RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 PBXIP1Q96AQ6 731 aa13.04□□□□□ -0.32
TPM4-212ENST00000590180 ANKRD36BP1Q96IX9 119 aa13.04□□□□□ -0.32
TPM4-212ENST00000590180 FAM84AQ96KN4 292 aa13.04□□□□□ -0.32
TPM4-212ENST00000590180 ZNF560Q96MR9 790 aa13.04□□□□□ -0.32
TPM4-212ENST00000590180 PGLYRP2Q96PD5 576 aa13.04□□□□□ -0.32
TPM4-212ENST00000590180 KCNK12Q9HB15 430 aa13.04□□□□□ -0.32
TPM4-212ENST00000590180 HCFC1R1Q9NWW0 138 aa13.04□□□□□ -0.32
TPM4-212ENST00000590180 DNMT3BQ9UBC3 853 aaKnown RBP13.04□□□□□ -0.32
TPM4-212ENST00000590180 RAPGEFL1Q9UHV5 662 aa13.04□□□□□ -0.32
TPM4-212ENST00000590180 DSEQ9UL01 958 aa13.04□□□□□ -0.32
TPM4-212ENST00000590180 UBE4BO95155 1302 aa13.04□□□□□ -0.32
TPM4-212ENST00000590180 MUC3AQ02505 3323 aa13.03□□□□□ -0.32
TPM4-212ENST00000590180 DOCK6Q96HP0 2047 aa13.03□□□□□ -0.32
TPM4-212ENST00000590180 TECTAO75443 2155 aa13.03□□□□□ -0.32
TPM4-212ENST00000590180 EXOC3O60645 756 aa13.03□□□□□ -0.32
TPM4-212ENST00000590180 N4BP1O75113 896 aaKnown RBP13.03□□□□□ -0.32
TPM4-212ENST00000590180 TNNC2P02585 160 aa13.03□□□□□ -0.32
TPM4-212ENST00000590180 LAMP2P13473 410 aa13.03□□□□□ -0.32
TPM4-212ENST00000590180 TNNI1P19237 187 aa13.03□□□□□ -0.32
TPM4-212ENST00000590180 PNPLA4P41247 253 aa13.03□□□□□ -0.32
TPM4-212ENST00000590180 BFSP1Q12934 665 aa13.03□□□□□ -0.32
TPM4-212ENST00000590180 BMT2Q1RMZ1 405 aa13.03□□□□□ -0.32
TPM4-212ENST00000590180 PABPC1LQ4VXU2 614 aaKnown RBP13.03□□□□□ -0.32
TPM4-212ENST00000590180 WSCD1Q658N2 575 aa13.03□□□□□ -0.32
TPM4-212ENST00000590180 KRBA2Q6ZNG9 492 aa13.03□□□□□ -0.32
TPM4-212ENST00000590180 UBALD2Q8IYN6 164 aa13.03□□□□□ -0.32
TPM4-212ENST00000590180 ELMOD1Q8N336 334 aa13.03□□□□□ -0.32
TPM4-212ENST00000590180 C1orf127Q8N9H9 656 aa13.03□□□□□ -0.32
TPM4-212ENST00000590180 XXYLT1Q8NBI6 393 aa13.03□□□□□ -0.32
TPM4-212ENST00000590180 ST13P5Q8NFI4 369 aaPredicted RBP13.03□□□□□ -0.32
TPM4-212ENST00000590180 RSAD2Q8WXG1 361 aa13.03□□□□□ -0.32
TPM4-212ENST00000590180 CCDC127Q96BQ5 260 aa13.03□□□□□ -0.32
TPM4-212ENST00000590180 BORCS6Q96GS4 357 aa13.03□□□□□ -0.32
TPM4-212ENST00000590180 CCDC34Q96HJ3 373 aa13.03□□□□□ -0.32
TPM4-212ENST00000590180 MFSD14AQ96MC6 490 aa13.03□□□□□ -0.32
TPM4-212ENST00000590180 ZNF512Q96ME7 567 aaPredicted RBP13.03□□□□□ -0.32
TPM4-212ENST00000590180 FNBP1Q96RU3 617 aa13.03□□□□□ -0.32
TPM4-212ENST00000590180 GOLPH3LQ9H4A5 285 aa13.03□□□□□ -0.32
TPM4-212ENST00000590180 INTS13Q9NVM9 706 aa13.03□□□□□ -0.32
TPM4-212ENST00000590180 IGSF9Q9P2J2 1179 aa13.03□□□□□ -0.32
TPM4-212ENST00000590180 CGNQ9P2M7 1197 aaKnown RBP13.03□□□□□ -0.32
TPM4-212ENST00000590180 MAFFQ9ULX9 164 aa13.03□□□□□ -0.32
TPM4-212ENST00000590180 SLC27A5Q9Y2P5 690 aa13.03□□□□□ -0.32
TPM4-212ENST00000590180 MRPS23Q9Y3D9 190 aaKnown RBP13.03□□□□□ -0.32
TPM4-212ENST00000590180 TCHHQ07283 1943 aa13.03□□□□□ -0.32
TPM4-212ENST00000590180 CYP11A1P05108 521 aa13.02□□□□□ -0.33
TPM4-212ENST00000590180 PRR29P0C7W0 189 aa13.02□□□□□ -0.33
TPM4-212ENST00000590180 DLATP10515 647 aaKnown RBP13.02□□□□□ -0.33
TPM4-212ENST00000590180 CDR1P51861 262 aa13.02□□□□□ -0.33
TPM4-212ENST00000590180 TWF1Q12792 350 aa13.02□□□□□ -0.33
TPM4-212ENST00000590180 DUSP4Q13115 394 aa13.02□□□□□ -0.33
TPM4-212ENST00000590180 GPR17Q13304 367 aa13.02□□□□□ -0.33
TPM4-212ENST00000590180 TDGQ13569 410 aa13.02□□□□□ -0.33
TPM4-212ENST00000590180 MYBPC2Q14324 1141 aa13.02□□□□□ -0.33
TPM4-212ENST00000590180 SNRNP35Q16560 246 aaKnown RBP13.02□□□□□ -0.33
TPM4-212ENST00000590180 SCARA3Q6AZY7 606 aa13.02□□□□□ -0.33
TPM4-212ENST00000590180 IQCEQ6IPM2 695 aa13.02□□□□□ -0.33
TPM4-212ENST00000590180 HFE2Q6ZVN8 426 aa13.02□□□□□ -0.33
TPM4-212ENST00000590180 OR5B17Q8NGF7 314 aa13.02□□□□□ -0.33
TPM4-212ENST00000590180 ITFG1Q8TB96 612 aa13.02□□□□□ -0.33
TPM4-212ENST00000590180 GOLGA5Q8TBA6 731 aa13.02□□□□□ -0.33
TPM4-212ENST00000590180 TMEM209Q96SK2 561 aa13.02□□□□□ -0.33
TPM4-212ENST00000590180 CORO1BQ9BR76 489 aa13.02□□□□□ -0.33
TPM4-212ENST00000590180 MTMR12Q9C0I1 747 aa13.02□□□□□ -0.33
TPM4-212ENST00000590180 SMOC2Q9H3U7 446 aa13.02□□□□□ -0.33
TPM4-212ENST00000590180 EPS15L1Q9UBC2 864 aa13.02□□□□□ -0.33
TPM4-212ENST00000590180 ITGA11Q9UKX5 1188 aa13.02□□□□□ -0.33
TPM4-212ENST00000590180 CDH7Q9ULB5 785 aa13.02□□□□□ -0.33
TPM4-212ENST00000590180 INSL5Q9Y5Q6 135 aa13.02□□□□□ -0.33
TPM4-212ENST00000590180 PDCD11Q14690 1871 aaKnown RBP13.02□□□□□ -0.33
TPM4-212ENST00000590180 HUS1O60921 280 aa13.01□□□□□ -0.33
TPM4-212ENST00000590180 RHOP08100 348 aa13.01□□□□□ -0.33
TPM4-212ENST00000590180 POU2F2P09086 479 aa13.01□□□□□ -0.33
TPM4-212ENST00000590180 ALDH1A3P47895 512 aa13.01□□□□□ -0.33
TPM4-212ENST00000590180 CYP24A1Q07973 514 aa13.01□□□□□ -0.33
TPM4-212ENST00000590180 MYO1EQ12965 1108 aa13.01□□□□□ -0.33
TPM4-212ENST00000590180 SLC39A12Q504Y0 691 aa13.01□□□□□ -0.33
TPM4-212ENST00000590180 CYP4A22Q5TCH4 519 aa13.01□□□□□ -0.33
TPM4-212ENST00000590180 CENPPQ6IPU0 288 aa13.01□□□□□ -0.33
TPM4-212ENST00000590180 SLC44A3Q8N4M1 653 aa13.01□□□□□ -0.33
TPM4-212ENST00000590180 LRRC52Q8N7C0 313 aa13.01□□□□□ -0.33
TPM4-212ENST00000590180 ATAD1Q8NBU5 361 aa13.01□□□□□ -0.33
TPM4-212ENST00000590180 KIAA0895Q8NCT3 520 aa13.01□□□□□ -0.33
TPM4-212ENST00000590180 ING5Q8WYH8 240 aa13.01□□□□□ -0.33
TPM4-212ENST00000590180 FGF13Q92913 245 aa13.01□□□□□ -0.33
TPM4-212ENST00000590180 NXPE3Q969Y0 559 aa13.01□□□□□ -0.33
TPM4-212ENST00000590180 MCRS1Q96EZ8 462 aa13.01□□□□□ -0.33
TPM4-212ENST00000590180 HCN4Q9Y3Q4 1203 aa13.01□□□□□ -0.33
TPM4-212ENST00000590180 SNX9Q9Y5X1 595 aa13.01□□□□□ -0.33
TPM4-212ENST00000590180 ZFP37Q9Y6Q3 630 aaPredicted RBP13.01□□□□□ -0.33
TPM4-212ENST00000590180 C2orf16Q68DN1 1984 aa13.01□□□□□ -0.33
TPM4-212ENST00000590180 SCN1AP35498 2009 aa13.01□□□□□ -0.33
TPM4-212ENST00000590180 ZDBF2Q9HCK1 2354 aa13□□□□□ -0.33
TPM4-212ENST00000590180 ZNF197O14709 1029 aa13□□□□□ -0.33
TPM4-212ENST00000590180 PRPF40AO75400 957 aaKnown RBP13□□□□□ -0.33
TPM4-212ENST00000590180 KIF20AO95235 890 aa13□□□□□ -0.33
TPM4-212ENST00000590180 MYL4P12829 197 aa13□□□□□ -0.33
TPM4-212ENST00000590180 EPHB3P54753 998 aa13□□□□□ -0.33
TPM4-212ENST00000590180 DPYDQ12882 1025 aa13□□□□□ -0.33
TPM4-212ENST00000590180 PSMD6Q15008 389 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms