Q68CL5 300 aa15.1■□□□□ 0.01
SCAMP4-212ENST00000590266 SLC9A9Q8IVB4 645 aa15.1■□□□□ 0.01
SCAMP4-212ENST00000590266 OR10T2Q8NGX3 314 aa15.1■□□□□ 0.01
SCAMP4-212ENST00000590266 CXorf38Q8TB03 319 aa15.1■□□□□ 0.01
SCAMP4-212ENST00000590266 PLEKHO2Q8TD55 490 aa15.1■□□□□ 0.01
SCAMP4-212ENST00000590266 ZNF516Q92618 1163 aa15.1■□□□□ 0.01
SCAMP4-212ENST00000590266 ACSF2Q96CM8 615 aaPredicted RBP15.1■□□□□ 0.01
SCAMP4-212ENST00000590266 BORCS6Q96GS4 357 aa15.1■□□□□ 0.01
SCAMP4-212ENST00000590266 MMS19Q96T76 1030 aa15.1■□□□□ 0.01
SCAMP4-212ENST00000590266 OXCT2Q9BYC2 517 aaPredicted RBP15.1■□□□□ 0.01
SCAMP4-212ENST00000590266 WDR6Q9NNW5 1121 aaKnown RBP15.1■□□□□ 0.01
SCAMP4-212ENST00000590266 HCFC1R1Q9NWW0 138 aa15.1■□□□□ 0.01
SCAMP4-212ENST00000590266 AFF4Q9UHB7 1163 aaKnown RBP15.1■□□□□ 0.01
SCAMP4-212ENST00000590266 L1RE1Q9UN81 338 aa15.1■□□□□ 0.01
SCAMP4-212ENST00000590266 CST3P01034 146 aaPredicted RBP15.09■□□□□ 0.01
SCAMP4-212ENST00000590266 RPL13P26373 211 aaKnown RBP15.09■□□□□ 0.01
SCAMP4-212ENST00000590266 HOXA9P31269 272 aa15.09■□□□□ 0.01
SCAMP4-212ENST00000590266 PLA2G5P39877 138 aa15.09■□□□□ 0.01
SCAMP4-212ENST00000590266 DLG4P78352 724 aa15.09■□□□□ 0.01
SCAMP4-212ENST00000590266 TWF1Q12792 350 aa15.09■□□□□ 0.01
SCAMP4-212ENST00000590266 ADAM9Q13443 819 aa15.09■□□□□ 0.01
SCAMP4-212ENST00000590266 UVSSAQ2YD98 709 aa15.09■□□□□ 0.01
SCAMP4-212ENST00000590266 CYP26C1Q6V0L0 522 aa15.09■□□□□ 0.01
SCAMP4-212ENST00000590266 OTOP3Q7RTS5 596 aa15.09■□□□□ 0.01
SCAMP4-212ENST00000590266 FAM186BQ8IYM0 893 aa15.09■□□□□ 0.01
SCAMP4-212ENST00000590266 ADGRF2Q8IZF7 708 aa15.09■□□□□ 0.01
SCAMP4-212ENST00000590266 PDCL2Q8N4E4 241 aa15.09■□□□□ 0.01
SCAMP4-212ENST00000590266 PARD3BQ8TEW8 1205 aa15.09■□□□□ 0.01
SCAMP4-212ENST00000590266 IPO9Q96P70 1041 aaKnown RBP15.09■□□□□ 0.01
SCAMP4-212ENST00000590266 TSG101Q99816 390 aa15.09■□□□□ 0.01
SCAMP4-212ENST00000590266 GZF1Q9H116 711 aaPredicted RBP15.09■□□□□ 0.01
SCAMP4-212ENST00000590266 MMRN2Q9H8L6 949 aa15.09■□□□□ 0.01
SCAMP4-212ENST00000590266 LIMD1Q9UGP4 676 aa15.09■□□□□ 0.01
SCAMP4-212ENST00000590266 MAN1B1Q9UKM7 699 aa15.09■□□□□ 0.01
SCAMP4-212ENST00000590266 SLC27A5Q9Y2P5 690 aa15.09■□□□□ 0.01
SCAMP4-212ENST00000590266 INSL5Q9Y5Q6 135 aa15.09■□□□□ 0.01
SCAMP4-212ENST00000590266 SOAT2O75908 522 aa15.08■□□□□ 0
SCAMP4-212ENST00000590266 AKAP3O75969 853 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms