RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 RRAGAQ7L523 313 aa16.27■□□□□ 0.2
ATG4D-211ENST00000589753 DPH6Q7L8W6 267 aa16.27■□□□□ 0.2
ATG4D-211ENST00000589753 SPRED2Q7Z698 418 aa16.27■□□□□ 0.2
ATG4D-211ENST00000589753 DDX53Q86TM3 631 aaKnown RBP16.27■□□□□ 0.2
ATG4D-211ENST00000589753 TOP6BLQ8N6T0 577 aa16.27■□□□□ 0.2
ATG4D-211ENST00000589753 TIFAQ96CG3 184 aa16.27■□□□□ 0.2
ATG4D-211ENST00000589753 MRFAP1L1Q96HT8 127 aa16.27■□□□□ 0.2
ATG4D-211ENST00000589753 FAM81BQ96LP2 452 aa16.27■□□□□ 0.2
ATG4D-211ENST00000589753 C11orf84Q9BUA3 381 aaPredicted RBP16.27■□□□□ 0.2
ATG4D-211ENST00000589753 BCO2Q9BYV7 579 aa16.27■□□□□ 0.2
ATG4D-211ENST00000589753 UBE2TQ9NPD8 197 aaPredicted RBP16.27■□□□□ 0.2
ATG4D-211ENST00000589753 STK39Q9UEW8 545 aa16.27■□□□□ 0.2
ATG4D-211ENST00000589753 DSEQ9UL01 958 aa16.27■□□□□ 0.2
ATG4D-211ENST00000589753 PCDHB8Q9UN66 801 aa16.27■□□□□ 0.2
ATG4D-211ENST00000589753 SYN3O14994 580 aa16.26■□□□□ 0.19
ATG4D-211ENST00000589753 UCHL3P15374 230 aa16.26■□□□□ 0.19
ATG4D-211ENST00000589753 TYMPP19971 482 aa16.26■□□□□ 0.19
ATG4D-211ENST00000589753 RFX1P22670 979 aa16.26■□□□□ 0.19
ATG4D-211ENST00000589753 SOWAHAQ2M3V2 549 aa16.26■□□□□ 0.19
ATG4D-211ENST00000589753 GJB7Q6PEY0 223 aa16.26■□□□□ 0.19
ATG4D-211ENST00000589753 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.26■□□□□ 0.19
ATG4D-211ENST00000589753 LIMS2Q7Z4I7 341 aa16.26■□□□□ 0.19
ATG4D-211ENST00000589753 VSTM4Q8IW00 320 aa16.26■□□□□ 0.19
ATG4D-211ENST00000589753 RNF168Q8IYW5 571 aaPredicted RBP16.26■□□□□ 0.19
ATG4D-211ENST00000589753 TMEM86AQ8N2M4 240 aa16.26■□□□□ 0.19
ATG4D-211ENST00000589753 PDCL2Q8N4E4 241 aa16.26■□□□□ 0.19
ATG4D-211ENST00000589753 VN1R3Q9BXE9 311 aa16.26■□□□□ 0.19
ATG4D-211ENST00000589753 GANQ9H2C0 597 aa16.26■□□□□ 0.19
ATG4D-211ENST00000589753 SMYD3Q9H7B4 428 aa16.26■□□□□ 0.19
ATG4D-211ENST00000589753 CYP3A43Q9HB55 503 aa16.26■□□□□ 0.19
ATG4D-211ENST00000589753 DNAJC12Q9UKB3 198 aa16.26■□□□□ 0.19
ATG4D-211ENST00000589753 L1RE1Q9UN81 338 aa16.26■□□□□ 0.19
ATG4D-211ENST00000589753 DAAM1Q9Y4D1 1078 aa16.26■□□□□ 0.19
ATG4D-211ENST00000589753 TIMM13Q9Y5L4 95 aaPredicted RBP16.26■□□□□ 0.19
ATG4D-211ENST00000589753 ITIH6Q6UXX5 1313 aa16.25■□□□□ 0.19
ATG4D-211ENST00000589753 EPHB6O15197 1021 aa16.25■□□□□ 0.19
ATG4D-211ENST00000589753 TACC1O75410 805 aa16.25■□□□□ 0.19
ATG4D-211ENST00000589753 NOL4O94818 638 aa16.25■□□□□ 0.19
ATG4D-211ENST00000589753 ADCY5O95622 1261 aa16.25■□□□□ 0.19
ATG4D-211ENST00000589753 SOD2P04179 222 aa16.25■□□□□ 0.19
ATG4D-211ENST00000589753 CYP11A1P05108 521 aa16.25■□□□□ 0.19
ATG4D-211ENST00000589753 WEE2P0C1S8 567 aa16.25■□□□□ 0.19
ATG4D-211ENST00000589753 FAM163BP0C2L3 166 aa16.25■□□□□ 0.19
ATG4D-211ENST00000589753 TRIM21P19474 475 aaKnown RBP16.25■□□□□ 0.19
ATG4D-211ENST00000589753 FGFR3P22607 806 aa16.25■□□□□ 0.19
ATG4D-211ENST00000589753 TKTP29401 623 aaKnown RBP16.25■□□□□ 0.19
ATG4D-211ENST00000589753 RAP1GAPP47736 663 aa16.25■□□□□ 0.19
ATG4D-211ENST00000589753 MFAP3P55082 362 aa16.25■□□□□ 0.19
ATG4D-211ENST00000589753 USP41Q3LFD5 358 aa16.25■□□□□ 0.19
ATG4D-211ENST00000589753 WSCD1Q658N2 575 aa16.25■□□□□ 0.19
ATG4D-211ENST00000589753 IQCEQ6IPM2 695 aa16.25■□□□□ 0.19
ATG4D-211ENST00000589753 ENOSF1Q7L5Y1 443 aa16.25■□□□□ 0.19
ATG4D-211ENST00000589753 TAS1R1Q7RTX1 841 aa16.25■□□□□ 0.19
ATG4D-211ENST00000589753 METTL23Q86XA0 190 aa16.25■□□□□ 0.19
ATG4D-211ENST00000589753 CEP57Q86XR8 500 aa16.25■□□□□ 0.19
ATG4D-211ENST00000589753 ADGRF2Q8IZF7 708 aa16.25■□□□□ 0.19
ATG4D-211ENST00000589753 FBXO22Q8NEZ5 403 aa16.25■□□□□ 0.19
ATG4D-211ENST00000589753 KAT5Q92993 513 aa16.25■□□□□ 0.19
ATG4D-211ENST00000589753 ARID3AQ99856 593 aa16.25■□□□□ 0.19
ATG4D-211ENST00000589753 TTPALQ9BTX7 342 aa16.25■□□□□ 0.19
ATG4D-211ENST00000589753 NUP58Q9BVL2 599 aa16.25■□□□□ 0.19
ATG4D-211ENST00000589753 HERC2P3Q9BVR0 1158 aa16.25■□□□□ 0.19
ATG4D-211ENST00000589753 SDCBP2Q9H190 292 aa16.25■□□□□ 0.19
ATG4D-211ENST00000589753 PUF60Q9UHX1 559 aaKnown RBP16.25■□□□□ 0.19
ATG4D-211ENST00000589753 FBXL5Q9UKA1 691 aa16.25■□□□□ 0.19
ATG4D-211ENST00000589753 LZTS1Q9Y250 596 aa16.25■□□□□ 0.19
ATG4D-211ENST00000589753 FHOD1Q9Y613 1164 aa16.25■□□□□ 0.19
ATG4D-211ENST00000589753 CDH8P55286 799 aa16.24■□□□□ 0.19
ATG4D-211ENST00000589753 POLR2FP61218 127 aaKnown RBP16.24■□□□□ 0.19
ATG4D-211ENST00000589753 YWHAEP62258 255 aaKnown RBP16.24■□□□□ 0.19
ATG4D-211ENST00000589753 UBE3AQ05086 875 aa16.24■□□□□ 0.19
ATG4D-211ENST00000589753 ARHGAP44Q17R89 818 aa16.24■□□□□ 0.19
ATG4D-211ENST00000589753 FIGNQ5HY92 759 aa16.24■□□□□ 0.19
ATG4D-211ENST00000589753 SPECC1LQ69YQ0 1117 aa16.24■□□□□ 0.19
ATG4D-211ENST00000589753 KIAA1841Q6NSI8 718 aa16.24■□□□□ 0.19
ATG4D-211ENST00000589753 VPS52Q8N1B4 723 aa16.24■□□□□ 0.19
ATG4D-211ENST00000589753 TTC39CQ8N584 583 aa16.24■□□□□ 0.19
ATG4D-211ENST00000589753 SPATA18Q8TC71 538 aa16.24■□□□□ 0.19
ATG4D-211ENST00000589753 KBTBD7Q8WVZ9 684 aa16.24■□□□□ 0.19
ATG4D-211ENST00000589753 JAKMIP2Q96AA8 810 aa16.24■□□□□ 0.19
ATG4D-211ENST00000589753 IQCDQ96DY2 449 aa16.24■□□□□ 0.19
ATG4D-211ENST00000589753 B3GALT6Q96L58 329 aa16.24■□□□□ 0.19
ATG4D-211ENST00000589753 KREMEN1Q96MU8 473 aa16.24■□□□□ 0.19
ATG4D-211ENST00000589753 MRPL45Q9BRJ2 306 aaKnown RBP16.24■□□□□ 0.19
ATG4D-211ENST00000589753 NAA15Q9BXJ9 866 aaKnown RBP16.24■□□□□ 0.19
ATG4D-211ENST00000589753 FAM124BQ9H5Z6 455 aaPredicted RBP16.24■□□□□ 0.19
ATG4D-211ENST00000589753 CERS4Q9HA82 394 aa16.24■□□□□ 0.19
ATG4D-211ENST00000589753 ALG13Q9NP73 1137 aaKnown RBP16.24■□□□□ 0.19
ATG4D-211ENST00000589753 CEP72Q9P209 647 aa16.24■□□□□ 0.19
ATG4D-211ENST00000589753 AJAP1Q9UKB5 411 aaPredicted RBP16.24■□□□□ 0.19
ATG4D-211ENST00000589753 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.24■□□□□ 0.19
ATG4D-211ENST00000589753 H3BNC9 293 aa16.23■□□□□ 0.19
ATG4D-211ENST00000589753 CD58P19256 250 aa16.23■□□□□ 0.19
ATG4D-211ENST00000589753 WARSP23381 471 aaKnown RBP16.23■□□□□ 0.19
ATG4D-211ENST00000589753 LHX1P48742 406 aa16.23■□□□□ 0.19
ATG4D-211ENST00000589753 GLUD2P49448 558 aa16.23■□□□□ 0.19
ATG4D-211ENST00000589753 YWHAHQ04917 246 aaPredicted RBP16.23■□□□□ 0.19
ATG4D-211ENST00000589753 GPM6BQ13491 265 aa16.23■□□□□ 0.19
ATG4D-211ENST00000589753 RAPGEF1Q13905 1077 aa16.23■□□□□ 0.19
ATG4D-211ENST00000589753 RTP2Q5QGT7 225 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms